FFCP PHASE1:Mm9::chr19:8831589..8831616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53319 | |EntrezGene=53319 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=Q99JX7 | |UniProt=Q99JX7 | ||
|association_with_transcript=0bp_to_ENSMUST00000010241,NM_016813,uc008gmr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000010241,NM_016813,uc008gmr.1_5end | ||
|cluster_id=chr19:8831589..8831616,+ | |||
|description=CAGE_peak_2_at_Nxf1_5end | |description=CAGE_peak_2_at_Nxf1_5end | ||
|id=chr19:8831589..8831616,+ | |id=chr19:8831589..8831616,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.50e-08!13;CL:0000051!1.50e-08!13;CL:0000838!4.46e-08!12;CL:0000791!1.64e-07!9;CL:0000789!1.64e-07!9;CL:0002420!1.64e-07!9;CL:0002419!1.64e-07!9;CL:0000790!1.64e-07!9;CL:0000084!1.91e-07!11;CL:0000827!1.91e-07!11;CL:0000624!7.24e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.50e-08,13;CL:0000051,1.50e-08,13;CL:0000838,4.46e-08,12;CL:0000791,1.64e-07,9;CL:0000789,1.64e-07,9;CL:0002420,1.64e-07,9;CL:0002419,1.64e-07,9;CL:0000790,1.64e-07,9;CL:0000084,1.91e-07,11;CL:0000827,1.91e-07,11;CL:0000624,7.24e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!2.17e-08!41;UBERON:0004177!5.83e-08!29;UBERON:0001004!6.95e-08!42;UBERON:0003081!1.21e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.73e-09,43;UBERON:0001048,6.31e-09,134;UBERON:0000065,2.17e-08,41;UBERON:0004177,5.83e-08,29;UBERON:0005057,5.83e-08,29;UBERON:0001004,6.95e-08,42;UBERON:0000077,1.84e-07,35;UBERON:0003081,3.15e-07,87;UBERON:0007811,3.36e-07,36;UBERON:0000926,6.24e-07,120;UBERON:0004120,6.24e-07,120;UBERON:0006603,6.24e-07,120 | |||
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|phase1_expression=33.7914067391115,18.8446720125255,12.2849794635175,19.3577095236371,26.0465779572101,18.9703577260435,23.5948767001481,93.8726561420259,166.975424471877,218.850332111064,84.0680223987229,78.256487974425,96.0436094914064,117.580441253551,29.646768801594,54.8707974626428,54.5658264939954,61.1996600794981,63.483982759457,50.5023685639656,41.6712121740242,34.3546691155063,40.7471671056739,21.2789922315231,17.6645146421721,7.46501553349526,9.47676391549965,17.0222273821852,14.0617330397717,12.3494763582366,12.4169085966971,43.1820857952549,45.5147942812582,15.8481681015439,20.7973166220918,24.1040235769814,25.5211695327961,30.5528090437943,20.3147189576188,30.8879008944541,41.176204162171,29.3709558532132,29.1306211818692,41.7977435678917,39.5370031756107,32.1206816282943,7.04152209913235,10.9012578190223,5.71184075109627,10.6936444490856,12.738764367908,4.31257693094915,72.9854336351153,66.0079549230323,76.6293862044818,17.7509010864803,20.3438742356517,18.0485232297105,37.4285452590256,35.4423956112262,32.3254015788151,6.77689064138264,10.6715375533337,21.1476433561129,19.7773272513395,17.0515227587064,11.085204089181,9.60545763303886,34.8397097356485,42.2568586978192,37.2275181591946,16.5677570954206,20.3199057675484,34.2974237801871,48.3061173931911,29.4150011715207,17.6185409599022,25.2820929408672,25.6522910537927,34.4223210975806,38.9737361746265,39.5894161623138,23.451371916116,26.449842671489,28.1148775909331,19.4454866412621,18.7930618654816,27.4007185363192,29.0031320466095,29.0194790810056,57.1033042742305,25.8127163094416,16.319312008986,12.4131734076698,15.5946340187441,16.5769948226014,23.4542181620026,34.9382161285018,27.5373164879041,26.5004680882755,27.323623436676,19.2489716121477,28.028576367731,0,14.9378818297738,21.2822286999083,13.6491600153991,20.895649988588,80.2707439306232,39.6340511303082,27.0637109755172,22.5304453950985,25.5983201954225,29.9938054699719,28.5740558339763,20.8606541607261,28.9218112249217,32.3902559500602,30.9613693182456,34.779872738693,29.1510804367719,37.8202697445473,22.3670113461747,43.0387771606974,37.4909605196085,20.4365644166873,37.0228734723294,20.9965955847693,32.1487674494854,40.4434726393021,38.4300506367646,38.3245773944236,30.5930803538407,29.6629930503183,32.4149349512914,30.3391161936707,27.4966282