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FFCP PHASE1:Mm9::chr19:6932663..6932668,-: Difference between revisions

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(Created page with "{{FFCP |id=chr19:6932663..6932668,- |short_description=p2@Ccdc88b |description=CAGE_peak_2_at_Ccdc88b_5end |association_with_transcript=32bp_to_ENSMUST00000080351,ENSMUST0...")
 
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{{FFCP
{{FFCP
|id=chr19:6932663..6932668,-
|DHSsupport=NA
|short_description=p2@Ccdc88b
|DPIdataset=NA
|description=CAGE_peak_2_at_Ccdc88b_5end
|association_with_transcript=32bp_to_ENSMUST00000080351,ENSMUST00000113440,NM_001081291,uc008gjb.1_5end
|EntrezGene=78317
|EntrezGene=78317
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=E9Q8T5,Q4QRL3
|UniProt=E9Q8T5,Q4QRL3
|association_with_transcript=32bp_to_ENSMUST00000080351,ENSMUST00000113440,NM_001081291,uc008gjb.1_5end
|cluster_id=chr19:6932663..6932668,-
|description=CAGE_peak_2_at_Ccdc88b_5end
|id=chr19:6932663..6932668,-
|ontology_enrichment_celltype=CL:0000838!7.32e-11!12;CL:0000084!8.25e-11!11;CL:0000827!8.25e-11!11;CL:0000738!1.62e-10!17;CL:0002087!1.62e-10!17;CL:0000542!1.12e-09!13;CL:0000051!1.12e-09!13;CL:0000988!1.86e-09!32;CL:0002032!1.86e-09!32;CL:0000037!1.86e-09!32;CL:0000566!1.86e-09!32;CL:0000837!1.86e-09!32;CL:0000791!2.24e-09!9;CL:0000789!2.24e-09!9;CL:0002420!2.24e-09!9;CL:0002419!2.24e-09!9;CL:0000790!2.24e-09!9;CL:0000624!2.33e-08!8;CL:0002031!6.91e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000791,6.98e-20,9;CL:0000789,6.98e-20,9;CL:0002420,6.98e-20,9;CL:0002419,6.98e-20,9;CL:0000790,6.98e-20,9;CL:0000084,1.20e-19,11;CL:0000827,1.20e-19,11;CL:0000838,7.86e-18,12;CL:0000624,1.69e-17,8;CL:0000738,5.47e-17,17;CL:0002087,5.47e-17,17;CL:0000542,2.71e-16,13;CL:0000051,2.71e-16,13;CL:0000893,2.24e-13,6;CL:0002489,2.24e-13,6;CL:0000898,2.24e-13,6;CL:0000809,2.24e-13,6;CL:0000810,2.24e-13,6;CL:0000895,2.24e-13,6;CL:0000808,2.24e-13,6;CL:0000894,2.24e-13,6;CL:0000806,2.24e-13,6;CL:0000807,2.24e-13,6;CL:0000805,2.24e-13,6;CL:0002425,2.24e-13,6;CL:0002436,2.24e-13,6;CL:0002427,2.24e-13,6;CL:0002428,2.24e-13,6;CL:0002429,2.24e-13,6;CL:0002433,2.24e-13,6;CL:0002431,2.24e-13,6;CL:0002432,2.24e-13,6;CL:0002031,1.09e-10,25;CL:0000988,4.09e-09,32;CL:0002032,4.09e-09,32;CL:0000037,4.09e-09,32;CL:0000837,4.09e-09,32;CL:0000473,2.69e-07,7;CL:0000682,5.32e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!4.25e-21!48;UBERON:0002390!4.95e-19!45;UBERON:0003061!4.95e-19!45;UBERON:0004177!1.54e-18!29;UBERON:0002405!4.08e-17!70;UBERON:0003408!4.87e-16!24;UBERON:0002370!1.97e-15!23;UBERON:0000974!1.97e-15!23;UBERON:0004807!1.97e-15!23;UBERON:0005058!1.97e-15!23;UBERON:0003351!1.97e-15!23;UBERON:0009113!1.97e-15!23;UBERON:0003295!1.97e-15!23;UBERON:0009722!1.97e-15!23;UBERON:0005562!1.97e-15!23;UBERON:0007690!1.97e-15!23;UBERON:0006562!1.97e-14!24;UBERON:0001557!1.97e-14!24;UBERON:0001042!1.97e-14!24;UBERON:0008814!1.97e-14!24;UBERON:0009145!1.97e-14!24;UBERON:0005057!4.59e-13!51;UBERON:0000072!6.65e-12!27;UBERON:0001004!6.36e-11!42;UBERON:0000065!2.16e-10!41;UBERON:0003929!8.53e-10!55;UBERON:0005911!9.23e-10!69;UBERON:0004119!2.46e-08!130;UBERON:0000925!2.46e-08!130;UBERON:0006595!2.46e-08!130;UBERON:0001007!3.06e-08!128;UBERON:0001555!3.06e-08!128;UBERON:0007026!3.06e-08!128;UBERON:0000490!5.45e-08!66;UBERON:0001041!1.22e-07!92;UBERON:0004921!1.70e-07!126;UBERON:0004185!1.70e-07!126;UBERON:0000063!1.95e-07!35;UBERON:0000