FFCP PHASE1:Mm9::chr17:25922478..25922536,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:25922478..25922536,- to FFCP PHASE1:Mm9::chr17:25922478..25922536,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68977 | |EntrezGene=68977 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=347 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZU6,Q9DB32,D3YUS7 | |UniProt=D3YZU6,Q9DB32,D3YUS7 | ||
|association_with_transcript=0bp_to_ENSMUST00000133071,ENSMUST00000138759,ENSMUST00000140738,ENSMUST00000143248,ENSMUST00000145053,ENSMUST00000148986,uc008bbs.1,uc008bbt.1,uc008bbu.1_5end | |||
|cluster_id=chr17:25922478..25922536,- | |||
|description=CAGE_peak_1_at_Haghl_5end | |||
|id=chr17:25922478..25922536,- | |||
|ontology_enrichment_celltype=CL:0000221!2.09e-15!44;CL:0000133!2.09e-15!44;CL:0002319!5.86e-15!43;CL:0000055!1.37e-14!50;CL:0000393!7.38e-13!39;CL:0000211!7.38e-13!39;CL:0000540!1.40e-12!33;CL:0000047!1.40e-12!33;CL:0000031!1.40e-12!33;CL:0000404!1.40e-12!33;CL:0000117!2.20e-12!23;CL:0000337!2.20e-12!23;CL:0002321!3.77e-08!70;CL:0000220!3.77e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.09e-15,44;CL:0000133,2.09e-15,44;CL:0002319,5.86e-15,43;CL:0000393,7.38e-13,39;CL:0000211,7.38e-13,39;CL:0000540,1.40e-12,33;CL:0000047,1.40e-12,33;CL:0000031,1.40e-12,33;CL:0000404,1.40e-12,33;CL:0000117,2.20e-12,23;CL:0000337,2.20e-12,23;CL:0002321,3.77e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.27e-35!73;UBERON:0005743!5.27e-35!73;UBERON:0000073!6.36e-33!75;UBERON:0001016!6.36e-33!75;UBERON:0001049!2.17e-27!52;UBERON:0005068!2.17e-27!52;UBERON:0006241!2.17e-27!52;UBERON:0007135!2.17e-27!52;UBERON:0002346!2.83e-26!71;UBERON:0003075!2.83e-26!71;UBERON:0007284!2.83e-26!71;UBERON:0000955!4.36e-26!50;UBERON:0006238!4.36e-26!50;UBERON:0002616!1.24e-25!49;UBERON:0000033!2.36e-25!63;UBERON:0004121!5.17e-25!102;UBERON:0000924!5.17e-25!102;UBERON:0006601!5.17e-25!102;UBERON:0003056!1.86e-20!49;UBERON:0003080!8.11e-20!40;UBERON:0007811!1.43e-19!86;UBERON:0002780!3.93e-19!39;UBERON:0001890!3.93e-19!39;UBERON:0006240!3.93e-19!39;UBERON:0000153!7.42e-19!94;UBERON:0002020!3.32e-18!34;UBERON:0002791!3.59e-15!29;UBERON:0003528!3.59e-15!29;UBERON:0001893!3.59e-15!29;UBERON:0000956!8.61e-11!21;UBERON:0001869!8.61e-11!21;UBERON:0000203!8.61e-11!21;UBERON:0002619!1.14e-09!17;UBERON:0003076!4.65e-08!12;UBERON:0003057!4.65e-08!12;UBERON:0002021!4.47e-07!10;UBERON:0000411!4.47e-07!10;UBERON:0001950!4.47e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.27e-35,73;UBERON:0001016,6.36e-33,75;UBERON:0000073,5.55e-29,54;UBERON:0002346,1.53e-27,64;UBERON:0003075,1.53e-27,64;UBERON:0007284,1.53e-27,64;UBERON:0001049,2.17e-27,52;UBERON:0005068,2.17e-27,52;UBERON:0006241,2.17e-27,52;UBERON:0007135,2.17e-27,52;UBERON:0004121,1.88e-25,95;UBERON:0000924,1.88e-25,95;UBERON:0006601,1.88e-25,95;UBERON:0000955,6.93e-24,47;UBERON:0006238,6.93e-24,47;UBERON:0002616,1.94e-23,46;UBERON:0010371,4.61e-22,73;UBERON:0010314,5.22e-21,92;UBERON:0003056,1.86e-20,49;UBERON:0003080,8.11e-20,40;UBERON:0002780,3.93e-19,39;UBERON:0001890,3.93e-19,39;UBERON:0006240,3.93e-19,39;UBERON:0002020,3.32e-18,34;UBERON:0003528,3.59e-15,29;UBERON:0002791,3.59e-15,29;UBERON:0001893,3.59e-15,29;UBERON:0000956,8.61e-11,21;UBERON:0001869,8.61e-11,21;UBERON:0000203,8.61e-11,21;UBERON:0002619,1.14e-09,17;UBERON:0003076,4.65e-08,12;UBERON:0003057,4.65e-08,12;UBERON:0002021,4.47e-07,10;UBERON:0000411,4.47e-07,10;UBERON:0001950,4.47e-07,10 | |||
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| ||
|short_description=p1@Haghl | |||
}} | }} |
Latest revision as of 02:29, 26 September 2015
Short description: | p1@Haghl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Haghl_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 0bp_to_ENSMUST00000133071, ENSMUST00000138759, ENSMUST00000140738, ENSMUST00000143248, ENSMUST00000145053, ENSMUST00000148986, uc008bbs.1, uc008bbt.1, uc008bbu.1_5end |
EntrezGene: | Haghl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.09e-15 | 44 |
neurectodermal cell | 2.09e-15 | 44 |
neural cell | 5.86e-15 | 43 |
electrically responsive cell | 7.38e-13 | 39 |
electrically active cell | 7.38e-13 | 39 |
neuron | 1.40e-12 | 33 |
neuronal stem cell | 1.40e-12 | 33 |
neuroblast | 1.40e-12 | 33 |
electrically signaling cell | 1.40e-12 | 33 |
CNS neuron (sensu Vertebrata) | 2.20e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.20e-12 | 23 |
embryonic cell | 3.77e-08 | 70 |