Personal tools

FFCP PHASE1:Mm9::chr10:49503296..49503388,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14806
|EntrezGene=14806
|HGNC=
|HGNC=
|MCL_coexpression_id=281
|TSSclassifier=NA
|UniProt=P39087
|UniProt=P39087
|association_with_transcript=-81bp_to_ENSMUST00000105485_5end
|association_with_transcript=-81bp_to_ENSMUST00000105485_5end
|cluster_id=chr10:49503296..49503388,-
|description=CAGE_peak_3_at_Grik2_5end
|description=CAGE_peak_3_at_Grik2_5end
|id=chr10:49503296..49503388,-
|id=chr10:49503296..49503388,-
|ontology_enrichment_celltype=CL:0000540!3.62e-12!33;CL:0000047!3.62e-12!33;CL:0000031!3.62e-12!33;CL:0000404!3.62e-12!33;CL:0000393!2.99e-09!39;CL:0000211!2.99e-09!39;CL:0000221!4.83e-08!44;CL:0000133!4.83e-08!44;CL:0002319!1.09e-07!43;CL:0000107!1.62e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,6.60e-14,33;CL:0000047,6.60e-14,33;CL:0000031,6.60e-14,33;CL:0000404,6.60e-14,33;CL:0000221,2.11e-10,44;CL:0000133,2.11e-10,44;CL:0000393,3.54e-10,39;CL:0000211,3.54e-10,39;CL:0002319,6.27e-10,43;CL:0000107,1.56e-09,9;CL:0000117,7.62e-07,23;CL:0000337,7.62e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.16e-22!75;UBERON:0001016!6.16e-22!75;UBERON:0004121!1.27e-21!102;UBERON:0000924!1.27e-21!102;UBERON:0006601!1.27e-21!102;UBERON:0001017!3.24e-21!73;UBERON:0005743!3.24e-21!73;UBERON:0002346!9.64e-20!71;UBERON:0003075!9.64e-20!71;UBERON:0007284!9.64e-20!71;UBERON:0000033!2.21e-18!63;UBERON:0003056!2.87e-15!49;UBERON:0000955!3.31e-15!50;UBERON:0006238!3.31e-15!50;UBERON:0001049!1.03e-14!52;UBERON:0005068!1.03e-14!52;UBERON:0006241!1.03e-14!52;UBERON:0007135!1.03e-14!52;UBERON:0002616!1.37e-14!49;UBERON:0003080!8.46e-12!40;UBERON:0002780!3.60e-11!39;UBERON:0001890!3.60e-11!39;UBERON:0006240!3.60e-11!39;UBERON:0002020!6.03e-10!34;UBERON:0002791!8.06e-09!29;UBERON:0003528!8.06e-09!29;UBERON:0001893!8.06e-09!29;UBERON:0000468!1.87e-08!333;UBERON:0000010!6.61e-08!11;UBERON:0002410!1.62e-07!9;UBERON:0000025!5.01e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.28e-27,75;UBERON:0004121,9.34e-27,95;UBERON:0000924,9.34e-27,95;UBERON:0006601,9.34e-27,95;UBERON:0001017,2.05e-26,73;UBERON:0002346,2.34e-23,64;UBERON:0003075,2.34e-23,64;UBERON:0007284,2.34e-23,64;UBERON:0010371,7.59e-20,73;UBERON:0000073,7.51e-18,54;UBERON:0003056,1.25e-17,49;UBERON:0010314,4.42e-17,92;UBERON:0001049,2.13e-16,52;UBERON:0005068,2.13e-16,52;UBERON:0006241,2.13e-16,52;UBERON:0007135,2.13e-16,52;UBERON:0000955,5.39e-16,47;UBERON:0006238,5.39e-16,47;UBERON:0002616,3.19e-15,46;UBERON:0003080,1.78e-13,40;UBERON:0002780,1.14e-12,39;UBERON:0001890,1.14e-12,39;UBERON:0006240,1.14e-12,39;UBERON:0002020,2.27e-11,34;UBERON:0003528,4.95e-11,29;UBERON:0002791,4.95e-11,29;UBERON:0001893,4.95e-11,29;UBERON:0000010,4.71e-10,11;UBERON:0002410,1.56e-09,9;UBERON:0002021,2.93e-08,10;UBERON:0000411,2.93e-08,10;UBERON:0001950,2.93e-08,10;UBERON:0002619,7.07e-07,17
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,2.02316460859598,1.5869729378161,3.80298842103708,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,1.26194976810829,0.856952953211411,0.662605622854841,1.10241719293459,1.24599112323707,0,4.40463523997555,4.72443150915195,5.52983519722476,2.37395317914349,2.47016637726506,2.08365348222704,2.79182999001381,9.00420176050688,3.66715794664344,4.12480019663135,2.27794689278565,2.60959224155421,1.13589289999776,4.08086424576642,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0.258937883647172,1.03909497345377,0.867426633830679,0.304465478312141,0.230615497256059,1.95939432718409,1.76383060703557,0,0,0.433798070759735,0,0.647067399789637,0.220841518460394,0.969750506270444,0,8.78342391034641,12.3573557019938,0.255457055208591,0,0,0,9.73639156131348,7.32000964509802,2.76439574648302,4.86708096538374,4.09144731728529,4.36354893575076,3.56930778749067,1.83310854930569,0.373220911830279,0.252722758433675,0.420883711772948,3.6433724029557,1.60931473103431,3.42118046630164,4.82255417074288,5.44291993210623,5.89323113310309,4.59138450342671,1.55222022443409,0,1.13463648100692,0.527853372491847,0.43839146485515,0,0.348252166522167,0.205782136407943,2.58744546864041,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,1.42046841351126,1.18058539048442,0.617068451549513,1.16266972375204,0.536546802799238,0.700592054203017,0.658239399653