Personal tools

FFCP PHASE1:Mm9::chr4:109959186..109959222,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:109959186..109959222,-
|DHSsupport=NA
|short_description=p2@Elavl4
|DPIdataset=NA
|description=CAGE_peak_2_at_Elavl4_5end
|association_with_transcript=0bp_to_ENSMUST00000138972_5end
|EntrezGene=15572
|EntrezGene=15572
|HGNC=
|HGNC=
|MCL_coexpression_id=826
|TSSclassifier=NA
|UniProt=A2A9R4
|UniProt=A2A9R4
|association_with_transcript=0bp_to_ENSMUST00000138972_5end
|cluster_id=chr4:109959186..109959222,-
|description=CAGE_peak_2_at_Elavl4_5end
|id=chr4:109959186..109959222,-
|ontology_enrichment_celltype=CL:0000540!1.10e-17!33;CL:0000047!1.10e-17!33;CL:0000031!1.10e-17!33;CL:0000404!1.10e-17!33;CL:0002319!4.10e-13!43;CL:0000221!6.26e-13!44;CL:0000133!6.26e-13!44;CL:0000117!9.86e-13!23;CL:0000337!9.86e-13!23;CL:0000393!2.97e-12!39;CL:0000211!2.97e-12!39;CL:0000055!8.17e-09!50;CL:0000107!6.79e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.04e-19,33;CL:0000047,1.04e-19,33;CL:0000031,1.04e-19,33;CL:0000404,1.04e-19,33;CL:0000117,2.55e-14,23;CL:0000337,2.55e-14,23;CL:0000393,3.34e-14,39;CL:0000211,3.34e-14,39;CL:0002319,1.90e-13,43;CL:0000221,8.74e-13,44;CL:0000133,8.74e-13,44;CL:0000107,1.17e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.78e-29!75;UBERON:0001016!4.78e-29!75;UBERON:0001017!6.09e-29!73;UBERON:0005743!6.09e-29!73;UBERON:0002346!6.67e-26!71;UBERON:0003075!6.67e-26!71;UBERON:0007284!6.67e-26!71;UBERON:0004121!1.09e-25!102;UBERON:0000924!1.09e-25!102;UBERON:0006601!1.09e-25!102;UBERON:0001049!7.11e-21!52;UBERON:0005068!7.11e-21!52;UBERON:0006241!7.11e-21!52;UBERON:0007135!7.11e-21!52;UBERON:0000955!1.18e-19!50;UBERON:0006238!1.18e-19!50;UBERON:0002616!3.42e-19!49;UBERON:0000033!5.67e-19!63;UBERON:0003056!1.17e-17!49;UBERON:0002020!1.45e-16!34;UBERON:0003080!4.84e-16!40;UBERON:0002780!2.25e-15!39;UBERON:0001890!2.25e-15!39;UBERON:0006240!2.25e-15!39;UBERON:0007811!3.22e-14!86;UBERON:0002791!8.58e-14!29;UBERON:0003528!8.58e-14!29;UBERON:0001893!8.58e-14!29;UBERON:0000153!1.40e-12!94;UBERON:0000956!7.77e-10!21;UBERON:0001869!7.77e-10!21;UBERON:0000203!7.77e-10!21;UBERON:0002619!5.64e-08!17;UBERON:0000468!1.81e-07!333;UBERON:0002021!1.95e-07!10;UBERON:0000411!1.95e-07!10;UBERON:0001950!1.95e-07!10;UBERON:0002410!6.79e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-30,75;UBERON:0001017,1.45e-30,73;UBERON:0002346,5.07e-27,64;UBERON:0003075,5.07e-27,64;UBERON:0007284,5.07e-27,64;UBERON:0004121,2.20e-25,95;UBERON:0000924,2.20e-25,95;UBERON:0006601,2.20e-25,95;UBERON:0000073,6.82e-24,54;UBERON:0001049,1.77e-22,52;UBERON:0005068,1.77e-22,52;UBERON:0006241,1.77e-22,52;UBERON:0007135,1.77e-22,52;UBERON:0010371,2.49e-20,73;UBERON:0003056,3.32e-19,49;UBERON:0000955,4.31e-19,47;UBERON:0006238,4.31e-19,47;UBERON:0002616,1.41e-18,46;UBERON:0002020,1.54e-18,34;UBERON:0003080,2.48e-17,40;UBERON:0002780,1.40e-16,39;UBERON:0001890,1.40e-16,39;UBERON:0006240,1.40e-16,39;UBERON:0010314,1.90e-15,92;UBERON:0003528,2.25e-15,29;UBERON:0002791,2.25e-15,29;UBERON:0001893,2.25e-15,29;UBERON:0000956,7.31e-11,21;UBERON:0001869,7.31e-11,21;UBERON:0000203,7.31e-11,21;UBERON:0002619,9.63e-09,17;UBERON:0002021,2.84e-08,10;UBERON:0000411,2.84e-08,10;UBERON:0001950,2.84e-08,10;UBERON:0002410,1.17e-07,9;UBERON:0000010,2.40e-07,11
