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FFCP PHASE1:Mm9::chr17:17539647..17539735,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:17539647..17539735,+
|DHSsupport=NA
|short_description=p1@Lix1
|DPIdataset=NA
|description=CAGE_peak_1_at_Lix1_5end
|association_with_transcript=0bp_to_ENSMUST00000172213,NM_025681,uc008apg.1_5end
|EntrezGene=66643
|EntrezGene=66643
|HGNC=
|HGNC=
|MCL_coexpression_id=624
|TSSclassifier=NA
|UniProt=E9Q1B6,Q6P566
|UniProt=E9Q1B6,Q6P566
|association_with_transcript=0bp_to_ENSMUST00000172213,NM_025681,uc008apg.1_5end
|cluster_id=chr17:17539647..17539735,+
|description=CAGE_peak_1_at_Lix1_5end
|id=chr17:17539647..17539735,+
|ontology_enrichment_celltype=CL:0002319!1.03e-10!43;CL:0000221!1.45e-10!44;CL:0000133!1.45e-10!44;CL:0000117!1.75e-10!23;CL:0000337!1.75e-10!23;CL:0000540!1.47e-09!33;CL:0000047!1.47e-09!33;CL:0000031!1.47e-09!33;CL:0000404!1.47e-09!33;CL:0000055!2.80e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,8.75e-12,23;CL:0000337,8.75e-12,23;CL:0002319,9.49e-11,43;CL:0000221,3.37e-10,44;CL:0000133,3.37e-10,44;CL:0000540,3.35e-09,33;CL:0000047,3.35e-09,33;CL:0000031,3.35e-09,33;CL:0000404,3.35e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.46e-28!102;UBERON:0000924!5.46e-28!102;UBERON:0006601!5.46e-28!102;UBERON:0002346!1.18e-27!71;UBERON:0003075!1.18e-27!71;UBERON:0007284!1.18e-27!71;UBERON:0000073!1.78e-27!75;UBERON:0001016!1.78e-27!75;UBERON:0001017!9.42e-27!73;UBERON:0005743!9.42e-27!73;UBERON:0001049!6.65e-24!52;UBERON:0005068!6.65e-24!52;UBERON:0006241!6.65e-24!52;UBERON:0007135!6.65e-24!52;UBERON:0000955!3.19e-23!50;UBERON:0006238!3.19e-23!50;UBERON:0000033!3.24e-23!63;UBERON:0002616!2.00e-22!49;UBERON:0003056!3.25e-21!49;UBERON:0003080!1.81e-19!40;UBERON:0002020!5.25e-19!34;UBERON:0002780!8.72e-19!39;UBERON:0001890!8.72e-19!39;UBERON:0006240!8.72e-19!39;UBERON:0002791!1.68e-16!29;UBERON:0003528!1.68e-16!29;UBERON:0001893!1.68e-16!29;UBERON:0000956!9.76e-14!21;UBERON:0001869!9.76e-14!21;UBERON:0000203!9.76e-14!21;UBERON:0000153!9.73e-12!94;UBERON:0002619!3.69e-11!17;UBERON:0007811!8.82e-10!86;UBERON:0002021!2.63e-08!10;UBERON:0000411!2.63e-08!10;UBERON:0001950!2.63e-08!10;UBERON:0000468!5.65e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.64e-29,75;UBERON:0000073,7.48e-29,54;UBERON:0001017,1.09e-28,73;UBERON:0002346,1.12e-28,64;UBERON:0003075,1.12e-28,64;UBERON:0007284,1.12e-28,64;UBERON:0001049,2.05e-27,52;UBERON:0005068,2.05e-27,52;UBERON:0006241,2.05e-27,52;UBERON:0007135,2.05e-27,52;UBERON:0004121,2.05e-25,95;UBERON:0000924,2.05e-25,95;UBERON:0006601,2.05e-25,95;UBERON:0000955,1.53e-24,47;UBERON:0006238,1.53e-24,47;UBERON:0003056,4.35e-24,49;UBERON:0002616,1.22e-23,46;UBERON:0010371,1.87e-22,73;UBERON:0003080,4.37e-22,40;UBERON:0002020,1.49e-21,34;UBERON:0002780,2.66e-21,39;UBERON:0001890,2.66e-21,39;UBERON:0006240,2.66e-21,39;UBERON:0003528,1.11e-18,29;UBERON:0002791,1.11e-18,29;UBERON:0001893,1.11e-18,29;UBERON:0010314,1.76e-17,92;UBERON:0000956,1.64e-15,21;UBERON:0001869,1.64e-15,21;UBERON:0000203,1.64e-15,21;UBERON:0002619,1.47e-12,17;UBERON:0002021,2.72e-09,10;UBERON:0000411,2.72e-09,10;UBERON:0001950,2.72e-09,10