922,0.492502392237286,0.729619285912702,0.877199924551994,0.219550115291051,1.20785776884335,3.57492912559016,2.26390147234426,0,0.264450566663544,3.41261200856374,3.25131340604614,1.28867461322093,1.81515172161008,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0.898819408654221,0,0.199141273254367,0.379335801906163,1.5994791765362,2.25415471346161,0.610953983535943,0.387904974335251,0.561086559122548,0.316182685621286,0,0.156998727841375,0.246794327843601,0,0.500535317148282,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,1.29327233116623,1.13694847062291,0.651859905768103,0.509235257325564,1.17345124144251,0.837531287209079,0.238043640886014,0.975668239288994,1.26108115284953,1.32878813789265,1.75400245523236,0.983179888294428,2.41758974612254,1.88043776155965,0,0,0,0,4.33486592967038,5.04010252346474,8.85248705034047,0.252470927204373,11.042787679569,7.02789739733949,8.83235930704476,10.0366895140072,10.6943363559549,11.6061377623421,5.26253912177363,7.3063964477828,8.30104333687699,6.74774764485795,0,0.712262414669021,1.62886959353576,2.14461159864296,0,0.971122544619926,0.604647113929502,0.943025398779491,0.295301892880773,0.307435147943927,1.03371317267288,0,1.06949213515416,0,0,0,8.85142974959849,1.8006109403131,0.776152102696527,1.50035924522115,1.77340233642274,0.891844088010353,1.97458824722545,0.304464949114599,0.938686832254841,0,0.220528398054962,0.32977250588296,0.484393280087717,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,4.63563255026274,0,0.82554747185289,1.11116716421827,0,0.27338845544205,0,0,0,0,0,2.53068794864908,2.64315307264903,1.62008011232702,1.67270636811575,1.74690050996942,1.61837215661785,0.743881101528023,0.785267825952089,0,0,0,0.747582730219894,1.15820943319968,0.583353565032143,1.16243841129958,0.675824501963113,1.17357238645754,0.781226309063701,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,1.28206136987086,0.214368379079066,0,4.51801474093653,5.9842280745933,4.01026859407578,3.78077001156113,4.11049511862385,3.0215755895588,6.07520250208625,5.40385443869065,3.62513927187364,3.62432218226274,0.62272408550506,4.78829848081237,1.70733605754134,0.486213434136588,0.209613162627982,0.183843508450014,1.55572709461131,1.03017528619447,1.28367683836726,0.505394423527595,2.02783439912192,0.565879024158229,1.03005658216871,0.960377286073039,0.918967503289812,1.42888107384922,1.73826488917283,0.964546102318525,1.64834360321323,0.735994600671987,0.685738504770831,1.24233064311536,1.66905332963125,1.0174249164263,1.41164070622996,0.930760686808441,0.365855945745545,1.8414879800649,1.49384525230448,1.12228454331548,0.830445126869219,0.591026894253381,0.409231043169689,1.23949472948773,1.35034627686799,0.999242311751784,0.935726433781634,1.28922632428979,1.14772999241306,0.441182838239031,0.695603506861264
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,2.02316460859598,1.5869729378161,3.80298842103708,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,1.26194976810829,0.856952953211411,0.662605622854841,1.10241719293459,1.24599112323707,0,4.40463523997555,4.72443150915195,5.52983519722476,2.37395317914349,2.47016637726506,2.08365348222704,2.79182999001381,9.00420176050688,3.66715794664344,4.12480019663135,2.27794689278565,2.60959224155421,1.13589289999776,4.08086424576642,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0.258937883647172,1.03909497345377,0.867426633830679,0.304465478312141,0.230615497256059,1.95939432718409,1.76383060703557,0,0,0.433798070759735,0,0.647067399789637,0.220841518460394,0.969750506270444,0,8.78342391034641,12.3573557019938,0.255457055208591,0,0,0,9.73639156131348,7.32000964509802,2.76439574648302,4.86708096538374,4.09144731728529,4.36354893575076,3.56930778749067,1.83310854930569,0.373220911830279,0.252722758433675,0.420883711772948,3.6433724029557,1.60931473103431,3.42118046630164,4.82255417074288,5.44291993210623,5.89323113310309,4.59138450342671,1.55222022443409,0,1.13463648100692,0.527853372491847,0.43839146485515,0,0.348252166522167,0.205782136407943,2.58744546864041,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,1.42046841351126,1.18058539048442,0.617068451549513,1.16266972375204,0.536546802799238,0.700592054203017,0.658239399653922,0.492502392237286,0.729619285912702,0.877199924551994,0.219550115291051,1.20785