FFCP PHASE1:Mm9::chr17:34701278..34701288,+: Difference between revisions
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{{FFCP|EntrezGene=18132|HGNC=|MCL_coexpression_id=94|UniProt=G3UX69|association_with_transcript=0bp_to_ENSMUST00000173389_5end|description=CAGE_peak_3_at_Notch4_5end|id=chr17:34701278..34701288,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.58e-10!18;UBERON:0000948!7.58e-10!18;UBERON:0005498!7.58e-10!18;UBERON:0004140!7.58e-10!18;UBERON:0009881!7.58e-10!18;UBERON:0004141!7.58e-10!18;UBERON:0003084!7.58e-10!18;UBERON:0007005!7.58e-10!18;UBERON:0004139!7.58e-10!18;UBERON:0004291!7.58e-10!18;UBERON:0002048!1.56e-08!14;UBERON:0000117!1.56e-08!14;UBERON:0000171!1.56e-08!14;UBERON:0000170!1.56e-08!14;UBERON:0005597!1.56e-08!14;UBERON:0000118!1.56e-08!14;UBERON:0004535!5.80e-08!23;UBERON:0001009!5.80e-08!23;UBERON:0005153!7.82e-08!17;UBERON:0005157!1.09e-07!27;UBERON:0000468!1.72e-07!333;UBERON:0005177!6.55e-07!85;UBERON:0004872!6.64e-07!33;UBERON:0000025!7.26e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.32e-14,18;UBERON:0000948,9.32e-14,18;UBERON:0005498,9.32e-14,18;UBERON:0004140,9.32e-14,18;UBERON:0009881,9.32e-14,18;UBERON:0004141,9.32e-14,18;UBERON:0003084,9.32e-14,18;UBERON:0007005,9.32e-14,18;UBERON:0004139,9.32e-14,18;UBERON:0004291,9.32e-14,18;UBERON:0002048,2.06e-13,14;UBERON:0000117,2.06e-13,14;UBERON:0000171,2.06e-13,14;UBERON:0000170,2.06e-13,14;UBERON:0005597,2.06e-13,14;UBERON:0000118,2.06e-13,14;UBERON:0004535,3.65e-13,23;UBERON:0001009,3.65e-13,23;UBERON:0005153,9.52e-12,17;UBERON:0004872,7.24e-11,33;UBERON:0005178,2.60e-10,17;UBERON:0005181,2.60e-10,17;UBERON:0002224,2.60e-10,17;UBERON:0000915,2.60e-10,17;UBERON:0008947,2.60e-10,17;UBERON:0003258,2.60e-10,17;UBERON:0005157,2.47e-09,20;UBERON:0003103,2.81e-08,43;UBERON:0002100,4.32e-07,90;UBERON:0005177,5.31e-07,79|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.87095238332354,0,0,0,0,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,6.68874533693462,2.0057340795713,2.57836046138721,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.270011876663381,0.630974884054146,0.571301968807607,0,0,0.383381884072945,0,0,0.255374676170375,0.46081959976873,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.763991238884051,0.294628585473668,0.427115042397309,0.372798891650601,3.10477392666055,0.831287161174641,5.50742528533188,3.44169550792555,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0.517875767294343,2.67195850316685,0.867426633830679,2.43572382649713,0.922461989024234,0.753613202763113,1.05829836422134,1.0053327306374,1.73036477414062,3.32578520915797,0.884610551949874,1.7794353494215,1.76673214768315,1.93950101254089,0,0.585561594023094,1.04723353406728,0.510914110417183,0,0,0,0.599162557619291,0,0,0.521472960576829,0.511430914660661,0.62336413367868,0.811206315338788,0.305518091550949,1.7416975885413,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.544291993210623,0.512454881139399,0.374806898238915,0.517406741478031,0.646703978798527,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,1.74126083261083,0.411564272815887,0.199034266818493,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,1.65721314909647,1.57411385397923,1.69693824176116,1.39520366850245,1.3413670069981,2.33530684734339,0.987359099480883,2.79084688934462,4.37771571547621,3.94739966048397,3.29325172936576,5.50246316917524,0.841159794256509,0.720332286654991,0,0,0.853153002140936,0,0.38660238396628,0.201683524623343,0.667134131534611,0.760902504450237,0,0.658795818896044,0.251335208800269,1.1937388322469,0.58489226135736,2.69645822596266,0,0.398282546508734,0.758671603812327,0.456994050438915,0,1.01825663922657,0.581857461502877,1.47285221769669,2.33975187359752,2.21415221969403,1.56998727841375,1.60416313098341,0.889357881261447,0.667380422864376,0.196558995113203,0.224862112384854,0.811440485554012,0.241177159752417,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,1.07638448113147,0.964887042726734,7.02062122633098,0.568474235311454,1.62964976442026,1.01847051465113,1.64283173801951,1.50755631697634,1.90434912708811,6.04914308359176,4.88668946729192,5.75808193086815,5.10255259703959,6.39066927391378,7.9435091658312,9.40218880779825,0,0,0.983528546038072,1.10374698521893,1.12385412991454,0.586058432961016,0,2.27223834483936,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0.851640511249612,1.06839362200353,0.651547837414304,0.494910368917606,0,0.242780636154981,0,0.943025398779491,0.885905678642318,1.84461088766356,0.775284879504663,1.81766864738753,2.13898427030833,0.316036757935816,1.0541860857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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18132 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|TSSclassifier=NA | |||
