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FFCP PHASE1:Mm9::chr9:106105521..106105532,+: Difference between revisions

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{{FFCP|EntrezGene=23999|HGNC=|MCL_coexpression_id=3|UniProt=Q9Z0P5|association_with_transcript=82bp_to_ENSMUST00000024047,NM_011876,uc009rjf.1_5end|description=CAGE_peak_3_at_Twf2_5end|id=chr9:106105521..106105532,+|ontology_enrichment_celltype=CL:0000988!6.78e-08!32;CL:0002032!6.78e-08!32;CL:0000037!6.78e-08!32;CL:0000566!6.78e-08!32;CL:0000837!6.78e-08!32;CL:0000219!1.60e-07!54;CL:0002320!2.57e-07!46;CL:0000134!2.57e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-21,32;CL:0002032,1.07e-21,32;CL:0000037,1.07e-21,32;CL:0000837,1.07e-21,32;CL:0002320,9.64e-21,46;CL:0000134,9.64e-21,46;CL:0000219,3.13e-18,54;CL:0000738,1.44e-14,17;CL:0002087,1.44e-14,17;CL:0002031,3.57e-14,25;CL:0000034,3.98e-13,97;CL:0000723,2.34e-12,91;CL:0000048,2.34e-12,91;CL:0000838,5.08e-12,12;CL:0000049,8.14e-12,19;CL:0000542,6.00e-11,13;CL:0000051,6.00e-11,13;CL:0000084,1.68e-10,11;CL:0000827,1.68e-10,11;CL:0000557,8.41e-10,7;CL:0000763,4.32e-08,16;CL:0000791,8.27e-08,9;CL:0000789,8.27e-08,9;CL:0002420,8.27e-08,9;CL:0002419,8.27e-08,9;CL:0000790,8.27e-08,9;CL:0002092,4.08e-07,3;CL:0002540,4.08e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.61e-07,3;DOID:4045,1.61e-07,3|ontology_enrichment_uberon=UBERON:0002193!5.61e-09!48;UBERON:0002390!2.43e-08!45;UBERON:0003061!2.43e-08!45;UBERON:0002384!2.57e-07!46;UBERON:0002204!3.11e-07!32;UBERON:0001474!3.22e-07!22;UBERON:0004765!3.22e-07!22;UBERON:0001434!3.22e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.64e-21,46;UBERON:0002371,2.71e-15,16;UBERON:0001474,3.37e-14,22;UBERON:0004765,3.37e-14,22;UBERON:0001434,3.37e-14,22;UBERON:0002204,5.06e-14,32;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,2.25e-09,45;UBERON:0003061,2.25e-09,45|phase1_expression=2.08193501236232,0,0,0,0,0,0,4.51931632045517,0.84473233291,1.63845168425395,0,0.159544317990673,3.0816131387617,2.09808965805594,0.333109761815663,0.404950534779652,0,1.57731082679119,1.09691546884591,1.69755860719212,0.425216450755349,1.48936426801328,1.56719873483361,0.319984845586813,0.45881856213434,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,26.7860243671621,21.8773896466664,20.9409497589519,27.6468799374577,21.8574555186703,30.5871522409627,0.377690453926732,0.202753862439029,0,0,0.436050312760893,0.219686182734472,0.777719596297134,0.279972843250725,1.43752564364972,1.8456086666351,5.07753499407941,4.03312558970957,0,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,4.04954872776629,5.93319817540185,2.8419204597844,1.79760066311043,2.68952813725088,0,0.135005938331691,0.210324961351382,0.285650984403804,0.883474163806454,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0,0.279182999001381,1.12552522006336,0.61119299110724,0,0.569486723196412,0.372798891650601,0.37863096666592,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0.681721290312231,0.519572009205738,3.18005617059306,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,1.29468941823586,0.445326417194474,1.56136794089522,0.913396434936424,0.691846491768175,1.20578112442098,0.705532242814229,0.628332956648377,0,0.144599356919912,0.884610551949874,0.485300549842228,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0.255457055208591,2.03685711660064,1.19980546198682,1.77898317902291,0.149790639404823,0,0,0.173824320192276,1.27857728665165,0.41557608911912,0.324482526135515,0.305518091550949,0.746441823660558,0,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0.199034266818493,1.40442637462647,3.08817488537658,2.27330799516474,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.324275238183423,0.292399974850665,0,0.671032093801859,0.630869845692382,0.308713837137853,0,0.264450566663544,0.426576501070468,0.232236671860439,0,0.403367049246685,0,0.760902504450237,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.610953983535943,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0,0,0,0.72353147925725,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,0,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.554259570499814,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,1.57635144106191,0.44292937929755,0.956728611944923,0.81931657357869,1.72684981865896,0.723245292907558,0,3.26343410291226,0,0,0.481651769963376,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=23999
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q9Z0P5
|association_with_transcript=82bp_to_ENSMUST00000024047,NM_011876,uc009rjf.1_5end
|cluster_id=chr9:106105521..106105532,+
|description=CAGE_peak_3_at_Twf2_5end
|id=chr9:106105521..106105532,+