077!4.69e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.08e-33,29;UBERON:0005057,1.08e-33,29;UBERON:0002370,3.35e-33,23;UBERON:0000974,3.35e-33,23;UBERON:0004807,3.35e-33,23;UBERON:0005058,3.35e-33,23;UBERON:0003351,3.35e-33,23;UBERON:0009113,3.35e-33,23;UBERON:0003295,3.35e-33,23;UBERON:0009722,3.35e-33,23;UBERON:0005562,3.35e-33,23;UBERON:0007690,3.35e-33,23;UBERON:0006562,1.29e-31,24;UBERON:0003408,1.29e-31,24;UBERON:0001557,1.29e-31,24;UBERON:0001042,1.29e-31,24;UBERON:0008814,1.29e-31,24;UBERON:0009145,1.29e-31,24;UBERON:0000072,1.47e-27,27;UBERON:0000077,5.72e-27,35;UBERON:0002193,4.82e-26,48;UBERON:0002405,4.82e-26,48;UBERON:0002390,7.29e-26,45;UBERON:0003061,7.29e-26,45;UBERON:0007811,1.85e-19,36;UBERON:0000065,1.67e-16,41;UBERON:0001004,5.37e-16,42;UBERON:0000153,1.63e-15,43;UBERON:0003929,1.96e-12,55;UBERON:0000490,4.20e-12,66;UBERON:0003081,1.77e-10,87;UBERON:0002368,8.45e-10,60;UBERON:0005911,6.18e-09,69;UBERON:0001041,8.68e-09,80;UBERON:0002530,1.07e-08,65;UBERON:0000926,2.21e-08,120;UBERON:0004120,2.21e-08,120;UBERON:0006603,2.21e-08,120;UBERON:0000949,2.02e-07,72
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,1.34303417529512,0.700837921786577,1.67860320474049,2.67498572088167,3.7450324211519,1.54096171402954,2.15384829287408,1.88320802924326,2.18551006047494,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.0850432901510698,1.98581902401771,0.783599367416806,0.47997726838022,0.91763712426868,2.8711598205751,1.29228598847722,1.29282739611533,0,0,1.55211357458713,0,0,0,0,0,0,1.67412652294763,0,4.18818995179039,1.76469446409304,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,8.4023449785616,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0.346970653532272,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,1.02522528478712,0.206386867963223,1.11116716421827,0.565105371014073,0.136694227721025,1.14389086603261,0.169978429993855,0.279902904647316,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,4.4241556887945,0.810900861160657,1.23253148597793,2.33857481360031,1.43221356533985,2.38417625737518,3.36547258655913,3.10148007066612,4.4425237977185,2.81965184623499,2.72230699869469,4.38560463328886,4.2333210321745,3.62318396762864,0,0,0,0,0,0.375364950902364,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,1.34303417529512,0.700837921786577,1.67860320474049,2.67498572088167,3.7450324211519,1.54096171402954,2.15384829287408,1.88320802924326,2.18551006047494,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.0850432901510698,1.98581902401771,0.783599367416806,0.47997726838022,0.91763712426868,2.8711598205751,1.29228598847722,1.29282739611533,0,0,1.55211357458713,0,0,0,0,0,0,1.67412652294763,0,4.18818995179039,1.76469446409304,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,8.4023449785616,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0.346970653532272,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,1.02522528478712,0.206386867963223,1.11116716421827,0.565105371014073,0.136694227721025,1.14389086603261,0.169978429993855,0.279902904647316,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,4.4241556887945,0.810900861160657,1.23253148597793,2.33857481360031,1.43221356533985,2.38417625737518,3.36547258655913,3.10148007066612,4.4425237977185,2.81965184623499,2.72230699869469,4.38560463328886,4.2333210321745,3.62318396762864,0,0,0,0,0,0.375364950902364,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0
|short_description=p2@Ccdc88b
}}
}}

