FFCP PHASE1:Mm9::chr9:108998082..108998114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235611 | |EntrezGene=235611 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1133 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CJH3,B2RWT9 | |UniProt=Q8CJH3,B2RWT9 | ||
|association_with_transcript=132bp_to_ENSMUST00000072093,NM_172775,uc009rrz.2_5end | |association_with_transcript=132bp_to_ENSMUST00000072093,NM_172775,uc009rrz.2_5end | ||
|cluster_id=chr9:108998082..108998114,+ | |||
|description=CAGE_peak_1_at_Plxnb1_5end | |description=CAGE_peak_1_at_Plxnb1_5end | ||
|id=chr9:108998082..108998114,+ | |id=chr9:108998082..108998114,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.97e-20!44;CL:0000133!2.97e-20!44;CL:0002319!7.91e-20!43;CL:0000540!1.23e-15!33;CL:0000047!1.23e-15!33;CL:0000031!1.23e-15!33;CL:0000404!1.23e-15!33;CL:0000055!3.65e-15!50;CL:0000117!1.46e-12!23;CL:0000337!1.46e-12!23;CL:0000393!1.30e-11!39;CL:0000211!1.30e-11!39 | |ontology_enrichment_celltype=CL:0000221!2.97e-20!44;CL:0000133!2.97e-20!44;CL:0002319!7.91e-20!43;CL:0000540!1.23e-15!33;CL:0000047!1.23e-15!33;CL:0000031!1.23e-15!33;CL:0000404!1.23e-15!33;CL:0000055!3.65e-15!50;CL:0000117!1.46e-12!23;CL:0000337!1.46e-12!23;CL:0000393!1.30e-11!39;CL:0000211!1.30e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.51e-20,44;CL:0000133,1.51e-20,44;CL:0002319,4.08e-20,43;CL:0000540,7.36e-16,33;CL:0000047,7.36e-16,33;CL:0000031,7.36e-16,33;CL:0000404,7.36e-16,33;CL:0000117,9.81e-13,23;CL:0000337,9.81e-13,23;CL:0000393,1.34e-11,39;CL:0000211,1.34e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.16e-40!102;UBERON:0000924!8.16e-40!102;UBERON:0006601!8.16e-40!102;UBERON:0000073!2.03e-36!75;UBERON:0001016!2.03e-36!75;UBERON:0001017!2.39e-36!73;UBERON:0005743!2.39e-36!73;UBERON:0002346!8.19e-29!71;UBERON:0003075!8.19e-29!71;UBERON:0007284!8.19e-29!71;UBERON:0000033!3.74e-25!63;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0000955!2.14e-23!50;UBERON:0006238!2.14e-23!50;UBERON:0002616!8.14e-23!49;UBERON:0003056!9.33e-20!49;UBERON:0003080!3.99e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002020!1.29e-16!34;UBERON:0002791!8.15e-14!29;UBERON:0003528!8.15e-14!29;UBERON:0001893!8.15e-14!29;UBERON:0000468!1.17e-10!333;UBERON:0007811!3.47e-10!86;UBERON:0000153!5.94e-10!94;UBERON:0000956!1.09e-09!21;UBERON:0001869!1.09e-09!21;UBERON:0000203!1.09e-09!21;UBERON:0004111!8.05e-09!122;UBERON:0000025!1.02e-08!114;UBERON:0002619!2.33e-08!17;UBERON:0000922!3.64e-08!328;UBERON:0000479!6.16e-07!349;UBERON:0003076!6.73e-07!12;UBERON:0003057!6.73e-07!12 | |ontology_enrichment_uberon=UBERON:0004121!8.16e-40!102;UBERON:0000924!8.16e-40!102;UBERON:0006601!8.16e-40!102;UBERON:0000073!2.03e-36!75;UBERON:0001016!2.03e-36!75;UBERON:0001017!2.39e-36!73;UBERON:0005743!2.39e-36!73;UBERON:0002346!8.19e-29!71;UBERON:0003075!8.19e-29!71;UBERON:0007284!8.19e-29!71;UBERON:0000033!3.74e-25!63;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0000955!2.14e-23!50;UBERON:0006238!2.14e-23!50;UBERON:0002616!8.14e-23!49;UBERON:0003056!9.33e-20!49;UBERON:0003080!3.99e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002020!1.29e-16!34;UBERON:0002791!8.15e-14!29;UBERON:0003528!8.15e-14!29;UBERON:0001893!8.15e-14!29;UBERON:0000468!1.17e-10!333;UBERON:0007811!3.47e-10!86;UBERON:0000153!5.94e-10!94;UBERON:0000956!1.09e-09!21;UBERON:0001869!1.09e-09!21;UBERON:0000203!1.09e-09!21;UBERON:0004111!8.05e-09!122;UBERON:0000025!1.02e-08!114;UBERON:0002619!2.33