|ontology_enrichment_celltype=CL:0000988!6.78e-08!32;CL:0002032!6.78e-08!32;CL:0000037!6.78e-08!32;CL:0000566!6.78e-08!32;CL:0000837!6.78e-08!32;CL:0000219!1.60e-07!54;CL:0002320!2.57e-07!46;CL:0000134!2.57e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-21,32;CL:0002032,1.07e-21,32;CL:0000037,1.07e-21,32;CL:0000837,1.07e-21,32;CL:0002320,9.64e-21,46;CL:0000134,9.64e-21,46;CL:0000219,3.13e-18,54;CL:0000738,1.44e-14,17;CL:0002087,1.44e-14,17;CL:0002031,3.57e-14,25;CL:0000034,3.98e-13,97;CL:0000723,2.34e-12,91;CL:0000048,2.34e-12,91;CL:0000838,5.08e-12,12;CL:0000049,8.14e-12,19;CL:0000542,6.00e-11,13;CL:0000051,6.00e-11,13;CL:0000084,1.68e-10,11;CL:0000827,1.68e-10,11;CL:0000557,8.41e-10,7;CL:0000763,4.32e-08,16;CL:0000791,8.27e-08,9;CL:0000789,8.27e-08,9;CL:0002420,8.27e-08,9;CL:0002419,8.27e-08,9;CL:0000790,8.27e-08,9;CL:0002092,4.08e-07,3;CL:0002540,4.08e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,1.61e-07,3;DOID:4045,1.61e-07,3
|ontology_enrichment_uberon=UBERON:0002193!5.61e-09!48;UBERON:0002390!2.43e-08!45;UBERON:0003061!2.43e-08!45;UBERON:0002384!2.57e-07!46;UBERON:0002204!3.11e-07!32;UBERON:0001474!3.22e-07!22;UBERON:0004765!3.22e-07!22;UBERON:0001434!3.22e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.64e-21,46;UBERON:0002371,2.71e-15,16;UBERON:0001474,3.37e-14,22;UBERON:0004765,3.37e-14,22;UBERON:0001434,3.37e-14,22;UBERON:0002204,5.06e-14,32;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,2.25e-09,45;UBERON:0003061,2.25e-09,45
|phase1_expression=2.08193501236232,0,0,0,0,0,0,4.51931632045517,0.84473233291,1.63845168425395,0,0.159544317990673,3.0816131387617,2.09808965805594,0.333109761815663,0.404950534779652,0,1.57731082679119,1.09691546884591,1.69755860719212,0.425216450755349,1.48936426801328,1.56719873483361,0.319984845586813,0.45881856213434,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,26.7860243671621,21.8773896466664,20.9409497589519,27.6468799374577,21.8574555186703,30.5871522409627,0.377690453926732,0.202753862439029,0,0,0.436050312760893,0.219686182734472,0.777719596297134,0.279972843250725,1.43752564364972,1.8456086666351,5.07753499407941,4.03312558970957,0,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,4.04954872776629,5.93319817540185,2.8419204597844,1.79760066311043,2.68952813725088,0,0.135005938331691,0.210324961351382,0.285650984403804,0.883474163806454,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0,0.279182999001381,1.12552522006336,0.61119299110724,0,0.569486723196412,0.372798891650601,0.37863096666592,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0.681721290312231,0.519572009205738,3.18005617059306,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,1.29468941823586,0.445326417194474,1.56136794089522,0.913396434936424,0.691846491768175,1.20578112442098,0.705532242814229,0.628332956648377,0,0.144599356919912,0.884610551949874,0.485300549842228,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0.255457055208591,2.03685711660064,1.19980546198682,1.77898317902291,0.149790639404823,0,0,0.173824320192276,1.27857728665165,0.41557608911912,0.324482526135515,0.305518091550949,0.746441823660558,0,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0.199034266818493,1.40442637462647,3.08817488537658,2.27330799516474,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.324275238183423,0.292399974850665,0,0.671032093801859,0.630869845692382,0.308713837137853,0,0.264450566663544,0.426576501070468,0.232236671860439,0,0.403367049246685,0,0.760902504450237,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.610953983535943,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0,0,0,0.72353147925725,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,0,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.554259570499814,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,1.57635144106191,0.44292937929755,0.956728611944923,0.81931657357869,1.72684981865896,0.723245292907558,0,3.26343410291226,0,0,0.481651769963376,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0.370850604021019,1.02522528478712,0.412773735926445,0.925972636848558,0.941842285023455,0.410082683163076,0.228778173206523,0.849892149969277,1.25956307091292,1.52019971184866,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.330613822901344,0.523511883968059,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.117357238645754,0.5208175393758,0.104859344425711,0.483168241652012,0,1.26404448251271,0.405450430580328,0.205421914329655,0.649604114888975,0.358053391334963,0.596044064343795,0.721172697119813,0.443068581523732,0.706765149637033,0.228620419965,0.403304740547362,0.0974578807397524,1.15454209968395,0.701261413089414,0.680191150845634,0,0.269141569828427,0,0,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,1.81256963593682,0,0.207574695168353,0,0.170733605754134,0,1.04806581313991,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.77468420592983,0.385813221962283,0,0,0.214871054048298,0.382576664137687,1.10295709559758,0.231867835620421
|short_description=p3@Twf2
}}