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63337663178344,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,3.2703773457067,2.63623419281366,2.91644848611425,1.25987779462826,2.87505128729943,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.26766280701236,0.338844532069132,0,0,0,0,2.09720077362883,8.06858441175265,28.4109537725229,33.0764548912642,28.604194743788,8.85518051651791,8.39300455616131,9.0643191419066,7.66763768145891,10.1114066527102,8.8092704799511,21.068410784056,21.3513081226178,1.18697658957174,2.19570344645783,5.2091337055676,21.217907924105,18.0084035210138,30.2540530598084,8.54422897873636,9.25415925194169,6.15118171223492,2.04460721999597,10.7311615351635,0,0,0,0,0,0,2.80888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,1.02765491747154,0,2.52351636410202,3.46970653532272,7.00270600117925,6.91846491768175,7.68685466818375,1.52865319276416,2.26199864393416,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0,1.86391761218122,3.80615036115011,5.02672096352292,0.255457055208591,0,0,0,35.500381538943,26.5350349634803,3.64397621127307,50.2352285355679,53.9559614966997,30.3370545056958,27.7432559845866,1.42575109390443,2.36373244159177,3.79084137650512,2.73574412652416,4.29397461776922,1.14951052216736,1.98068342785884,3.0140963567143,2.72145996605311,3.33095672740609,3.27956035959051,6.20888089773638,40.0956466855087,21.1798809787958,8.97350733236139,5.91828477554452,8.06337022754234,1.74126083261083,2.46938563689532,1.79130840136644,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0.658650345873152,0.536825675041487,57.6194459065709,38.2805158050938,0,0,13.4371597837197,2.32236671860439,1.28867461322093,0.605050573870028,1.33426826306922,0.951128130562796,0,1.4822905925161,0.754005626400808,0.994782360205754,2.14460495831032,1.79763881730844,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,0.203651327845314,0.775809948670503,1.1221731182451,1.07502113111237,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,1.13694847062291,0.325929952884052,0,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0.275936746304732,15.0917554588524,14.7686725106176,0,0.252470927204373,0.315508219416257,1.56175497718655,1.29254038639679,0.238968797952552,2.45078541490634,1.13230612315533,0.809621403349789,4.9683495844923,1.97643888973262,132.705703682206,2.41298144854057,0.712262414669021,0.81443479676788,0.989820737835213,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0,0,0,0,1.02131881726136,2.16073312837572,2.32845630808958,1.92903331528433,3.90148514013002,3.92411398724555,5.92376474167636,3.04464949114599,0,0.42366414172764,1.10264199027481,0,0.968786560175433,1.32688434841943,0.954978752025092,0.492422699235184,0.582961673259701,13.1651964427462,0,0,0.370389054739423,0,0,0,0,0,0,0.954670618015114,8.38290382990009,1.42323626988794,1.83609079397062,1.67270636811575,1.9652630737156,1.75323650300267,2.23164330458407,2.35580347785627,0.777689839750757,0,0,1.04661582230785,1.15820943319968,1.94451188344048,0.645799117388655,0.675824501963113,0.821500670520278,1.17183946359555,0.524296722128554,0,0.576060012515731,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,1.54551675225752,0.187682475451182,0.915758121336325,0.214368379079066,0,59.8636953174091,75.9536640236842,73.3306257202428,55.6804310793548,36.9944560676147,35.5035131773159,42.5264175146038,39.1779446805072,33.9856806738153,37.278742446131,21.7953429926771,9.97562183502578,5.46347538413229,2.91728060481953,4.40187641518763,2.20612210140017,4.4449345560323,3.09052585858341,3.20919209591815,2.52697211763797,4.56262739802432,3.77252682772152,4.12022632867483,4.22566005872137,3.38869266838118,4.28664322154766,3.59241410429052,2.89363830695558,4.12085900803307,3.09117732282234,3.77156177623957,3.19456451086807,3.57654284920981,3.34296758254356,3.76437521661322,3.38458431566706,3.10977553883713,4.20911538300549,2.98769050460896,2.80571135828869,2.37270036248348,2.26560309463796,2.86461730218783,2.32405261778949,3.47231899766054,4.99621155875892,3.50897412668113,1.50409737833809,3.63447830930802,1.98532277207564,2.78241402744506
