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FFCP PHASE1:Mm9::chr4:101927344..101927366,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18578
|EntrezGene=18578
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q80VK8,Q8VBU5
|UniProt=Q80VK8,Q8VBU5
|association_with_transcript=0bp_to_ENSMUST00000106907,NM_001177983,uc008twj.2,uc012dhm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000106907,NM_001177983,uc008twj.2,uc012dhm.1_5end
|cluster_id=chr4:101927344..101927366,+
|description=CAGE_peak_8_at_Pde4b_5end
|description=CAGE_peak_8_at_Pde4b_5end
|id=chr4:101927344..101927366,+
|id=chr4:101927344..101927366,+
|ontology_enrichment_celltype=CL:0000540!3.43e-15!33;CL:0000047!3.43e-15!33;CL:0000031!3.43e-15!33;CL:0000404!3.43e-15!33;CL:0000117!8.91e-12!23;CL:0000337!8.91e-12!23;CL:0000221!3.05e-11!44;CL:0000133!3.05e-11!44;CL:0002319!1.32e-10!43;CL:0000393!1.59e-10!39;CL:0000211!1.59e-10!39;CL:0000055!3.89e-07!50
|ontology_enrichment_celltype=CL:0000540!3.43e-15!33;CL:0000047!3.43e-15!33;CL:0000031!3.43e-15!33;CL:0000404!3.43e-15!33;CL:0000117!8.91e-12!23;CL:0000337!8.91e-12!23;CL:0000221!3.05e-11!44;CL:0000133!3.05e-11!44;CL:0002319!1.32e-10!43;CL:0000393!1.59e-10!39;CL:0000211!1.59e-10!39;CL:0000055!3.89e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.40e-12,33;CL:0000047,5.40e-12,33;CL:0000031,5.40e-12,33;CL:0000404,5.40e-12,33;CL:0000117,3.27e-11,23;CL:0000337,3.27e-11,23;CL:0000393,2.46e-09,39;CL:0000211,2.46e-09,39;CL:0000221,7.19e-09,44;CL:0000133,7.19e-09,44;CL:0002319,5.40e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.86e-22!73;UBERON:0005743!7.86e-22!73;UBERON:0000073!1.67e-21!75;UBERON:0001016!1.67e-21!75;UBERON:0000033!2.84e-18!63;UBERON:0004121!2.53e-17!102;UBERON:0000924!2.53e-17!102;UBERON:0006601!2.53e-17!102;UBERON:0001049!6.10e-15!52;UBERON:0005068!6.10e-15!52;UBERON:0006241!6.10e-15!52;UBERON:0007135!6.10e-15!52;UBERON:0000955!1.24e-14!50;UBERON:0006238!1.24e-14!50;UBERON:0002616!6.39e-14!49;UBERON:0002346!7.26e-14!71;UBERON:0003075!7.26e-14!71;UBERON:0007284!7.26e-14!71;UBERON:0003056!2.14e-12!49;UBERON:0002020!2.23e-11!34;UBERON:0003080!6.91e-11!40;UBERON:0002780!3.01e-10!39;UBERON:0001890!3.01e-10!39;UBERON:0006240!3.01e-10!39;UBERON:0007811!4.61e-10!86;UBERON:0002791!2.88e-09!29;UBERON:0003528!2.88e-09!29;UBERON:0001893!2.88e-09!29;UBERON:0000153!3.12e-09!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.22e-22,73;UBERON:0001016,2.53e-21,75;UBERON:0004121,3.14e-20,95;UBERON:0000924,3.14e-20,95;UBERON:0006601,3.14e-20,95;UBERON:0000073,1.02e-18,54;UBERON:0001049,1.14e-16,52;UBERON:0005068,1.14e-16,52;UBERON:0006241,1.14e-16,52;UBERON:0007135,1.14e-16,52;UBERON:0002346,2.95e-15,64;UBERON:0003075,2.95e-15,64;UBERON:0007284,2.95e-15,64;UBERON:0000955,5.43e-15,47;UBERON:0006238,5.43e-15,47;UBERON:0010371,8.94e-15,73;UBERON:0002616,7.42e-14,46;UBERON:0002020,1.01e-11,34;UBERON:0002420,3.78e-11,8;UBERON:0007245,3.78e-11,8;UBERON:0010009,3.78e-11,8;UBERON:0010011,3.78e-11,8;UBERON:0000454,3.78e-11,8;UBERON:0003080,9.04e-11,40;UBERON:0003056,1.09e-10,49;UBERON:0003528,3.56e-10,29;UBERON:0002791,3.56e-10,29;UBERON:0001893,3.56e-10,29;UBERON:0010314,8.44e-10,92;UBERON:0002780,8.75e-10,39;UBERON:0001890,8.75e-10,39;UBERON:0006240,8.75e-10,39;UBERON:0000369,1.73e-07,5;UBERON:0002435,1.73e-07,5;UBERON:0000204,1.73e-07,5;UBERON:0010082,1.73e-07,5;UBERON:0003076,3.75e-07,12;UBERON:0003057,3.75e-07,12
