FFCP PHASE1:Mm9::chr4:119165152..119165166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=194237 | |EntrezGene=194237 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=464 | |MCL_coexpression_id=464 | ||
|TSSclassifier=NA | |||
|UniProt=Q6PFX8 | |UniProt=Q6PFX8 | ||
|association_with_transcript=36bp_to_NM_177572,uc008umo.2_5end | |association_with_transcript=36bp_to_NM_177572,uc008umo.2_5end | ||
|cluster_id=chr4:119165152..119165166,- | |||
|description=CAGE_peak_2_at_Rimkla_5end | |description=CAGE_peak_2_at_Rimkla_5end | ||
|id=chr4:119165152..119165166,- | |id=chr4:119165152..119165166,- | ||
|ontology_enrichment_celltype=CL:0000117!7.43e-17!23;CL:0000337!7.43e-17!23;CL:0000540!4.68e-16!33;CL:0000047!4.68e-16!33;CL:0000031!4.68e-16!33;CL:0000404!4.68e-16!33;CL:0000393!6.16e-12!39;CL:0000211!6.16e-12!39;CL:0000221!6.12e-10!44;CL:0000133!6.12e-10!44;CL:0002319!1.58e-09!43;CL:0000055!7.72e-07!50 | |ontology_enrichment_celltype=CL:0000117!7.43e-17!23;CL:0000337!7.43e-17!23;CL:0000540!4.68e-16!33;CL:0000047!4.68e-16!33;CL:0000031!4.68e-16!33;CL:0000404!4.68e-16!33;CL:0000393!6.16e-12!39;CL:0000211!6.16e-12!39;CL:0000221!6.12e-10!44;CL:0000133!6.12e-10!44;CL:0002319!1.58e-09!43;CL:0000055!7.72e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.27e-34,23;CL:0000337,2.27e-34,23;CL:0000540,7.98e-22,33;CL:0000047,7.98e-22,33;CL:0000031,7.98e-22,33;CL:0000404,7.98e-22,33;CL:0000393,2.05e-17,39;CL:0000211,2.05e-17,39;CL:0000221,5.39e-16,44;CL:0000133,5.39e-16,44;CL:0002319,3.61e-15,43;CL:0002609,4.64e-09,6;CL:0002321,1.28e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.51e-24!73;UBERON:0005743!1.51e-24!73;UBERON:0002346!1.71e-24!71;UBERON:0003075!1.71e-24!71;UBERON:0007284!1.71e-24!71;UBERON:0000073!7.22e-24!75;UBERON:0001016!7.22e-24!75;UBERON:0000033!2.02e-22!63;UBERON:0001049!3.72e-22!52;UBERON:0005068!3.72e-22!52;UBERON:0006241!3.72e-22!52;UBERON:0007135!3.72e-22!52;UBERON:0004121!4.19e-22!102;UBERON:0000924!4.19e-22!102;UBERON:0006601!4.19e-22!102;UBERON:0000955!3.29e-20!50;UBERON:0006238!3.29e-20!50;UBERON:0002616!9.41e-20!49;UBERON:0003056!2.73e-19!49;UBERON:0002020!1.16e-16!34;UBERON:0003080!1.77e-16!40;UBERON:0002780!9.32e-16!39;UBERON:0001890!9.32e-16!39;UBERON:0006240!9.32e-16!39;UBERON:0002791!6.50e-13!29;UBERON:0003528!6.50e-13!29;UBERON:0001893!6.50e-13!29;UBERON:0007811!2.68e-12!86;UBERON:0000153!3.48e-10!94;UBERON:0000956!4.66e-08!21;UBERON:0001869!4.66e-08!21;UBERON:0000203!4.66e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!1.51e-24!73;UBERON:0005743!1.51e-24!73;UBERON:0002346!1.71e-24!71;UBERON:0003075!1.71e-24!71;UBERON:0007284!1.71e-24!71;UBERON:0000073!7.22e-24!75;UBERON:0001016!7.22e-24!75;UBERON:0000033!2.02e-22!63;UBERON:0001049!3.72e-22!52;UBERON:0005068!3.72e-22!52;UBERON:0006241!3.72e-22!52;UBERON:0007135!3.72e-22!52;UBERON:0004121!4.19e-22!102;UBERON:0000924!4.19