Latest revision as of 03:16, 26 September 2015

Short description:p2@Ccdc88b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ccdc88b_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 32bp_to_ENSMUST00000080351, ENSMUST00000113440, NM_001081291, uc008gjb.1_5end
EntrezGene:Ccdc88b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ccdc88b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A24.39
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell6.98e-209
alpha-beta T cell6.98e-209
immature T cell6.98e-209
mature T cell6.98e-209
immature alpha-beta T cell6.98e-209
T cell1.20e-1911
pro-T cell1.20e-1911
lymphoid lineage restricted progenitor cell7.86e-1812
CD4-positive, alpha-beta T cell1.69e-178
leukocyte5.47e-1717
nongranular leukocyte5.47e-1717
lymphocyte2.71e-1613
common lymphoid progenitor2.71e-1613
thymocyte2.24e-136
double negative thymocyte2.24e-136
naive T cell2.24e-136
double-positive, alpha-beta thymocyte2.24e-136
CD4-positive, alpha-beta thymocyte2.24e-136
naive thymus-derived CD4-positive, alpha-beta T cell2.24e-136
DN4 thymocyte2.24e-136
DN1 thymic pro-T cell2.24e-136
DN2 thymocyte2.24e-136
DN3 thymocyte2.24e-136
immature single positive thymocyte2.24e-136
early T lineage precursor2.24e-136
mature CD4 single-positive thymocyte2.24e-136
resting double-positive thymocyte2.24e-136
double-positive blast2.24e-136
CD69-positive double-positive thymocyte2.24e-136
CD69-positive, CD4-positive single-positive thymocyte2.24e-136
CD4-positive, CD8-intermediate double-positive thymocyte2.24e-136
CD24-positive, CD4 single-positive thymocyte2.24e-136
hematopoietic lineage restricted progenitor cell1.09e-1025
hematopoietic cell4.09e-0932
hematopoietic oligopotent progenitor cell4.09e-0932
hematopoietic stem cell4.09e-0932
hematopoietic multipotent progenitor cell4.09e-0932
defensive cell2.69e-077
M cell of gut5.32e-073

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.08e-3329
immune organ1.08e-3329
thymus3.35e-3323
neck3.35e-3323
respiratory system epithelium3.35e-3323
hemolymphoid system gland3.35e-3323
pharyngeal epithelium3.35e-3323
thymic region3.35e-3323
pharyngeal gland3.35e-3323
entire pharyngeal arch endoderm3.35e-3323
thymus primordium3.35e-3323
early pharyngeal endoderm3.35e-3323
pharynx1.29e-3124
gland of gut1.29e-3124
upper respiratory tract1.29e-3124
chordate pharynx1.29e-3124
pharyngeal arch system1.29e-3124
pharyngeal region of foregut1.29e-3124
segment of respiratory tract1.47e-2727
mixed endoderm/mesoderm-derived structure5.72e-2735
hemolymphoid system4.82e-2648
immune system4.82e-2648
hematopoietic system7.29e-2645
blood island7.29e-2645
craniocervical region1.85e-1936
respiratory tract1.67e-1641
respiratory system5.37e-1642
anterior region of body1.63e-1543
gut epithelium1.96e-1255
unilaminar epithelium4.20e-1266
lateral plate mesoderm1.77e-1087
endocrine gland8.45e-1060
endo-epithelium6.18e-0969
foregut8.68e-0980
gland1.07e-0865
mesoderm2.21e-08120
mesoderm-derived structure2.21e-08120
presumptive mesoderm2.21e-08120
endocrine system2.02e-0772
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