FFCP PHASE1:Mm9::chr14:56364484..56364495,-: Difference between revisions
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{{FFCP|EntrezGene=52585|HGNC=|MCL_coexpression_id=60|UniProt=Q3TVU9,Q99L04|association_with_transcript=25bp_to_NM_026819,uc007uan.2_5end|description=CAGE_peak_4_at_Dhrs1_5end|id=chr14:56364484..56364495,-|ontology_enrichment_celltype=CL:0000117!7.40e-10!23;CL:0000337!7.40e-10!23;CL:0000221!1.43e-07!44;CL:0000133!1.43e-07!44;CL:0002319!3.28e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.64e-15,23;CL:0000337,6.64e-15,23;CL:0000540,1.80e-10,33;CL:0000047,1.80e-10,33;CL:0000031,1.80e-10,33;CL:0000404,1.80e-10,33;CL:0000221,1.48e-09,44;CL:0000133,1.48e-09,44;CL:0002319,5.46e-09,43;CL:0000393,7.46e-08,39;CL:0000211,7.46e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.40e-22!52;UBERON:0005068!4.40e-22!52;UBERON:0006241!4.40e-22!52;UBERON:0007135!4.40e-22!52;UBERON:0001017!2.44e-21!73;UBERON:0005743!2.44e-21!73;UBERON:0000955!4.19e-21!50;UBERON:0006238!4.19e-21!50;UBERON:0000073!8.64e-21!75;UBERON:0001016!8.64e-21!75;UBERON:0002616!1.63e-20!49;UBERON:0000033!9.40e-20!63;UBERON:0002346!1.37e-17!71;UBERON:0003075!1.37e-17!71;UBERON:0007284!1.37e-17!71;UBERON:0003080!2.27e-15!40;UBERON:0002020!5.62e-15!34;UBERON:0002780!9.10e-15!39;UBERON:0001890!9.10e-15!39;UBERON:0006240!9.10e-15!39;UBERON:0004121!1.63e-14!102;UBERON:0000924!1.63e-14!102;UBERON:0006601!1.63e-14!102;UBERON:0003056!1.83e-14!49;UBERON:0007811!8.34e-14!86;UBERON:0000153!3.79e-13!94;UBERON:0002791!2.07e-12!29;UBERON:0003528!2.07e-12!29;UBERON:0001893!2.07e-12!29;UBERON:0000956!6.92e-10!21;UBERON:0001869!6.92e-10!21;UBERON:0000203!6.92e-10!21;UBERON:0000025!6.73e-09!114;UBERON:0004111!1.46e-08!122;UBERON:0002619!2.53e-08!17;UBERON:0003076!1.67e-07!12;UBERON:0003057!1.67e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-35,54;UBERON:0001049,2.24e-33,52;UBERON:0005068,2.24e-33,52;UBERON:0006241,2.24e-33,52;UBERON:0007135,2.24e-33,52;UBERON:0001017,8.31e-32,73;UBERON:0001016,1.77e-30,75;UBERON:0002346,1.98e-29,64;UBERON:0003075,1.98e-29,64;UBERON:0007284,1.98e-29,64;UBERON:0000955,1.68e-28,47;UBERON:0006238,1.68e-28,47;UBERON:0002616,1.58e-27,46;UBERON:0010314,5.02e-27,92;UBERON:0010371,3.19e-26,73;UBERON:0004121,2.03e-24,95;UBERON:0000924,2.03e-24,95;UBERON:0006601,2.03e-24,95;UBERON:0002020,3.80e-22,34;UBERON:0003080,4.76e-22,40;UBERON:0002780,4.81e-21,39;UBERON:0001890,4.81e-21,39;UBERON:0006240,4.81e-21,39;UBERON:0003056,2.67e-19,49;UBERON:0003528,8.49e-18,29;UBERON:0002791,8.49e-18,29;UBERON:0001893,8.49e-18,29;UBERON:0004111,4.80e-15,122;UBERON:0000025,8.01e-15,114;UBERON:0000956,1.43e-12,21;UBERON:0001869,1.43e-12,21;UBERON:0000203,1.43e-12,21;UBERON:0003076,7.58e-12,12;UBERON:0003057,7.58e-12,12;UBERON:0002619,4.54e-11,17;UBERON:0002021,1.30e-09,10;UBERON:0000411,1.30e-09,10;UBERON:0001950,1.30e-09,10;UBERON:0000483,1.95e-09,174;UBERON:0000119,3.99e-09,176;UBERON:0002240,9.52e-07,6;UBERON:0005174,9.52e-07,6;UBERON:0001137,9.52e-07,6|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0,0,0.171217968225505,0,0,0.437102012094987,0.333109761815663,0,0,0.630924330716475,0,0.42438965179803,3.40173160604279,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0.418531630736908,0,0,1.76469446409304,0,0.971020706062307,0.629484089877886,0.101376931219515,0