|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,2.11596391708813,2.53532561402472,0,0,0,0,0,0.898800331555214,0.384218305321555,0.933206510776299,0.675029691658453,0.630974884054146,0.856952953211411,1.10434270475807,1.22490799214954,0.862609239164127,0.919218786610021,2.20231761998777,3.57524546638526,6.91229399653096,2.50583946687368,3.20206752608434,3.12548022334056,4.4669279840221,1.12552522006336,5.19514042441154,0.883885756421003,1.56608848879013,2.79599168737951,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,5.63373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,2.63502717310392,2.30391377494801,0.255457055208591,0.11981512450592,0,0,5.39246301857362,2.74500361691176,1.13088916901578,1.73824320192276,2.30143911597297,6.85700547046548,3.40706652442291,0.101839363850316,0.248813941220186,0,0.420883711772948,0.390361328888111,0,0.540186389416048,0.30140963567143,1.02054748726992,0.896796041993948,1.21812241927647,2.58703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.946978942340841,0.983821158737019,0.771335564436891,0.232533944750408,0.268273401399619,0.817357396570186,0.822799249567402,0,0.405344047729279,0,0,0,3.36463917702604,2.77842453424068,0,0.264450566663544,3.19932375802851,2.32236671860439,1.15980715189884,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,1.18821560042632,0.469380496577004,0.167506257441816,0.238043640886014,0,0.630540576424764,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0,9.15138362930414,7.03270119553219,0,0,0.94652465824877,0.390438744296638,0.646270193198397,2.38968797952552,3.7875774594007,3.11384183867716,0.404810701674894,0.292255857911312,0.790575555893047,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0.643011105094777,1.06404140185364,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,1.07891477107857,0.330613822901344,0,0.777689839750757,3.10669656543463,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.117357238645754,0,0,0,0,0,0.405450430580328,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0,1.03111909406213,2.05524755931193,1.5107877947794,0,1.80128481289688,0.906284817968409,0.51776031175182,0.518936737920883,2.79317411380722,1.36586884603307,2.18796045361465,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,0.64183841918363,1.26348605881899,1.01391719956096,1.13175804831646,0.749132059759059,0.832326981263301,0.918967503289812,2.38146845641537,0.927074607558844,0.192909220463705,0.824171801606613,1.32479028120958,1.37147700954166,0.887379030796687,0.715308569841963,1.0174249164263,1.03520318456864,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,0.561142271657738,0.711810108745045,0.492522411877817,2.45538625901814,0.929621047115796,0.578719832943424,0.999242311751784,0.701794825336225,0.644613162144895,0.382576664137687,0,0
|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,2.11596391708813,2.53532561402472,0,0,0,0,0,0.898800331555214,0.384218305321555,0.933206510776299,0.675029691658453,0.630974884054146,0.856952953211411,1.10434270475807,1.22490799214954,0.862609239164127,0.919218786610021,2.20231761998777,3.57524546638526,6.91229399653096,2.50583946687368,3.20206752608434,3.12548022334056,4.4669279840221,1.12552522006336,5.19514042441154,0.883885756421003,1.56608848879013,2.79599168737951,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,5.63373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,2.63502717310392,2.30391377494801,0.255457055208591,0.11981512450592,0,0,5.39246301857362,2.74500361691176,1.13088916901578,1.73824320192276,2.30143911597297,6.85700547046548,3.40706652442291,0.101839363850316,0.248813941220186,0,0.420883711772948,0.390361328888111,0,0.540186389416048,0.30140963567143,1.02054748726992,0.896796041993948,1.21812241927647,2.58703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.946978942340841,0.983821158737019,0.771335564436891,0.232533944750408,0.268273401399619,0.817357396570186,0.822799