FFCP PHASE1:Mm9::chr7:137836046..137836089,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57752 | |EntrezGene=57752 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9QL08,Q9JJG0 | |UniProt=E9QL08,Q9JJG0 | ||
|association_with_transcript=0bp_to_ENSMUST00000033141,NM_021314,uc009kak.1,uc009kal.1,uc009kam.1_5end | |association_with_transcript=0bp_to_ENSMUST00000033141,NM_021314,uc009kak.1,uc009kal.1,uc009kam.1_5end | ||
|cluster_id=chr7:137836046..137836089,+ | |||
|description=CAGE_peak_5_at_Tacc2_5end | |description=CAGE_peak_5_at_Tacc2_5end | ||
|id=chr7:137836046..137836089,+ | |id=chr7:137836046..137836089,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.66e-11!33;CL:0000047!2.66e-11!33;CL:0000031!2.66e-11!33;CL:0000404!2.66e-11!33;CL:0000393!5.39e-09!39;CL:0000211!5.39e-09!39;CL:0002319!7.30e-09!43;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44;CL:0000117!6.07e-08!23;CL:0000337!6.07e-08!23;CL:0000055!8.39e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.66e-11!33;CL:0000047!2.66e-11!33;CL:0000031!2.66e-11!33;CL:0000404!2.66e-11!33;CL:0000393!5.39e-09!39;CL:0000211!5.39e-09!39;CL:0002319!7.30e-09!43;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44;CL:0000117!6.07e-08!23;CL:0000337!6.07e-08!23;CL:0000055!8.39e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.75e-12,33;CL:0000047,3.75e-12,33;CL:0000031,3.75e-12,33;CL:0000404,3.75e-12,33;CL:0000393,1.01e-08,39;CL:0000211,1.01e-08,39;CL:0000117,2.26e-08,23;CL:0000337,2.26e-08,23;CL:0002319,2.99e-08,43;CL:0000221,8.88e-08,44;CL:0000133,8.88e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.13e-21!73;UBERON:0005743!6.13e-21!73;UBERON:0000073!1.11e-19!75;UBERON:0001016!1.11e-19!75;UBERON:0002346!1.44e-16!71;UBERON:0003075!1.44e-16!71;UBERON:0007284!1.44e-16!71;UBERON:0004121!1.57e-16!102;UBERON:0000924!1.57e-16!102;UBERON:0006601!1.57e-16!102;UBERON:0001049!4.08e-16!52;UBERON:0005068!4.08e-16!52;UBERON:0006241!4.08e-16!52;UBERON:0007135!4.08e-16!52;UBERON:0003056!8.00e-16!49;UBERON:0000153!6.43e-15!94;UBERON:0000033!1.30e-14!63;UBERON:0003080!3.92e-14!40;UBERON:0000955!4.11e-14!50;UBERON:0006238!4.11e-14!50;UBERON:0002780!5.14e-14!39;UBERON:0001890!5.14e-14!39;UBERON:0006240!5.14e-14!39;UBERON:0002616!1.71e-13!49;UBERON:0007811!3.73e-13!86;UBERON:0002020!5.14e-13!34;UBERON:0002791!1.49e-11!29;UBERON:0003528!1.49e-11!29;UBERON:0001893!1.49e-11!29;UBERON:0000956!1.09e-09!21;UBERON:0001869!1.09e-09!21;UBERON:0000203!1.09e-09!21;UBERON:0000468!3.31e-08!333;UBERON:0002619!3.46e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!6.13e-21!73;UBERON:0005743!6.13e-21!73;UBERON:0000073!1.11e-19!75;UBERON:0001016!1.11e-19!75;UBERON:0002346!1.44e-16!71;UBERON:0003075!1.44e-16!71;UBERON:0007284!1.44e-16!71;UBERON:0004121!1.57e-16!102;UBERON:0000924!1.57e-16!102;UBERON:0006601!1.57e-16!102;UBERON:0001049!4.08e-16!52;UBERON:0005068!4.08e-16!52;UBERON:0006241!4.08e-16!52;UBERON:0007135!4.08e-16!52;UBERON:0003056!8.00e-16!49;UBERON:0000153!6.43e-15!94;UBERON:0000033!1.30e-14!63;UBERON:0003080!3.92e-14!40;UBERON:0000955!4.11e-14!50;UBERON:0006238!4.11e-14!50;UBERON:0002780!5.14e-14!39;UBERON:0001890!5.14e-14!39;UBERON:0006240!5.14e-14!39;UBERON:0002616!1.71e-13!