FFCP PHASE1:Mm9::chr7:19735159..19735193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107686 | |EntrezGene=107686 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=268 | |||
|TSSclassifier=NA | |||
|UniProt=P62317,Q14AF6,D3Z5N9 | |UniProt=P62317,Q14AF6,D3Z5N9 | ||
|association_with_transcript=0bp_to_NM_026943,uc009fkv.1_5end | |association_with_transcript=0bp_to_NM_026943,uc009fkv.1_5end | ||
|cluster_id=chr7:19735159..19735193,+ | |||
|description=CAGE_peak_1_at_Snrpd2_5end | |description=CAGE_peak_1_at_Snrpd2_5end | ||
|id=chr7:19735159..19735193,+ | |id=chr7:19735159..19735193,+ | ||
|ontology_enrichment_celltype=CL:0000034!1.98e-24!97;CL:0000144!2.41e-24!121;CL:0000012!2.41e-24!121;CL:0002371!3.64e-23!118;CL:0000548!1.22e-22!115;CL:0000004!1.22e-22!115;CL:0000255!1.22e-22!115;CL:0000723!1.01e-21!91;CL:0000048!1.01e-21!91;CL:0000221!6.54e-14!44;CL:0000133!6.54e-14!44;CL:0002319!1.67e-13!43;CL:0000219!2.85e-13!54;CL:0000055!3.35e-12!50;CL:0002320!2.76e-10!46;CL:0000134!2.76e-10!46;CL:0000988!3.21e-10!32;CL:0002032!3.21e-10!32;CL:0000037!3.21e-10!32;CL:0000566!3.21e-10!32;CL:0000837!3.21e-10!32;CL:0000540!5.08e-10!33;CL:0000047!5.08e-10!33;CL:0000031!5.08e-10!33;CL:0000404!5.08e-10!33;CL:0000393!6.48e-09!39;CL:0000211!6.48e-09!39;CL:0000117!7.32e-09!23;CL:0000337!7.32e-09!23;CL:0000063!1.05e-08!66;CL:0002321!2.18e-08!70;CL:0000220!2.18e-08!70;CL:0000049!5.85e-08!19 | |ontology_enrichment_celltype=CL:0000034!1.98e-24!97;CL:0000144!2.41e-24!121;CL:0000012!2.41e-24!121;CL:0002371!3.64e-23!118;CL:0000548!1.22e-22!115;CL:0000004!1.22e-22!115;CL:0000255!1.22e-22!115;CL:0000723!1.01e-21!91;CL:0000048!1.01e-21!91;CL:0000221!6.54e-14!44;CL:0000133!6.54e-14!44;CL:0002319!1.67e-13!43;CL:0000219!2.85e-13!54;CL:0000055!3.35e-12!50;CL:0002320!2.76e-10!46;CL:0000134!2.76e-10!46;CL:0000988!3.21e-10!32;CL:0002032!3.21e-10!32;CL:0000037!3.21e-10!32;CL:0000566!3.21e-10!32;CL:0000837!3.21e-10!32;CL:0000540!5.08e-10!33;CL:0000047!5.08e-10!33;CL:0000031!5.08e-10!33;CL:0000404!5.08e-10!33;CL:0000393!6.48e-09!39;CL:0000211!6.48e-09!39;CL:0000117!7.32e-09!23;CL:0000337!7.32e-09!23;CL:0000063!1.05e-08!66;CL:0002321!2.18e-08!70;CL:0000220!2.18e-08!70;CL:0000049!5.85e-08!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.98e-24,97;CL:0000723,1.01e-21,91;CL:0000048,1.01e-21,91;CL:0000221,6.54e-14,44;CL:0000133,6.54e-14,44;CL:0002319,1.67e-13,43;CL:0000219,2.85e-13,54;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0000988,3.21e-10,32;CL:0002032,3.21e-10,32;CL:0000037,3.21e-10,32;CL:0000837,3.21e-10,32;CL:0000540,5.08e-10,33;CL:0000047,5.08e-10,33;CL:0000031,5.08e-10,33;CL:0000404,5.08e-10,33;CL:0000393,6.48e-09,39;CL:0000211,6.48e-09,39;CL:0000117,7.32e-09,23;CL:0000337,7.32e-09,23;CL:0002321,2.18e-08,70;CL:0000049,5.85e-08,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.76e-10!46;UBERON:0000073!2.65e-07!75;UBERON:0001016!2.65e-07!75;UBERON:0001017!4.26e-07!73;UBERON:0005743!4.26e-07!73 | |ontology_enrichment_uberon=UBERON:0002384!2.76e-10!46;UBERON:0000073!2.65e-07!75;UBERON:0001016!2.65e-07!75;UBERON:0001017!4.26e-07!73;UBERON:0005743!4.26e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.76e-10,46;UBERON:0001016,2.65e-07,75;UBERON:0001017,4.26e-07,73 | |||
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| ||
|short_description=p1@Snrpd2 | |short_description=p1@Snrpd2 | ||
}} | }} |
Latest revision as of 08:06, 26 September 2015
Short description: | p1@Snrpd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snrpd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:268 |
Association with transcript: | 0bp_to_NM_026943, uc009fkv.1_5end |
EntrezGene: | Snrpd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.98e-24 | 97 |
somatic stem cell | 1.01e-21 | 91 |
multi fate stem cell | 1.01e-21 | 91 |
ectodermal cell | 6.54e-14 | 44 |
neurectodermal cell | 6.54e-14 | 44 |
neural cell | 1.67e-13 | 43 |
motile cell | 2.85e-13 | 54 |
connective tissue cell | 2.76e-10 | 46 |
mesenchymal cell | 2.76e-10 | 46 |
hematopoietic cell | 3.21e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.21e-10 | 32 |
hematopoietic stem cell | 3.21e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.21e-10 | 32 |
neuron | 5.08e-10 | 33 |
neuronal stem cell | 5.08e-10 | 33 |
neuroblast | 5.08e-10 | 33 |
electrically signaling cell | 5.08e-10 | 33 |
electrically responsive cell | 6.48e-09 | 39 |
electrically active cell | 6.48e-09 | 39 |
CNS neuron (sensu Vertebrata) | 7.32e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.32e-09 | 23 |
embryonic cell | 2.18e-08 | 70 |
common myeloid progenitor | 5.85e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.76e-10 | 46 |
nervous system | 2.65e-07 | 75 |
central nervous system | 4.26e-07 | 73 |