249567402,0,0.405344047729279,0,0,0,3.36463917702604,2.77842453424068,0,0.264450566663544,3.19932375802851,2.32236671860439,1.15980715189884,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,1.18821560042632,0.469380496577004,0.167506257441816,0.238043640886014,0,0.630540576424764,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0,9.15138362930414,7.03270119553219,0,0,0.94652465824877,0.390438744296638,0.646270193198397,2.38968797952552,3.7875774594007,3.11384183867716,0.404810701674894,0.292255857911312,0.790575555893047,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0.643011105094777,1.06404140185364,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,1.07891477107857,0.330613822901344,0,0.777689839750757,3.10669656543463,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.117357238645754,0,0,0,0,0,0.405450430580328,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0,1.03111909406213,2.05524755931193,1.5107877947794,0,1.80128481289688,0.906284817968409,0.51776031175182,0.518936737920883,2.79317411380722,1.36586884603307,2.18796045361465,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,0.64183841918363,1.26348605881899,1.01391719956096,1.13175804831646,0.749132059759059,0.832326981263301,0.918967503289812,2.38146845641537,0.927074607558844,0.192909220463705,0.824171801606613,1.32479028120958,1.37147700954166,0.887379030796687,0.715308569841963,1.0174249164263,1.03520318456864,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,0.561142271657738,0.711810108745045,0.492522411877817,2.45538625901814,0.929621047115796,0.578719832943424,0.999242311751784,0.701794825336225,0.644613162144895,0.382576664137687,0,0
|short_description=p8@Pde4b
|short_description=p8@Pde4b
}}
}}

Latest revision as of 01:41, 26 September 2015

Short description:p8@Pde4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Pde4b_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_ENSMUST00000106907, NM_001177983, uc008twj.2, uc012dhm.1_5end
EntrezGene:Pde4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Pde4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.40e-1233
neuronal stem cell5.40e-1233
neuroblast5.40e-1233
electrically signaling cell5.40e-1233
CNS neuron (sensu Vertebrata)3.27e-1123
neuroblast (sensu Vertebrata)3.27e-1123
electrically responsive cell2.46e-0939
electrically active cell2.46e-0939
ectodermal cell7.19e-0944
neurectodermal cell7.19e-0944
neural cell5.40e-0843

Uber anatomy
Ontology termp-valuen
central nervous system3.22e-2273
nervous system2.53e-2175
ectoderm-derived structure3.14e-2095
ectoderm3.14e-2095
presumptive ectoderm3.14e-2095
regional part of nervous system1.02e-1854
neural tube1.14e-1652
neural rod1.14e-1652
future spinal cord1.14e-1652
neural keel1.14e-1652
neurectoderm2.95e-1564
neural plate2.95e-1564
presumptive neural plate2.95e-1564
brain5.43e-1547
future brain5.43e-1547
ecto-epithelium8.94e-1573
regional part of brain7.42e-1446
gray matter1.01e-1134
basal ganglion3.78e-118
nuclear complex of neuraxis3.78e-118
aggregate regional part of brain3.78e-118
collection of basal ganglia3.78e-118
cerebral subcortex3.78e-118
anterior neural tube9.04e-1140
pre-chordal neural plate1.09e-1049
brain grey matter3.56e-1029
regional part of telencephalon3.56e-1029
telencephalon3.56e-1029
structure with developmental contribution from neural crest8.44e-1092
regional part of forebrain8.75e-1039
forebrain8.75e-1039
future forebrain8.75e-1039
corpus striatum1.73e-075
striatum1.73e-075
ventral part of telencephalon1.73e-075
future corpus striatum1.73e-075
posterior neural tube3.75e-0712
chordal neural plate3.75e-0712
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