Latest revision as of 02:42, 26 September 2015

Short description:p3@Twf2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Twf2_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 82bp_to_ENSMUST00000024047, NM_011876, uc009rjf.1_5end
EntrezGene:Twf2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Twf2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.07e-2132
hematopoietic oligopotent progenitor cell1.07e-2132
hematopoietic stem cell1.07e-2132
hematopoietic multipotent progenitor cell1.07e-2132
connective tissue cell9.64e-2146
mesenchymal cell9.64e-2146
motile cell3.13e-1854
leukocyte1.44e-1417
nongranular leukocyte1.44e-1417
hematopoietic lineage restricted progenitor cell3.57e-1425
stem cell3.98e-1397
somatic stem cell2.34e-1291
multi fate stem cell2.34e-1291
lymphoid lineage restricted progenitor cell5.08e-1212
common myeloid progenitor8.14e-1219
lymphocyte6.00e-1113
common lymphoid progenitor6.00e-1113
T cell1.68e-1011
pro-T cell1.68e-1011
granulocyte monocyte progenitor cell8.41e-107
myeloid cell4.32e-0816
mature alpha-beta T cell8.27e-089
alpha-beta T cell8.27e-089
immature T cell8.27e-089
mature T cell8.27e-089
immature alpha-beta T cell8.27e-089
bone marrow cell4.08e-073
mesenchymal stem cell of the bone marrow4.08e-073

Uber anatomy
Ontology termp-valuen
connective tissue9.64e-2146
bone marrow2.71e-1516
bone element3.37e-1422
skeletal element3.37e-1422
skeletal system3.37e-1422
musculoskeletal system5.06e-1432
hemolymphoid system1.24e-0948
immune system1.24e-0948
hematopoietic system2.25e-0945
blood island2.25e-0945

Disease
Ontology termp-valuen
musculoskeletal system cancer1.61e-073
muscle cancer1.61e-073
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