e-08!17;UBERON:0000922!3.64e-08!328;UBERON:0000479!6.16e-07!349;UBERON:0003076!6.73e-07!12;UBERON:0003057!6.73e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.62e-39,95;UBERON:0000924,6.62e-39,95;UBERON:0006601,6.62e-39,95;UBERON:0001016,5.70e-37,75;UBERON:0001017,6.73e-37,73;UBERON:0002346,2.96e-28,64;UBERON:0003075,2.96e-28,64;UBERON:0007284,2.96e-28,64;UBERON:0010371,3.43e-27,73;UBERON:0000073,2.82e-26,54;UBERON:0001049,8.68e-25,52;UBERON:0005068,8.68e-25,52;UBERON:0006241,8.68e-25,52;UBERON:0007135,8.68e-25,52;UBERON:0010314,7.22e-23,92;UBERON:0000955,1.46e-21,47;UBERON:0006238,1.46e-21,47;UBERON:0002616,5.53e-21,46;UBERON:0003056,4.82e-20,49;UBERON:0003080,2.19e-18,40;UBERON:0002780,1.07e-17,39;UBERON:0001890,1.07e-17,39;UBERON:0006240,1.07e-17,39;UBERON:0002020,7.45e-17,34;UBERON:0003528,5.23e-14,29;UBERON:0002791,5.23e-14,29;UBERON:0001893,5.23e-14,29;UBERON:0000956,8.13e-10,21;UBERON:0001869,8.13e-10,21;UBERON:0000203,8.13e-10,21;UBERON:0002619,1.82e-08,17;UBERON:0004111,2.10e-08,122;UBERON:0000025,2.72e-08,114;UBERON:0003076,5.54e-07,12;UBERON:0003057,5.54e-07,12 | |||
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0,0.671517087647559,1.86890112476421,0.258246646883153,0.281577444303333,1.40438715793196,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,3.74190476664707,0,0,0.95995453676044,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0,0,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,1.52065396829272,1.28482726513177,1.56478268869608,63.6633456630904,54.0428009526801,55.9958109333936,28.1372707466979,77.6263847570847,0,0,0,1.54355661621568,2.0057340795713,1.03134418455488,18.8154308599426,16.398720357433,15.8457850876545,3.38844532069132,9.78224275722253,0,0,0,44.3408163567239,79.5331892015618,7.77672092313582,9.72042755988173,9.25429829946081,23.9946826899195,18.5529574399355,11.8816075238505,9.68039257284187,11.9498442259303,36.3382407297983,28.2189017168265,30.8749131845049,15.5625819521629,12.4423195299277,18.2319679694866,24.8472869111229,18.0084035210138,26.4340968653881,18.8562294703147,22.3523538854592,12.8615617619457,2.49896437999507,11.5624486963382,4.63783181922684,1.72084775396277,0.679971333707751,0,0,0.448026887097336,1.96622188184453,0,0,0,11.1266301623578,0,0,0,0.865964164044856,2.78695852022608,2.52762222507392,2.05530983494308,0.776813650941515,19.8912466346865,2.4287945747259,6.39377504455497,3.45923245884088,4.52167921657868,5.64425794251383,9.55066094105534,6.67426412882809,2.60278842455841,0,3.558870698843,1.76673214768315,3.39412677194655,1.86391761218122,22.5441213698891,19.8974371472782,0.255457055208591,0,0,0,28.9095934051308,21.9600289352941,10.178002521142,17.3824320192276,18.4115129277838,25.1423533917068,24.3361894601636,2.13862664085664,2.36373244159177,0,2.10441855886474,5.07469727554544,6.20735681970377,7.20248519221397,7.53524089178575,10.1374383735478,11.0177799444971,11.5253121208466,5.69147415625834,3.88022387279116,5.67318240503458,3.69497360744293,2.6303487891309,2.78047249225598,3.83077383174383,2.46938563689532,1.99034266818493,0,0,0,3.31401236056803,1.87620847984877,2.16074473753218,3.55117103377815,1.37734962223183,1.54267112887378,2.32533944750408,1.3413670069981,2.21854150497622,1.81015834904829,1.64167464079095,2.26992666728396,3.21639972335731,1.97595103761946,3.75777972529041,23.5524742391823,13.0688857721691,0,0.528901133327089,2.55945900642281,3.25131340604614,2.57734922644187,2.62188582010345,1.11189021922435,2