49;UBERON:0007811!3.73e-13!86;UBERON:0002020!5.14e-13!34;UBERON:0002791!1.49e-11!29;UBERON:0003528!1.49e-11!29;UBERON:0001893!1.49e-11!29;UBERON:0000956!1.09e-09!21;UBERON:0001869!1.09e-09!21;UBERON:0000203!1.09e-09!21;UBERON:0000468!3.31e-08!333;UBERON:0002619!3.46e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.57e-20,73;UBERON:0001016,4.94e-19,75;UBERON:0002346,3.09e-18,64;UBERON:0003075,3.09e-18,64;UBERON:0007284,3.09e-18,64;UBERON:0003056,4.99e-16,49;UBERON:0001049,9.19e-16,52;UBERON:0005068,9.19e-16,52;UBERON:0006241,9.19e-16,52;UBERON:0007135,9.19e-16,52;UBERON:0004121,2.06e-15,95;UBERON:0000924,2.06e-15,95;UBERON:0006601,2.06e-15,95;UBERON:0000073,1.23e-14,54;UBERON:0000955,1.29e-14,47;UBERON:0006238,1.29e-14,47;UBERON:0003080,3.34e-14,40;UBERON:0002780,4.64e-14,39;UBERON:0001890,4.64e-14,39;UBERON:0006240,4.64e-14,39;UBERON:0002616,6.30e-14,46;UBERON:0010371,1.05e-13,73;UBERON:0002020,3.94e-13,34;UBERON:0003528,1.78e-11,29;UBERON:0002791,1.78e-11,29;UBERON:0001893,1.78e-11,29;UBERON:0010314,3.03e-11,92;UBERON:0000956,1.12e-09,21;UBERON:0001869,1.12e-09,21;UBERON:0000203,1.12e-09,21;UBERON:0002619,6.10e-07,17 | |||
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| ||
|short_description=p5@Tacc2 | |short_description=p5@Tacc2 | ||
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Latest revision as of 00:25, 26 September 2015
Short description: | p5@Tacc2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000033141, NM_021314, uc009kak.1, uc009kal.1, uc009kam.1_5end |
EntrezGene: | Tacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.75e-12 | 33 |
neuronal stem cell | 3.75e-12 | 33 |
neuroblast | 3.75e-12 | 33 |
electrically signaling cell | 3.75e-12 | 33 |
electrically responsive cell | 1.01e-08 | 39 |
electrically active cell | 1.01e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.26e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.26e-08 | 23 |
neural cell | 2.99e-08 | 43 |
ectodermal cell | 8.88e-08 | 44 |
neurectodermal cell | 8.88e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.57e-20 | 73 |
nervous system | 4.94e-19 | 75 |
neurectoderm | 3.09e-18 | 64 |
neural plate | 3.09e-18 | 64 |
presumptive neural plate | 3.09e-18 | 64 |
pre-chordal neural plate | 4.99e-16 | 49 |
neural tube | 9.19e-16 | 52 |
neural rod | 9.19e-16 | 52 |
future spinal cord | 9.19e-16 | 52 |
neural keel | 9.19e-16 | 52 |
ectoderm-derived structure | 2.06e-15 | 95 |
ectoderm | 2.06e-15 | 95 |
presumptive ectoderm | 2.06e-15 | 95 |
regional part of nervous system | 1.23e-14 | 54 |
brain | 1.29e-14 | 47 |
future brain | 1.29e-14 | 47 |
anterior neural tube | 3.34e-14 | 40 |
regional part of forebrain | 4.64e-14 | 39 |
forebrain | 4.64e-14 | 39 |
future forebrain | 4.64e-14 | 39 |
regional part of brain | 6.30e-14 | 46 |
ecto-epithelium | 1.05e-13 | 73 |
gray matter | 3.94e-13 | 34 |
brain grey matter | 1.78e-11 | 29 |
regional part of telencephalon | 1.78e-11 | 29 |
telencephalon | 1.78e-11 | 29 |
structure with developmental contribution from neural crest | 3.03e-11 | 92 |
cerebral cortex | 1.12e-09 | 21 |
cerebral hemisphere | 1.12e-09 | 21 |
pallium | 1.12e-09 | 21 |
regional part of cerebral cortex | 6.10e-07 | 17 |