395854,35.9536145063169,22.9977710174644,26.3052319858092,45.0216732650955,35.8647282916218,41.5943519850357,44.1565116258645,39.6652790052241,49.0675548690975,38.7925139677277,39.0642089815914,41.1734866501729,49.9240051643043,49.0903636417417,38.7976446396807,50.6045993590588,38.3077383174383,42.8026843728522,32.8406540250514,34.4084461783485,35.5140111818307,30.689657934724,33.9686266958223,36.1170132370888,39.4335914599623,41.1935839918266,37.1884398002593,39.1838466733941,39.7633045523197,34.6072687805509,35.6134294219867,33.899329082177,38.5793540585874,34.0489000092594,29.9709974221931,31.8347667172023,30.0622378023233,38.9036404843635,35.7079004956117,23.7901523748335,21.1560453330835,49.4828741241743,40.1769442318559,37.6292987060513,29.6474781196314,22.0154263406422,28.914295169109,20.404749646414,19.2697777027093,20.1068167040216,21.4872989804443,26.5151158482003,17.0775687644302,30.2593269824572,23.6978115172697,38.1232480915694,33.2463171694311,32.6852433451933,33.6024690944769,31.2263504339877,28.7556861550306,30.1005916711465,34.3931644792473,31.2427468404336,26.4069930792653,25.4949259294948,39.5422900547143,37.5427680666218,44.0729740274313,34.0805003932685,40.517762838406,31.0643539173332,27.6188291952778,26.1037715107807,36.7912293672029,18.6898668485561,30.5155577088173,31.2037673114561,22.7320990152401,19.1955232468446,19.7801843758981,49.3291017744834,36.0033682363921,48.2376330268397,36.1557032701151,42.0095544436419,41.7090581030121,34.992415210244,34.5386556708304,51.2314218345121,43.8500085504574,48.1553401345611,54.5664838003408,44.2073553576693,45.5644534531761,31.6661696272472,20.668415985111,26.0635064700089,30.0771053472158,33.5550733074485,31.5299436933027,19.0164536636943,28.2767438468898,29.6577726251281,27.7211508450613,38.3453647964382,32.7387253194996,35.8705865272655,29.7230357328274,33.5992882390162,30.1023533648651,41.1099289064384,51.4114106274891,40.7368044547731,35.4350551297838,24.59593086239,44.7069033255571,19.9117707509944,27.1914312493579,22.0696196584268,21.3123740124165,22.4429438589387,30.1286444985049,29.4608254211772,25.8108947929029,24.9548164869305,27.8112346983518,13.7044191147498,13.4076206222643,54.1298973148523,40.1536239689822,36.867224878085,27.863814554107,40.2562330367961,28.1822731811271,36.0362355118645,26.7929155220847,26.752574719263,31.1393144169816,22.0528398054962,33.1421368412375,36.3294960065787,38.1780814795227,32.4692775688531,39.7220977383048,27.399198643206,28.740921811629,39.9837861066975,24.9728110235499,41.6687686581851,52.3664310473041,50.9869469399424,45.526856468098,43.3444996484331,48.0033481470147,43.6711917221979,36.2774834845743,37.327647242574,40.0539350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| ||
|short_description=p2@Nxf1 | |short_description=p2@Nxf1 | ||
}} | }} |
Latest revision as of 04:31, 26 September 2015
Short description: | p2@Nxf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nxf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000010241, NM_016813, uc008gmr.1_5end |
EntrezGene: | Nxf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.50e-08 | 13 |
common lymphoid progenitor | 1.50e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.46e-08 | 12 |
mature alpha-beta T cell | 1.64e-07 | 9 |
alpha-beta T cell | 1.64e-07 | 9 |
immature T cell | 1.64e-07 | 9 |
mature T cell | 1.64e-07 | 9 |
immature alpha-beta T cell | 1.64e-07 | 9 |
T cell | 1.91e-07 | 11 |
pro-T cell | 1.91e-07 | 11 |
CD4-positive, alpha-beta T cell | 7.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.73e-09 | 43 |
primordium | 6.31e-09 | 134 |
respiratory tract | 2.17e-08 | 41 |
hemopoietic organ | 5.83e-08 | 29 |
immune organ | 5.83e-08 | 29 |
respiratory system | 6.95e-08 | 42 |
mixed endoderm/mesoderm-derived structure | 1.84e-07 | 35 |
lateral plate mesoderm | 3.15e-07 | 87 |
craniocervical region | 3.36e-07 | 36 |
mesoderm | 6.24e-07 | 120 |
mesoderm-derived structure | 6.24e-07 | 120 |
presumptive mesoderm | 6.24e-07 | 120 |