FFCP PHASE1:Mm9::chr2:156904948..156905012,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:156904948..156905012,-
|short_description=p2@9830001H06Rik
|description=CAGE_peak_2_at_9830001H06Rik_5end
|association_with_transcript=0bp_to_ENSMUST000000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=320706 | |EntrezGene=320706 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2ACV6 | |UniProt=A2ACV6 | ||
|association_with_transcript=0bp_to_ENSMUST00000069098,NM_001164663,uc008nol.2_5end | |||
|cluster_id=chr2:156904948..156905012,- | |||
|description=CAGE_peak_2_at_9830001H06Rik_5end | |||
|id=chr2:156904948..156905012,- | |||
|ontology_enrichment_celltype=CL:0000221!2.19e-12!44;CL:0000133!2.19e-12!44;CL:0002319!6.18e-12!43;CL:0000540!1.07e-10!33;CL:0000047!1.07e-10!33;CL:0000031!1.07e-10!33;CL:0000404!1.07e-10!33;CL:0000117!3.49e-09!23;CL:0000337!3.49e-09!23;CL:0000055!4.22e-09!50;CL:0000393!3.34e-08!39;CL:0000211!3.34e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.03e-12,44;CL:0000133,2.03e-12,44;CL:0002319,5.77e-12,43;CL:0000540,1.00e-10,33;CL:0000047,1.00e-10,33;CL:0000031,1.00e-10,33;CL:0000404,1.00e-10,33;CL:0000117,3.31e-09,23;CL:0000337,3.31e-09,23;CL:0000393,3.19e-08,39;CL:0000211,3.19e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.32e-18!102;UBERON:0000924!8.32e-18!102;UBERON:0006601!8.32e-18!102;UBERON:0000073!5.21e-15!75;UBERON:0001016!5.21e-15!75;UBERON:0001017!5.42e-15!73;UBERON:0005743!5.42e-15!73;UBERON:0002346!1.87e-14!71;UBERON:0003075!1.87e-14!71;UBERON:0007284!1.87e-14!71;UBERON:0000033!1.67e-10!63;UBERON:0001049!5.52e-10!52;UBERON:0005068!5.52e-10!52;UBERON:0006241!5.52e-10!52;UBERON:0007135!5.52e-10!52;UBERON:0000468!1.24e-08!333;UBERON:0003056!3.00e-08!49;UBERON:0000955!3.37e-08!50;UBERON:0006238!3.37e-08!50;UBERON:0002616!8.41e-08!49;UBERON:0000025!9.35e-08!114;UBERON:0002048!1.06e-07!14;UBERON:0000117!1.06e-07!14;UBERON:0000171!1.06e-07!14;UBERON:0000170!1.06e-07!14;UBERON:0005597!1.06e-07!14;UBERON:0000118!1.06e-07!14;UBERON:0004111!2.59e-07!122;UBERON:0000922!9.02e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.61e-16,92;UBERON:0004121,1.87e-15,95;UBERON:0000924,1.87e-15,95;UBERON:0006601,1.87e-15,95;UBERON:0001016,4.76e-15,75;UBERON:0001017,4.95e-15,73;UBERON:0002346,3.08e-12,64;UBERON:0003075,3.08e-12,64;UBERON:0007284,3.08e-12,64;UBERON:0010371,1.37e-11,73;UBERON:0001049,5.21e-10,52;UBERON:0005068,5.21e-10,52;UBERON:0006241,5.21e-10,52;UBERON:0007135,5.21e-10,52;UBERON:0000073,1.56e-09,54;UBERON:0000955,2.80e-08,47;UBERON:0006238,2.80e-08,47;UBERON:0003056,2.86e-08,49;UBERON:0002616,7.12e-08,46;UBERON:0000025,1.01e-07,114;UBERON:0002048,1.02e-07,14;UBERON:0000117,1.02e-07,14;UBERON:0000171,1.02e-07,14;UBERON:0000170,1.02e-07,14;UBERON:0005597,1.02e-07,14;UBERON:0000118,1.02e-07,14;UBERON:0000922,2.63e-07,320;UBERON:0004111,2.80e-07,122 | |||
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| ||
|short_description=p2@9830001H06Rik | |||
}} | }} |
Latest revision as of 00:21, 26 September 2015
Short description: | p2@9830001H06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_9830001H06Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000069098, NM_001164663, uc008nol.2_5end |
EntrezGene: | 9830001H06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.03e-12 | 44 |
neurectodermal cell | 2.03e-12 | 44 |
neural cell | 5.77e-12 | 43 |
neuron | 1.00e-10 | 33 |
neuronal stem cell | 1.00e-10 | 33 |
neuroblast | 1.00e-10 | 33 |
electrically signaling cell | 1.00e-10 | 33 |
CNS neuron (sensu Vertebrata) | 3.31e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.31e-09 | 23 |
electrically responsive cell | 3.19e-08 | 39 |
electrically active cell | 3.19e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.61e-16 | 92 |
ectoderm-derived structure | 1.87e-15 | 95 |
ectoderm | 1.87e-15 | 95 |
presumptive ectoderm | 1.87e-15 | 95 |
nervous system | 4.76e-15 | 75 |
central nervous system | 4.95e-15 | 73 |
neurectoderm | 3.08e-12 | 64 |
neural plate | 3.08e-12 | 64 |
presumptive neural plate | 3.08e-12 | 64 |
ecto-epithelium | 1.37e-11 | 73 |
neural tube | 5.21e-10 | 52 |
neural rod | 5.21e-10 | 52 |
future spinal cord | 5.21e-10 | 52 |
neural keel | 5.21e-10 | 52 |
regional part of nervous system | 1.56e-09 | 54 |
brain | 2.80e-08 | 47 |
future brain | 2.80e-08 | 47 |
pre-chordal neural plate | 2.86e-08 | 49 |
regional part of brain | 7.12e-08 | 46 |
tube | 1.01e-07 | 114 |
lung | 1.02e-07 | 14 |
respiratory tube | 1.02e-07 | 14 |
respiration organ | 1.02e-07 | 14 |
pair of lungs | 1.02e-07 | 14 |
lung primordium | 1.02e-07 | 14 |
lung bud | 1.02e-07 | 14 |
embryo | 2.63e-07 | 320 |
anatomical conduit | 2.80e-07 | 122 |