FFCP PHASE1:Mm9::chr7:148633544..148633554,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:148633544..148633554,+ to FFCP PHASE1:Mm9::chr7:148633544..148633554,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67186 | |EntrezGene=67186 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=776 | |||
|TSSclassifier=NA | |||
|UniProt=P99027 | |UniProt=P99027 | ||
|association_with_transcript=0bp_to_NM_026020,uc009klf.1_5end | |||
|cluster_id=chr7:148633544..148633554,+ | |||
|description=CAGE_peak_1_at_Rplp2_5end | |||
|id=chr7:148633544..148633554,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.27e-33!121;CL:0000012!1.27e-33!121;CL:0000548!4.41e-32!115;CL:0000004!4.41e-32!115;CL:0000255!4.41e-32!115;CL:0002371!6.45e-32!118;CL:0000034!4.95e-27!97;CL:0000723!1.89e-24!91;CL:0000048!1.89e-24!91;CL:0000063!8.11e-24!66;CL:0000219!1.45e-22!54;CL:0002320!3.11e-20!46;CL:0000134!3.11e-20!46;CL:0000988!4.92e-18!32;CL:0002032!4.92e-18!32;CL:0000037!4.92e-18!32;CL:0000566!4.92e-18!32;CL:0000837!4.92e-18!32;CL:0002031!2.13e-14!25;CL:0000049!7.63e-11!19;CL:0000738!4.49e-10!17;CL:0002087!4.49e-10!17;CL:0002321!4.43e-09!70;CL:0000220!4.43e-09!70;CL:0000763!6.14e-09!16;CL:0000838!1.80e-08!12;CL:0000542!2.81e-08!13;CL:0000051!2.81e-08!13;CL:0000084!7.21e-08!11;CL:0000827!7.21e-08!11;CL:0000839!2.81e-07!13;CL:0000055!3.99e-07!50;CL:0000791!4.12e-07!9;CL:0000789!4.12e-07!9;CL:0002420!4.12e-07!9;CL:0002419!4.12e-07!9;CL:0000790!4.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.95e-27,97;CL:0000723,1.89e-24,91;CL:0000048,1.89e-24,91;CL:0000219,1.45e-22,54;CL:0002320,3.11e-20,46;CL:0000134,3.11e-20,46;CL:0000988,4.92e-18,32;CL:0002032,4.92e-18,32;CL:0000037,4.92e-18,32;CL:0000837,4.92e-18,32;CL:0002031,2.13e-14,25;CL:0000049,7.63e-11,19;CL:0000738,4.49e-10,17;CL:0002087,4.49e-10,17;CL:0002321,4.43e-09,70;CL:0000763,6.14e-09,16;CL:0000838,1.80e-08,12;CL:0000542,2.81e-08,13;CL:0000051,2.81e-08,13;CL:0000084,7.21e-08,11;CL:0000827,7.21e-08,11;CL:0000839,2.81e-07,13;CL:0000791,4.12e-07,9;CL:0000789,4.12e-07,9;CL:0002420,4.12e-07,9;CL:0002419,4.12e-07,9;CL:0000790,4.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.11e-20!46;UBERON:0002390!2.00e-09!45;UBERON:0003061!2.00e-09!45;UBERON:0002371!2.23e-09!16;UBERON:0002193!2.31e-09!48;UBERON:0001474!8.44e-07!22;UBERON:0004765!8.44e-07!22;UBERON:0001434!8.44e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.11e-20,46;UBERON:0002390,2.00e-09,45;UBERON:0003061,2.00e-09,45;UBERON:0002371,2.23e-09,16;UBERON:0002193,2.31e-09,48;UBERON:0002405,2.31e-09,48;UBERON:0001474,8.44e-07,22;UBERON:0004765,8.44e-07,22;UBERON:0001434,8.44e-07,22 | |||
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|phase1_expression=628.584224886316,382.47704677274,488.214183864972,257.397043822112,295.027584938398,816.39689930752,804.328321570395,1507.38567785696,2819.15337236497,2829.37199418026,1933.05086126595,1294.38305185833,1975.48522267618,1674.45038793348,1129.57520231691,835.615428517812,1394.2268231094,1293.2371468861,1144.76840617431,1671.24644878064,235.825043588916,992.512348204049,1013.45518185907,654.20901680224,771.73282150996,811.389765294524,942.076485599897,711.055067863434,605.034567549095,845.309055214808,945.015436412909,1331.02429157139,1302.70722010412,855.801077483369,1398.90839445542,1643.2294693687,1431.02301804295,332.732646435842,872.751579833085,461.74794218489,251.763076877274,333.326196659722,306.357032762658,367.870502124637,437.644212074644,518.152481352427,2110.89184705101,1336.71223376852,546.139850277897,769.164680737865,1674.37758906096,1431.77554107512,1685.04071263785,2995.74564650685,3018.45841009847,1015.66025346992,1164.75843335105,811.667873244694,684.841220009738,502.012439329159,1132.02288666204,2259.75418436904,2297.93775315118,1490.233931818,1620.75196824727,1971.58231897543,1264.01286627715,1113.08043051654,637.483736472521,878.213628847648,875.372489144452,564.73199616632,506.893301483953,780.633863396902,716.82827774539,1332.86724058453,423.946141847647,241.71213099526,256.676517071183,609.974080752147,534.19635099447,648.537146343166,363.217081700797,464.279153276136,336.308943356759,459.915221924395,399.352564641484,605.239000594751,547.576103992254,404.232275011196,521.176350685617,528.300260466571,661.612107697641,500.844561839894,309.29357470509,321.23527804879,249.429290153991,510.609246443861,1485.1965883146,1443.03882230023,591.119832802728,719.911538294323,558.023474957554,583.074696585732,1433.82016461727,1420.08204598793,1839.09793096378,258.74067144339,301.144758681661,225.038282822274,570.766725060587,377.232727628743,393.19942282158,361.282169404636,263.045937862572,281.367497987143,282.791043088124,303.080252104135,295.459924351258,396.814082920995,374.988898345748