e-22!102;UBERON:0006601!4.19e-22!102;UBERON:0000955!3.29e-20!50;UBERON:0006238!3.29e-20!50;UBERON:0002616!9.41e-20!49;UBERON:0003056!2.73e-19!49;UBERON:0002020!1.16e-16!34;UBERON:0003080!1.77e-16!40;UBERON:0002780!9.32e-16!39;UBERON:0001890!9.32e-16!39;UBERON:0006240!9.32e-16!39;UBERON:0002791!6.50e-13!29;UBERON:0003528!6.50e-13!29;UBERON:0001893!6.50e-13!29;UBERON:0007811!2.68e-12!86;UBERON:0000153!3.48e-10!94;UBERON:0000956!4.66e-08!21;UBERON:0001869!4.66e-08!21;UBERON:0000203!4.66e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.20e-38,54;UBERON:0001049,5.11e-35,52;UBERON:0005068,5.11e-35,52;UBERON:0006241,5.11e-35,52;UBERON:0007135,5.11e-35,52;UBERON:0001017,9.70e-33,73;UBERON:0002346,6.60e-32,64;UBERON:0003075,6.60e-32,64;UBERON:0007284,6.60e-32,64;UBERON:0001016,1.49e-31,75;UBERON:0010371,4.55e-28,73;UBERON:0004121,4.75e-28,95;UBERON:0000924,4.75e-28,95;UBERON:0006601,4.75e-28,95;UBERON:0002616,7.28e-26,46;UBERON:0000955,4.00e-25,47;UBERON:0006238,4.00e-25,47;UBERON:0002020,2.93e-24,34;UBERON:0003080,3.15e-22,40;UBERON:0003056,1.40e-21,49;UBERON:0010314,3.10e-21,92;UBERON:0002780,7.13e-21,39;UBERON:0001890,7.13e-21,39;UBERON:0006240,7.13e-21,39;UBERON:0003528,4.88e-17,29;UBERON:0002791,4.88e-17,29;UBERON:0001893,4.88e-17,29;UBERON:0003076,1.67e-13,12;UBERON:0003057,1.67e-13,12;UBERON:0002420,4.65e-12,8;UBERON:0007245,4.65e-12,8;UBERON:0010009,4.65e-12,8;UBERON:0010011,4.65e-12,8;UBERON:0000454,4.65e-12,8;UBERON:0002240,2.83e-11,6;UBERON:0005174,2.83e-11,6;UBERON:0001137,2.83e-11,6;UBERON:0000025,2.87e-11,114;UBERON:0004111,1.34e-10,122;UBERON:0001948,1.49e-09,5;UBERON:0002315,1.49e-09,5;UBERON:0000956,3.87e-08,21;UBERON:0001869,3.87e-08,21;UBERON:0000203,3.87e-08,21;UBERON:0000369,9.27e-08,5;UBERON:0002435,9.27e-08,5;UBERON:0000204,9.27e-08,5;UBERON:0010082,9.27e-08,5;UBERON:0002950,2.09e-07,4;UBERON:0001891,2.09e-07,4;UBERON:0009616,2.09e-07,4;UBERON:0010286,2.09e-07,4 | |||
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| ||
|short_description=p2@Rimkla | |short_description=p2@Rimkla | ||
}} | }} |
Latest revision as of 06:32, 26 September 2015
Short description: | p2@Rimkla |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rimkla_5end |
Coexpression cluster: | MCL_coexpression_mm9:464 |
Association with transcript: | 36bp_to_NM_177572, uc008umo.2_5end |
EntrezGene: | Rimkla |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.27e-34 | 23 |
neuroblast (sensu Vertebrata) | 2.27e-34 | 23 |
neuron | 7.98e-22 | 33 |
neuronal stem cell | 7.98e-22 | 33 |
neuroblast | 7.98e-22 | 33 |
electrically signaling cell | 7.98e-22 | 33 |
electrically responsive cell | 2.05e-17 | 39 |
electrically active cell | 2.05e-17 | 39 |
ectodermal cell | 5.39e-16 | 44 |
neurectodermal cell | 5.39e-16 | 44 |
neural cell | 3.61e-15 | 43 |
neuron of cerebral cortex | 4.64e-09 | 6 |
embryonic cell | 1.28e-07 | 70 |