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63337663178344,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,3.2703773457067,2.63623419281366,2.91644848611425,1.25987779462826,2.87505128729943,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.26766280701236,0.338844532069132,0,0,0,0,2.09720077362883,8.06858441175265,28.4109537725229,33.0764548912642,28.604194743788,8.85518051651791,8.39300455616131,9.0643191419066,7.66763768145891,10.1114066527102,8.8092704799511,21.068410784056,21.3513081226178,1.18697658957174,2.19570344645783,5.2091337055676,21.217907924105,18.0084035210138,30.2540530598084,8.54422897873636,9.25415925194169,6.15118171223492,2.04460721999597,10.7311615351635,0,0,0,0,0,0,2.80888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,1.02765491747154,0,2.52351636410202,3.46970653532272,7.00270600117925,6.91846491768175,7.68685466818375,1.52865319276416,2.26199864393416,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0,1.86391761218122,3.80615036115011,5.02672096352292,0.255457055208591,0,0,0,35.500381538943,26.5350349634803,3.64397621127307,50.2352285355679,53.9559614966997,30.3370545056958,27.7432559845866,1.42575109390443,2.36373244159177,3.79084137650512,2.73574412652416,4.29397461776922,1.14951052216736,1.98068342785884,3.0140963567143,2.72145996605311,3.33095672740609,3.27956035959051,6.20888089773638,40.0956466855087,21.1798809787958,8.97350733236139,5.91828477554452,8.06337022754234,1.74126083261083,2.46938563689532,1.79130840136644,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0.658650345873152,0.536825675041487,57.6194459065709,38.2805158050938,0,0,13.4371597837197,2.32236671860439,1.28867461322093,0.605050573870028,1.33426826306922,0.951128130562796,0,1.4822905925161,0.754005626400808,0.994782360205754,2.14460495831032,1.79763881730844,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,0.203651327845314,0.775809948670503,1.1221731182451,1.07502113111237,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,1.13694847062291,0.325929952884052,0,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0.275936746304732,15.0917554588524,14.7686725106176,0,0.252470927204373,0.315508219416257,1.56175497718655,1.29254038639679,0.238968797952552,2.45078541490634,1.13230612315533,0.809621403349789,4.9683495844923,1.97643888973262,132.705703682206,2.41298144854057,0.712262414669021,0.81443479676788,0.989820737835213,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0,0,0,0,1.02131881726136,2.16073312837572,2.32845630808958,1.92903331528433,3.90148514013002,3.92411398724555,5.92376474167636,3.04464949114599,0,0.42366414172764,1.10264199027481,0,0.968786560175433,1.32688434841943,0.954978752025092,0.492422699235184,0.582961673259701,13.1651964427462,0,0,0.370389054739423,0,0,0,0,0,0,0.954670618015114,8.38290382990009,1.42323626988794,1.83609079397062,1.67270636811575,1.9652630737156,1.75323650300267,2.23164330458407,2.35580347785627,0.777689839750757,0,0,1.04661582230785,1.15820943319968,1.94451188344048,0.645799117388655,0.675824501963113,0.821500670520278,1.17183946359555,0.524296722128554,0,0.576060012515731,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,1.54551675225752,0.187682475451182,0.915758121336325,0.214368379079066,0,59.8636953174091,75.9536640236842,73.3306257202428,55.6804310793548,36.9944560676147,35.5035131773159,42.5264175146038,39.1779446805072,33.9856806738153,37.278742446131,21.7953429926771,