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0,23.6710259205729,21.1596391708813,21.5502677192101,0,0,0,0,0,1.19840044207362,0.384218305321555,17.4198548678242,12.5555522648472,13.0401476037857,15.7108041422092,18.3320888989839,22.1708346579067,17.0604938412461,13.7882817991503,31.9336054898227,21.7068474744819,21.1977015893616,28.6193244374521,26.0739784266868,16.6692278578163,15.0758819460746,20.8222165711722,21.697351184307,27.4004584490511,26.338760947834,26.8415201988433,1.51452386666368,4.45872204630035,0,0,0,0,0,0,1.26399978118577,0,0,0,0.704217098883403,0,0,0,0,0,0,1.37020655662872,0.258937883647172,2.9688427812965,5.20455980298408,4.87144765299426,3.68984795609694,4.6724018571313,8.11362079236363,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,39.8181883935704,38.7476407604892,0.766371165625774,0,0,0,32.5045687508465,15.5550204958333,18.2198810563653,33.8957424374939,29.9187085076487,32.8305110404105,27.0942909323155,0.203678727700633,0,0,2.31486041475121,2.08192708740326,3.21862946206862,4.86167750474443,3.61691562805716,7.27990540919208,10.8896662242122,6.55912071918102,6.72628763921441,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,1.40715635988658,0.540186184383045,0.710234206755631,0.787056926989615,0.771335564436891,0.697601834251224,0.536546802799238,0.233530684734339,0.16455984991348,0,0,0,0,0,17.6643556793867,25.2116300329247,0,0.264450566663544,4.26576501070468,5.10920678092965,5.92790322081629,5.84882221407693,2.66853652613844,4.75564065281398,1.42358718463353,3.29397909448022,3.51869292320377,4.77495532898762,3.70431765526328,1.79763881730844,1.08069024937347,1.1948476395262,3.60369011810855,5.71242563048644,3.38123207019241,4.88763186828754,5.23671715352589,3.08597607517402,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,26.4908473479857,26.2554177966535,0,0,27.1337068697981,33.9681707538075,54.9329664218637,17.6836910484888,17.1554979043443,16.7015153165411,47.7676627976375,54.0673337135927,56.5261522463529,15.4234231882467,0.283880170416537,0.35613120733451,0,0,0,0.971122544619926,0,0.943025398779491,0.590603785761546,2.15204603560749,3.35956781118687,2.18120237686503,1.06949213515416,2.52829406348653,0,1.03135543248187,5.10659408630682,4.14140516272013,0.776152102696527,2.35770738534752,4.96552654198366,2.85390108163313,5.75921572107423,2.13125464380219,0,0,1.32317038832977,0,0.484393280087717,0.301564624640779,0.119372344003136,0,1.45740418314925,22.4364615432717,0,0.412773735926445,0,0.188368457004691,0,0,0,0.139951452323658,0,0,3.16335993581135,3.25311147402958,3.24016022465404,1.04544148007234,3.9305261474312,1.21377911746339,1.90102948168273,1.30877970992015,1.29614973291793,0,5.6369293868419,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0.864090018773596,0.316011120628178,1.21635129174099,2.2596410576262,5.58659538804519,14.143108957731,19.6694541233452,7.81270421879797,9.45212973917294,2.1202954489111,2.89585865288999,1.31074040677893,0.487289403698762,0.288635524920988,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,31.0613513439387,29.0004898999521,38.3839994004396,28.5276282690521,26.0331357512844,16.6186657425734,24.300810008345,31.9728054289197,34.4388230827996,27.9590568345983,7.05753963572401,7.58147259461959,8.02447947044431,4.61902762429759,8.17491334249131,5.51530525350042,4.88942801163553,4.94484137373346,5.45562656306086,4.80124702351215,5.0695859978048,5.47016390019621,4.86935838843389,7.04276676453562,5.39893408182765,4.76293691283074,3.70829843023538,4.05109362973781,3.70877310722976,5.7407578852415,6.85738504770831,5.50174999093946,4.76872379894642,6.97662799835177,5.45834406408918,4.82303264982556,4.75612729469209,5.5244639401947,4.6173398707593,3.36685362994643,3.79632057997357,4.33419722452479,4.91077251803627,4.64810523557898,4.62975866354739,7.99393849401427,3.97683734357194,6.66100267549725,3.44318997723918,1.54413993383661,1.62307484934295