.183546752161682,1.56478268869608,1.52617609466313,0.878744730937887,0.777719596297134,1.1198913730029,0,0,0.725362142011344,0,0.771778308107841,0.573066879877513,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.768436610643109,1.97010263386108,0.945041568321835,1.26194976810829,3.42781181284564,3.09215957332259,1.10241719293459,1.24599112323707,1.83843757322004,2.20231761998777,2.80912143787413,2.91852413186863,1.71452174049252,1.9212405156506,0,3.07101298901519,5.06486349028512,2.13917546887534,1.47314292736834,1.28134512719193,1.86399445825301,0.37863096666592,0.529000920747499,0,0,0,0,0.649776417447669,0.448026887097336,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,1.54927761754349,0,0,0,0.649473123033642,0,0.505524445014783,0.5709193985953,0,0,0.346970653532272,0,0.461230994512117,0.904335843315735,0.470354828542819,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0.662524555381181,0,0,1.75668478206928,1.46612694769419,0.255457055208591,0,0,0,2.84602214869163,1.83000241127451,1.25654352112864,2.9550134432687,4.60287823194595,2.28566849015516,3.0825839982874,0.712875546952214,0.373220911830279,0.758168275301024,0,1.56144531555244,0.689706313300419,0.360124259610698,1.05493372485001,0.680364991513279,1.0249097622788,0.374806898238915,0.776110112217047,0.646703978798527,0.378212160335639,0.703804496655795,0.43839146485515,1.11218899690239,0.696504333044333,0.411564272815887,0.995171334092466,0,0.772043721344145,0,1.24275463521301,1.17263029990548,0.900310307305074,1.65721314909647,0.590292695242212,0.308534225774757,0.697601834251224,1.07309360559848,1.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52585 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TVU9,Q99L04 | |||
|association_with_transcript=25bp_to_NM_026819,uc007uan.2_5end | |||
|cluster_id=chr14:56364484..56364495,- | |||
|description=CAGE_peak_4_at_Dhrs1_5end | |||
|id=chr14:56364484..56364495,- | |||
|ontology_enrichment_celltype=CL:0000117!7.40e-10!23;CL:0000337!7.40e-10!23;CL:0000221!1.43e-07!44;CL:0000133!1.43e-07!44;CL:0002319!3.28e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.64e-15,23;CL:0000337,6.64e-15,23;CL:0000540,1.80e-10,33;CL:0000047,1.80e-10,33;CL:0000031,1.80e-10,33;CL:0000404,1.80e-10,33;CL:0000221,1.48e-09,44;CL:0000133,1.48e-09,44;CL:0002319,5.46e-09,43;CL:0000393,7.46e-08,39;CL:0000211,7.46e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.40e-22!52;UBERON:0005068!4.40e-22!52;UBERON:0006241!4.40e-22!52;UBERON:0007135!4.40e-22!52;UBERON:0001017!2.44e-21!73;UBERON:0005743!2.44e-21!73;UBERON:0000955!4.19e-21!50;UBERON:0006238!4.19e-21!50;UBERON:0000073!8.64e-21!75;UBERON:0001016!8.64e-21!75;UBERON:0002616!1.63e-20!49;UBERON:0000033!9.40e-20!63;UBERON:0002346!1.37e-17!71;UBERON:0003075!1.37e-17!71;UBERON:0007284!1.37e-17!71;UBERON:0003080!2.27e-15!40;UBERON:0002020!5.62e-15!34;UBERON:0002780!9.10e-15!39;UBERON:0001890!9.10e-15!39;UBERON:0006240!9.10e-15!39;UBERON:0004121!1.63e-14!102;UBERON:0000924!1.63e-14!102;UBERON:0006601!1.63e-14!102;UBERON:0003056!1.83e-14!49;UBERON:0007811!8.34e-14!86;UBERON:0000153!3.79e-13!94;UBERON:0002791!2.07e-12!29;UBERON:0003528!2.07e-12!29;UBERON:0001893!2.07e-12!29;UBERON:0000956!6.92e-10!21;UBERON:0001869!6.92e-10!21;UBERON:0000203!6.92e-10!21;UBERON:0000025!6.73e-09!114;UBERON:0004111!1.46e-08!122