,366.080816117093,212.486607788659,110.671141270365,83.3597893117551,296.841098152383,1922.07422732397,3469.23749333488,1666.2718876091,119.832511523858,227.377799600857,364.774584183645,121.155551174017,100.75189018815,169.347256316041,158.996437806402,597.695226437506,394.618910775215,508.478189968554,193.816949271443,475.850459914607,675.452382825543,454.836939888312,436.591857270066,288.610829399933,227.786194666463,312.401549682136,192.216604459089,535.255326452247,365.352946884227,398.529296231344,595.554805005721,393.436857654221,405.713773998324,445.31254318679,718.911771748397,1770.27944521666,1860.62536843939,1159.67124103341,415.494299706217,378.994112929451,487.96818655935,353.459890228719,418.714285158475,397.546349910774,352.753994186369,503.280901025686,344.574525325517,378.652214650919,285.979722425784,208.427909342395,275.440776309326,271.58349261503,264.118232120412,123.860779704271,246.147832811248,119.281180657151,311.787218096319,522.769502061858,508.830548046221,404.514961090051,395.098024737128,442.532307251292,342.215901376494,337.864691819692,442.381392388693,344.329236056369,266.800629007183,276.654039622031,213.020199851051,288.544296582717,291.741965317648,614.523999087985,516.060531458145,336.99612966251,404.451537100794,496.71231963629,418.710844745202,199.764220775529,138.901149248806,157.783721480582,237.539540549466,230.936596500889,464.496774313606,380.341655544048,426.113702969298,408.154564233668,430.501230158064,587.676465911517,497.714317789902,418.146749852816,391.799136619392,94.887016308054,216.2138905954,250.878289184107,216.460098400675,199.84871866341,219.029358698969,319.623018988226,661.514518490762,383.293624591645,575.945076035213,564.664737382136,432.501156714768,483.228590998608,488.809787883786,238.974878464986,244.275552682599,251.619624941515,288.72716052913,226.735381189921,296.385921033517,1253.07556953535,1230.31465679792,359.971447849935,442.878477819096,124.587257830527,141.943352463158,961.478454634201,296.905810392343,826.631534870593,804.303813251075,541.574421900257,662.899445520379,638.540999920142,749.303576998039,808.002160543089,741.453111520998,632.855732492384,161.624622160169,309.429385754026,838.15479646177,581.832218810974,331.095036805879,633.194309881623,705.277748030221,775.157600057622,711.229755759492,758.630562810705,587.201132572901,340.350062102547,496.587074466273,483.053947711297,483.220202883863,590.344208019993,649.753922463577,325.119823494868,532.440655050584,716.517749472677,617.933671996081,389.616493312075,667.991221919754,443.130512481512,747.156985127227,283.014079924835,334.271007823108,551.98258033157,430.188233924321,376.857971908244,287.14983558295,412.908937906849,261.148171494392,263.498676313385,116.4470896626,556.868200520202,701.30257733903,462.801123896909,498.799674148422,314.533417986079,531.451696358752,994.373815464054,924.659245502408,870.107035072652,363.729505463758,456.631006734369,403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| ||
|short_description=p1@Rplp2 | |||
}} | }} |
Latest revision as of 04:00, 26 September 2015
Short description: | p1@Rplp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rplp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | 0bp_to_NM_026020, uc009klf.1_5end |
EntrezGene: | Rplp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.95e-27 | 97 |
somatic stem cell | 1.89e-24 | 91 |
multi fate stem cell | 1.89e-24 | 91 |
motile cell | 1.45e-22 | 54 |
connective tissue cell | 3.11e-20 | 46 |
mesenchymal cell | 3.11e-20 | 46 |
hematopoietic cell | 4.92e-18 | 32 |
hematopoietic oligopotent progenitor cell | 4.92e-18 | 32 |
hematopoietic stem cell | 4.92e-18 | 32 |
hematopoietic multipotent progenitor cell | 4.92e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 2.13e-14 | 25 |
common myeloid progenitor | 7.63e-11 | 19 |
leukocyte | 4.49e-10 | 17 |
nongranular leukocyte | 4.49e-10 | 17 |
embryonic cell | 4.43e-09 | 70 |
myeloid cell | 6.14e-09 | 16 |
lymphoid lineage restricted progenitor cell | 1.80e-08 | 12 |
lymphocyte | 2.81e-08 | 13 |
common lymphoid progenitor | 2.81e-08 | 13 |
T cell | 7.21e-08 | 11 |
pro-T cell | 7.21e-08 | 11 |
myeloid lineage restricted progenitor cell | 2.81e-07 | 13 |
mature alpha-beta T cell | 4.12e-07 | 9 |
alpha-beta T cell | 4.12e-07 | 9 |
immature T cell | 4.12e-07 | 9 |
mature T cell | 4.12e-07 | 9 |
immature alpha-beta T cell | 4.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.11e-20 | 46 |
hematopoietic system | 2.00e-09 | 45 |
blood island | 2.00e-09 | 45 |
bone marrow | 2.23e-09 | 16 |
hemolymphoid system | 2.31e-09 | 48 |
immune system | 2.31e-09 | 48 |
bone element | 8.44e-07 | 22 |
skeletal element | 8.44e-07 | 22 |
skeletal system | 8.44e-07 | 22 |