9.97562183502578,5.46347538413229,2.91728060481953,4.40187641518763,2.20612210140017,4.4449345560323,3.09052585858341,3.20919209591815,2.52697211763797,4.56262739802432,3.77252682772152,4.12022632867483,4.22566005872137,3.38869266838118,4.28664322154766,3.59241410429052,2.89363830695558,4.12085900803307,3.09117732282234,3.77156177623957,3.19456451086807,3.57654284920981,3.34296758254356,3.76437521661322,3.38458431566706,3.10977553883713,4.20911538300549,2.98769050460896,2.80571135828869,2.37270036248348,2.26560309463796,2.86461730218783,2.32405261778949,3.47231899766054,4.99621155875892,3.50897412668113,1.50409737833809,3.63447830930802,1.98532277207564,2.78241402744506
|short_description=p1@Lix1
}}
}}

Latest revision as of 00:00, 26 September 2015

Short description:p1@Lix1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lix1_5end
Coexpression cluster:MCL_coexpression_mm9:624
Association with transcript: 0bp_to_ENSMUST00000172213, NM_025681, uc008apg.1_5end
EntrezGene:Lix1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lix1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F910.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F57.69
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.50
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D550.24
cortex, neonate N30.CNhs11107.1392-42F253.96
diencephalon, adult.CNhs10482.20-12F230.34
diencephalon, neonate N30.CNhs11201.1388-42B227.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E240.10
forelimb, embryo E12.CNhs10600.359-14H221.18
forelimb, embryo E13.CNhs10589.384-1E28.97
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E857.62
hippocampus, neonate N00.CNhs11228.627-43G138.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C215.09
medulla oblongata, neonate N30.CNhs11200.1396-42A314.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I9132.71
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E38.38
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A159.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A275.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D755.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.99
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I821.80
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.75e-1223
neuroblast (sensu Vertebrata)8.75e-1223
neural cell9.49e-1143
ectodermal cell3.37e-1044
neurectodermal cell3.37e-1044
neuron3.35e-0933
neuronal stem cell3.35e-0933
neuroblast3.35e-0933
electrically signaling cell3.35e-0933

Uber anatomy
Ontology termp-valuen
nervous system1.64e-2975
regional part of nervous system7.48e-2954
central nervous system1.09e-2873
neurectoderm1.12e-2864
neural plate1.12e-2864
presumptive neural plate1.12e-2864
neural tube2.05e-2752
neural rod2.05e-2752
future spinal cord2.05e-2752
neural keel2.05e-2752
ectoderm-derived structure2.05e-2595
ectoderm2.05e-2595
presumptive ectoderm2.05e-2595
brain1.53e-2447
future brain1.53e-2447
pre-chordal neural plate4.35e-2449
regional part of brain1.22e-2346
ecto-epithelium1.87e-2273
anterior neural tube4.37e-2240
gray matter1.49e-2134
regional part of forebrain2.66e-2139
forebrain2.66e-2139
future forebrain2.66e-2139
brain grey matter1.11e-1829
regional part of telencephalon1.11e-1829
telencephalon1.11e-1829
structure with developmental contribution from neural crest1.76e-1792
cerebral cortex1.64e-1521
cerebral hemisphere1.64e-1521
pallium1.64e-1521
regional part of cerebral cortex1.47e-1217
occipital lobe2.72e-0910
visual cortex2.72e-0910
neocortex2.72e-0910
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