;UBERON:0002619!2.53e-08!17;UBERON:0003076!1.67e-07!12;UBERON:0003057!1.67e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-35,54;UBERON:0001049,2.24e-33,52;UBERON:0005068,2.24e-33,52;UBERON:0006241,2.24e-33,52;UBERON:0007135,2.24e-33,52;UBERON:0001017,8.31e-32,73;UBERON:0001016,1.77e-30,75;UBERON:0002346,1.98e-29,64;UBERON:0003075,1.98e-29,64;UBERON:0007284,1.98e-29,64;UBERON:0000955,1.68e-28,47;UBERON:0006238,1.68e-28,47;UBERON:0002616,1.58e-27,46;UBERON:0010314,5.02e-27,92;UBERON:0010371,3.19e-26,73;UBERON:0004121,2.03e-24,95;UBERON:0000924,2.03e-24,95;UBERON:0006601,2.03e-24,95;UBERON:0002020,3.80e-22,34;UBERON:0003080,4.76e-22,40;UBERON:0002780,4.81e-21,39;UBERON:0001890,4.81e-21,39;UBERON:0006240,4.81e-21,39;UBERON:0003056,2.67e-19,49;UBERON:0003528,8.49e-18,29;UBERON:0002791,8.49e-18,29;UBERON:0001893,8.49e-18,29;UBERON:0004111,4.80e-15,122;UBERON:0000025,8.01e-15,114;UBERON:0000956,1.43e-12,21;UBERON:0001869,1.43e-12,21;UBERON:0000203,1.43e-12,21;UBERON:0003076,7.58e-12,12;UBERON:0003057,7.58e-12,12;UBERON:0002619,4.54e-11,17;UBERON:0002021,1.30e-09,10;UBERON:0000411,1.30e-09,10;UBERON:0001950,1.30e-09,10;UBERON:0000483,1.95e-09,174;UBERON:0000119,3.99e-09,176;UBERON:0002240,9.52e-07,6;UBERON:0005174,9.52e-07,6;UBERON:0001137,9.52e-07,6 | |||
|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0,0,0.171217968225505,0,0,0.437102012094987,0.333109761815663,0,0,0.630924330716475,0,0.42438965179803,3.40173160604279,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0.418531630736908,0,0,1.76469446409304,0,0.971020706062307,0.629484089877886,0.101376931219515,0.183546752161682,1.56478268869608,1.52617609466313,0.878744730937887,0.777719596297134,1.1198913730029,0,0,0.725362142011344,0,0.771778308107841,0.573066879877513,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.768436610643109,1.97010263386108,0.945041568321835,1.26194976810829,3.42781181284564,3.09215957332259,1.10241719293459,1.24599112323707,1.83843757322004,2.20231761998777,2.80912143787413,2.91852413186863,1.71452174049252,1.9212405156506,0,3.07101298901519,5.06486349028512,2.13917546887534,1.47314292736834,1.28134512719193,1.86399445825301,0.37863096666592,0.529000920747499,0,0,0,0,0.649776417447669,0.448026887097336,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,1.54927761754349,0,0,0,0.649473123033642,0,0.505524445014783,0.5709193985953,0,0,0.346970653532272,0,0.461230994512117,0.904335843315735,0.470354828542819,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0.662524555381181,0,0,1.75668478206928,1.46612694769419,0.255457055208591,0,0,0,2.84602214869163,1.83000241127451,1.25654352112864,2.9550134432687,4.60287823194595,2.28566849015516,3.0825839982874,0.712875546952214,0.373220911830279,0.758168275301024,0,1.56144531555244,0.689706313300419,0.360124259610698,1.05493372485001,0.680364991513279,1.0249097622788,0.374806898238915,0.776110112217047,0.646703978798527,0.378212160335639,0.703804496655795,0.43839146485515,1.11218899690239,0.696504333044333,0.411564272815887,0.995171334092466,0,0.772043721344145,0,1.24275463521301,1.17263029990548,0.900310307305074,1.65721314909647,0.590292695242212,0.308534225774757,0.697601834251224,1.07309360559848,1.28441876603886,1.31647879930784,1.97000956894914,1.62137619091711,1.31579988682799,0.219550115291051,0.671032093