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0,23.6710259205729,21.1596391708813,21.5502677192101,0,0,0,0,0,1.19840044207362,0.384218305321555,17.4198548678242,12.5555522648472,13.0401476037857,15.7108041422092,18.3320888989839,22.1708346579067,17.0604938412461,13.7882817991503,31.9336054898227,21.7068474744819,21.1977015893616,28.6193244374521,26.0739784266868,16.6692278578163,15.0758819460746,20.8222165711722,21.697351184307,27.4004584490511,26.338760947834,26.8415201988433,1.51452386666368,4.45872204630035,0,0,0,0,0,0,1.26399978118577,0,0,0,0.704217098883403,0,0,0,0,0,0,1.37020655662872,0.258937883647172,2.9688427812965,5.20455980298408,4.87144765299426,3.68984795609694,4.6724018571313,8.11362079236363,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,39.8181883935704,38.7476407604892,0.766371165625774,0,0,0,32.5045687508465,15.5550204958333,18.2198810563653,33.8957424374939,29.9187085076487,32.8305110404105,27.0942909323155,0.203678727700633,0,0,2.31486041475121,2.08192708740326,3.21862946206862,4.86167750474443,3.61691562805716,7.27990540919208,10.8896662242122,6.55912071918102,6.72628763921441,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,1.40715635988658,0.540186184383045,0.710234206755631,0.787056926989615,0.771335564436891,0.697601834251224,0.536546802799238,0.233530684734339,0.16455984991348,0,0,0,0,0,17.6643556793867,25.2116300329247,0,0.264450566663544,4.26576501070468,5.10920678092965,5.92790322081629,5.84882221407693,2.66853652613844,4.75564065281398,1.42358718463353,3.29397909448022,3.51869292320377,4.77495532898762,3.70431765526328,1.79763881730844,1.08069024937347,1.1948476395262,3.60369011810855,5.71242563048644,3.38123207019241,4.88763186828754,5.23671715352589,3.08597607517402,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,26.4908473479857,26.2554177966535,0,0,27.1337068697981,33.9681707538075,54.9329664218637,17.6836910484888,17.1554979043443,16.7015153165411,47.7676627976375,54.0673337135927,56.5261522463529,15.4234231882467,0.283880170416537,0.35613120733451,0,0,0,0.971122544619926,0,0.943025398779491,0.590603785761546,2.15204603560749,3.35956781118687,2.18120237686503,1.06949213515416,2.52829406348653,0,1.03135543248187,5.10659408630682,4.14140516272013,0.776152102696527,2.35770738534752,4.96552654198366,2.85390108163313,5.75921572107423,2.13125464380219,0,0,1.32317038832977,0,0.484393280087717,0.301564624640779,0.119372344003136,0,1.45740418314925,22.4364615432717,0,0.412773735926445,0,0.188368457004691,0,0,0,0.139951452323658,0,0,3.16335993581135,3.25311147402958,3.24016022465404,1.04544148007234,3.9305261474312,1.21377911746339,1.90102948168273,1.30877970992015,1.29614973291793,0,5.6369293868419,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0.864090018773596,0.316011120628178,1.21635129174099,2.2596410576262,5.58659538804519,14.143108957731,19.6694541233452,7.81270421879797,9.45212973917294,2.1202954489111,2.89585865288999,1.31074040677893,0.487289403698762,0.288635524920988,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,31.0613513439387,29.0004898999521,38.3839994004396,28.5276282690521,26.0331357512844,16.6186657425734,24.300810008345,31.9728054289197,34.4388230827996,27.9590568345983,7.05753963572401,7.58147259461959,8.02447947044431,4.61902762429759,8.17491334249131,5.51530525350042,4.88942801163553,4.94484137373346,5.45562656306086,4.80124702351215,5.0695859978048,5.47016390019621,4.86935838843389,7.04276676453562,5.39893408182765,4.76293691283074,3.70829843023538,4.05109362973781,3.70877310722976,5.7407578852415,6.85738504770831,5.50174999093946,4.76872379894642,6.97662799835177,5.45834406408918,4.82303264982556,4.75612729469209,5.5244639401947,4.6173398707593,3.36685362994643,3.79632057997357,4.33419722452479,4.91077251803627,4.64810523557898,4.62975866354739,7.99393849401427,3.97683734357194,6.66100267549725,3.44318997723918,1.54413993383661,1.62307484934295