776884335,3.57492912559016,2.26390147234426,0,0.264450566663544,3.41261200856374,3.25131340604614,1.28867461322093,1.81515172161008,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0.898819408654221,0,0.199141273254367,0.379335801906163,1.5994791765362,2.25415471346161,0.610953983535943,0.387904974335251,0.561086559122548,0.316182685621286,0,0.156998727841375,0.246794327843601,0,0.500535317148282,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,1.29327233116623,1.13694847062291,0.651859905768103,0.509235257325564,1.17345124144251,0.837531287209079,0.238043640886014,0.975668239288994,1.26108115284953,1.32878813789265,1.75400245523236,0.983179888294428,2.41758974612254,1.88043776155965,0,0,0,0,4.33486592967038,5.04010252346474,8.85248705034047,0.252470927204373,11.042787679569,7.02789739733949,8.83235930704476,10.0366895140072,10.6943363559549,11.6061377623421,5.26253912177363,7.3063964477828,8.30104333687699,6.74774764485795,0,0.712262414669021,1.62886959353576,2.14461159864296,0,0.971122544619926,0.604647113929502,0.943025398779491,0.295301892880773,0.307435147943927,1.03371317267288,0,1.06949213515416,0,0,0,8.85142974959849,1.8006109403131,0.776152102696527,1.50035924522115,1.77340233642274,0.891844088010353,1.97458824722545,0.304464949114599,0.938686832254841,0,0.220528398054962,0.32977250588296,0.484393280087717,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,4.63563255026274,0,0.82554747185289,1.11116716421827,0,0.27338845544205,0,0,0,0,0,2.53068794864908,2.64315307264903,1.62008011232702,1.67270636811575,1.74690050996942,1.61837215661785,0.743881101528023,0.785267825952089,0,0,0,0.747582730219894,1.15820943319968,0.583353565032143,1.16243841129958,0.675824501963113,1.17357238645754,0.781226309063701,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,1.28206136987086,0.214368379079066,0,4.51801474093653,5.9842280745933,4.01026859407578,3.78077001156113,4.11049511862385,3.0215755895588,6.07520250208625,5.40385443869065,3.62513927187364,3.62432218226274,0.62272408550506,4.78829848081237,1.70733605754134,0.486213434136588,0.209613162627982,0.183843508450014,1.55572709461131,1.03017528619447,1.28367683836726,0.505394423527595,2.02783439912192,0.565879024158229,1.03005658216871,0.960377286073039,0.918967503289812,1.42888107384922,1.73826488917283,0.964546102318525,1.64834360321323,0.735994600671987,0.685738504770831,1.24233064311536,1.66905332963125,1.0174249164263,1.41164070622996,0.930760686808441,0.365855945745545,1.8414879800649,1.49384525230448,1.12228454331548,0.830445126869219,0.591026894253381,0.409231043169689,1.23949472948773,1.35034627686799,0.999242311751784,0.935726433781634,1.28922632428979,1.14772999241306,0.441182838239031,0.695603506861264
|short_description=p3@Grik2
|short_description=p3@Grik2
}}
}}

Latest revision as of 01:30, 26 September 2015

Short description:p3@Grik2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Grik2_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: -81bp_to_ENSMUST00000105485_5end
EntrezGene:Grik2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Grik2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F94.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.74
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.28e-2775
ectoderm-derived structure9.34e-2795
ectoderm9.34e-2795
presumptive ectoderm9.34e-2795
central nervous system2.05e-2673
neurectoderm2.34e-2364
neural plate2.34e-2364
presumptive neural plate2.34e-2364
ecto-epithelium7.59e-2073
regional part of nervous system7.51e-1854
pre-chordal neural plate1.25e-1749
structure with developmental contribution from neural crest4.42e-1792
neural tube2.13e-1652
neural rod2.13e-1652
future spinal cord2.13e-1652
neural keel2.13e-1652
brain5.39e-1647
future brain5.39e-1647
regional part of brain3.19e-1546
anterior neural tube1.78e-1340
regional part of forebrain1.14e-1239
forebrain1.14e-1239
future forebrain1.14e-1239
gray matter2.27e-1134
brain grey matter4.95e-1129
regional part of telencephalon4.95e-1129
telencephalon4.95e-1129
peripheral nervous system4.71e-1011
autonomic nervous system1.56e-099
occipital lobe2.93e-0810
visual cortex2.93e-0810
neocortex2.93e-0810
regional part of cerebral cortex7.07e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:49503296..49503388,-&oldid=4225548"