801859,1.68231958851302,3.39585220851639,0.330418782983798,0.264450566663544,1.49301775374664,0.464473343720877,0.644337306610467,0.403367049246685,0.667134131534611,0.570676878337677,0,0.329397909448022,0.754005626400808,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0.569003702859245,0.228497025219458,0,0.610953983535943,0.969762435838129,0.49095073923223,0.822074982615345,0.738050739898011,0.627994911365499,0.616985819609003,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0.184753190166605,1.13694847062291,0.488894929326078,0.169745085775188,1.17345124144251,0.335012514883631,0,0,0.630540576424764,0.221464689648775,0.797273843287435,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,4.81651769963376,3.7507739709505,0.983609672260053,1.51482556322624,0.315508219416257,1.56175497718655,0.430846795465598,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0.425820255624806,0.712262414669021,0.325773918707152,0.824850614862677,0,0.242780636154981,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,1.08036656418786,2.19909762430683,2.14337035031592,1.41872186913819,0.178368817602071,0.658196082408484,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.120625849856312,0.238744688006273,0.328281799490123,0,3.33765543618917,0.854354403989263,0.412773735926445,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,0.632671987162271,1.01659733563424,0.540026704109006,0.418176592028937,1.09181281873089,0.404593039154462,0.578574190077352,0,0.259229946583586,0.621339313086926,20.2929457926309,1.04661582230785,0.992750942742586,0.972255941720238,0.904118764344118,0.168956125490778,0.704143431874524,0.651021924219751,0.734015410979976,6.76435538312817,8.92893019399383,0.316011120628178,1.01362607645082,0.205421914329655,0.129920822977795,0.895133478337407,1.19208812868759,1.20195449519969,1.32920574457119,0.605798699688886,0.838274873204998,1.31074040677893,0.779663045918019,0.384847366561318,0.350630706544707,0,0,0,0.167884616364078,0.19318959403219,0.563047426353546,0.915758121336325,0,1.50471631210609,1.6942555278512,3.22227665555024,1.71868654031819,3.09335728218638,1.37016503954128,1.5107877947794,1.35004500046361,2.70192721934532,1.35942722695261,3.10656187051092,1.14166082342594,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.735374033800057,0.666740183404846,0.824140228955577,0,1.51618327058278,1.01391719956096,0.565879024158229,0.842773567228942,0.576226371643824,0.402048282689293,0.952587382566147,0.811190281613988,0.964546102318525,1.23625770240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| |||
|short_description=p4@Dhrs1 | |||
}} |
Latest revision as of 03:55, 26 September 2015
Short description: | p4@Dhrs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dhrs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 25bp_to_NM_026819, uc007uan.2_5end |
EntrezGene: | Dhrs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.64e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.64e-15 | 23 |
neuron | 1.80e-10 | 33 |
neuronal stem cell | 1.80e-10 | 33 |
neuroblast | 1.80e-10 | 33 |
electrically signaling cell | 1.80e-10 | 33 |
ectodermal cell | 1.48e-09 | 44 |
neurectodermal cell | 1.48e-09 | 44 |
neural cell | 5.46e-09 | 43 |
electrically responsive cell | 7.46e-08 | 39 |
electrically active cell | 7.46e-08 | 39 |