|short_description=p2@Elavl4
}}
}}

Latest revision as of 03:53, 26 September 2015

Short description:p2@Elavl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Elavl4_5end
Coexpression cluster:MCL_coexpression_mm9:826
Association with transcript: 0bp_to_ENSMUST00000138972_5end
EntrezGene:Elavl4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Elavl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C323.67
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.34
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.84
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B239.82
cerebellum, neonate N30.CNhs11135.1395-42I238.75
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.50
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F118.22
cortex, adult.CNhs10473.12-14D533.90
cortex, neonate N30.CNhs11107.1392-42F229.92
diencephalon, adult.CNhs10482.20-12F232.83
diencephalon, neonate N30.CNhs11201.1388-42B227.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C67.28
eyeball, neonate N01.CNhs11140.1532-43E710.89
eyeball, neonate N02.CNhs11205.1551-44G86.56
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E817.66
hippocampus, neonate N00.CNhs11228.627-43G125.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G73.09
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C226.49
medulla oblongata, neonate N30.CNhs11200.1396-42A326.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.97
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E354.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D447.77
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D554.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D656.53
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C114.14
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C79.45
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I87.06
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H28.02
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.05e-3075
central nervous system1.45e-3073
neurectoderm5.07e-2764
neural plate5.07e-2764
presumptive neural plate5.07e-2764
ectoderm-derived structure2.20e-2595
ectoderm2.20e-2595
presumptive ectoderm2.20e-2595
regional part of nervous system6.82e-2454
neural tube1.77e-2252
neural rod1.77e-2252
future spinal cord1.77e-2252
neural keel1.77e-2252
ecto-epithelium2.49e-2073
pre-chordal neural plate3.32e-1949
brain4.31e-1947
future brain4.31e-1947
regional part of brain1.41e-1846
gray matter1.54e-1834
anterior neural tube2.48e-1740
regional part of forebrain1.40e-1639
forebrain1.40e-1639
future forebrain1.40e-1639
structure with developmental contribution from neural crest1.90e-1592
brain grey matter2.25e-1529
regional part of telencephalon2.25e-1529
telencephalon2.25e-1529
cerebral cortex7.31e-1121
cerebral hemisphere7.31e-1121
pallium7.31e-1121
regional part of cerebral cortex9.63e-0917
occipital lobe2.84e-0810
visual cortex2.84e-0810
neocortex2.84e-0810
autonomic nervous system1.17e-079
peripheral nervous system2.40e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:109959186..109959222,-&oldid=4231523"