.66315876557583,0.474529061544512,0.658795818896044,1.25667604400135,1.98956472041151,2.14460495831032,0.898819408654221,1.29682829924817,1.39398891278057,1.89667900953082,3.08470984046268,3.38123207019241,3.05476991767971,3.68509725618489,5.61086559122549,6.5133633237985,3.69025369949005,4.23896565171712,2.71473760627961,0.592905254174298,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,1.20588579876208,1.78238096246994,0.863088412352432,0.162135226775035,1.09824565275233,1.43768206527355,2.60498663367952,2.80833905803104,2.52578877947112,2.15276896226295,1.4473305640901,6.46636165583116,3.22135400009824,2.77040459951444,3.73439188705414,3.05097322775053,3.68513766371995,3.33261097240419,6.63454402716516,5.51723004371669,2.87904096543407,5.10255259703959,7.04612253277673,4.66249451037918,5.93061140184197,0,0,1.47529281905711,1.65562047782839,24.5642402681322,27.0758996027989,0.163934945376675,2.27223834483936,11.042787679569,10.5418460960092,24.5582673415391,6.4521575447189,9.13474563737816,13.0215204162863,9.31064613852257,13.151513606009,11.4633455604492,17.9939937196212,12.2068473279111,3.02711526234334,3.90928702448583,11.5479086080775,2.65490276679926,3.8844901784797,3.32555912661226,3.39489143560617,5.61073596473468,3.3817866273832,3.35956781118687,3.27180356529755,2.49548164869305,2.84433082142234,2.10837217149998,8.25084345985495,14.6389030474129,8.10274923140896,6.98536892426874,8.14480733120051,8.15765074754458,9.63191615051181,7.0756078858912,7.91608867697958,5.16277757740163,9.32061111800809,1.7642271844397,7.09010887648364,2.26050197374268,3.43783672090488,4.77489376012546,6.07321329056727,1.7488850197791,34.1182555699338,0.854354403989263,3.50857675537478,0.740778109478847,0.941842285023455,0.956859594047176,0.228778173206523,0,0,0.138199973804424,3.81868247206045,4.11236791655476,6.91286188231286,5.29226170026826,6.27264888043406,4.58561383866973,6.47348862647139,5.53778153359751,4.71160695571253,1.16653475962614,1.24267862617385,0,5.23307911153926,3.14371131868485,6.22243802700952,3.35815541042101,3.54807863530634,2.46450201156083,2.73429208172295,1.78260885523708,0.966336483304024,0.576060012515731,0.948033361884535,1.01362607645082,1.33524244314275,0.389762468933385,1.07416017400489,1.98681354781265,1.08175904567972,0.738447635872886,1.11063094942962,0.533447646584999,0.100826185136841,0.0974578807397524,0.192423683280659,0.701261413089414,14.7374749349887,0,0,0.167884616364078,2.89784391048286,0.750729901804728,2.19781949120718,3.85863082342319,1.50471631210609,11.8597886949584,8.28585425712918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| ||
|short_description=p1@Plxnb1 | |short_description=p1@Plxnb1 | ||
}} | }} |
Latest revision as of 04:54, 26 September 2015
Short description: | p1@Plxnb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plxnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1133 |
Association with transcript: | 132bp_to_ENSMUST00000072093, NM_172775, uc009rrz.2_5end |
EntrezGene: | Plxnb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.51e-20 | 44 |
neurectodermal cell | 1.51e-20 | 44 |
neural cell | 4.08e-20 | 43 |
neuron | 7.36e-16 | 33 |
neuronal stem cell | 7.36e-16 | 33 |
neuroblast | 7.36e-16 | 33 |
electrically signaling cell | 7.36e-16 | 33 |
CNS neuron (sensu Vertebrata) | 9.81e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.81e-13 | 23 |
electrically responsive cell | 1.34e-11 | 39 |
electrically active cell | 1.34e-11 | 39 |