|UniProt=G3UX69 | |||
|association_with_transcript=0bp_to_ENSMUST00000173389_5end | |||
|cluster_id=chr17:34701278..34701288,+ | |||
|description=CAGE_peak_3_at_Notch4_5end | |||
|id=chr17:34701278..34701288,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.58e-10!18;UBERON:0000948!7.58e-10!18;UBERON:0005498!7.58e-10!18;UBERON:0004140!7.58e-10!18;UBERON:0009881!7.58e-10!18;UBERON:0004141!7.58e-10!18;UBERON:0003084!7.58e-10!18;UBERON:0007005!7.58e-10!18;UBERON:0004139!7.58e-10!18;UBERON:0004291!7.58e-10!18;UBERON:0002048!1.56e-08!14;UBERON:0000117!1.56e-08!14;UBERON:0000171!1.56e-08!14;UBERON:0000170!1.56e-08!14;UBERON:0005597!1.56e-08!14;UBERON:0000118!1.56e-08!14;UBERON:0004535!5.80e-08!23;UBERON:0001009!5.80e-08!23;UBERON:0005153!7.82e-08!17;UBERON:0005157!1.09e-07!27;UBERON:0000468!1.72e-07!333;UBERON:0005177!6.55e-07!85;UBERON:0004872!6.64e-07!33;UBERON:0000025!7.26e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.32e-14,18;UBERON:0000948,9.32e-14,18;UBERON:0005498,9.32e-14,18;UBERON:0004140,9.32e-14,18;UBERON:0009881,9.32e-14,18;UBERON:0004141,9.32e-14,18;UBERON:0003084,9.32e-14,18;UBERON:0007005,9.32e-14,18;UBERON:0004139,9.32e-14,18;UBERON:0004291,9.32e-14,18;UBERON:0002048,2.06e-13,14;UBERON:0000117,2.06e-13,14;UBERON:0000171,2.06e-13,14;UBERON:0000170,2.06e-13,14;UBERON:0005597,2.06e-13,14;UBERON:0000118,2.06e-13,14;UBERON:0004535,3.65e-13,23;UBERON:0001009,3.65e-13,23;UBERON:0005153,9.52e-12,17;UBERON:0004872,7.24e-11,33;UBERON:0005178,2.60e-10,17;UBERON:0005181,2.60e-10,17;UBERON:0002224,2.60e-10,17;UBERON:0000915,2.60e-10,17;UBERON:0008947,2.60e-10,17;UBERON:0003258,2.60e-10,17;UBERON:0005157,2.47e-09,20;UBERON:0003103,2.81e-08,43;UBERON:0002100,4.32e-07,90;UBERON:0005177,5.31e-07,79 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.87095238332354,0,0,0,0,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,6.68874533693462,2.0057340795713,2.57836046138721,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.270011876663381,0.630974884054146,0.571301968807607,0,0,0.383381884072945,0,0,0.255374676170375,0.46081959976873,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.763991238884051,0.294628585473668,0.427115042397309,0.372798891650601,3.10477392666055,0.831287161174641,5.50742528533188,3.44169550792555,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0.517875767294343,2.67195850316685,0.867426633830679,2.43572382649713,0.922461989024234,0.753613202763113,1.05829836422134,1.0053327306374,1.73036477414062,3.32578520915797,0.884610551949874,1.7794353494215,1.76673214768315,1.93950101254089,0,0.585561594023094,1.04723353406728,0.510914110417183,0,0,0,0.599162557619291,0,0,0.521472960576829,0.511430914660661,0.62336413367868,0.811206315338788,0.305518091550949,1.7416975885413,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.544291993210623,0.512454881139399,0.374806898238915,0.517406741478031,0.646703978798527,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,1.74126083261083,0.411564272815887,0.199034266818493,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,1.65721314909647,1.57411385397923,1.69693824176116,1.39520366850245,1.3413670069981,2.33530684734339,0.987359099480883,2.79084688934462,4.37771571547621,3.94739966048397,3.29325172936576,5.50246316917524,0.841159794256509,0.720332286654991,0,0,0.853153002140936,0,0.38660238396628,0.201683524623343,0.667134131534611,0.760902504450237,0,0.658795818896044,0.251335208800269,1.1937388322469,0.58489226135736,2.69645822596266,0,0.398282546508734,0.758671603812327,0.456994050438915,0,1.01825663922657,0.581857461502877,1.47285221769669,2.33975187359752,2.21415221969403,1.56998727841375,1.60416313098341,0.889357881261447,0.667380422864376,0.196558995113203,0.224862112384854,0.811440485554012,0.241177159752417,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,1.07638448113147,0.964887042726734,7.02062122633098,0.568474235311454,1.62964976442026,1.01847051465113,1.64283173801951,1.50755631697634,1.90434912708811,6.04914308359176,4.88668946729192,5.75808193086815,5.10255259703959,6.39066927391378,7.9435091658312,9.40218880779825,0,0,0.983528546038072,1.10374698521893,1.12385412991454,0.586058432961016,0,2.27223834483936,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0.851640511249612,1.06839362200353,0.651547837414304,0.494910368917606,0,0.242780636154981,0,0.943025398779491,0.885905678642318,1.84461088766356,0.775284879504663,1.81766864738753,2.13898427030833,0.316036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.517434735131018,0.643011105094777,0.886701168211368,1.42695054081656,0.987294123612726,0.608929898229199,1.64270195644597,1.69465656691056,0,0.65954501176592,0.968786560175433,0.422190474497091,0.358117032009409,0.164140899745061,0.582961673259701,0.556275906031529,0.683483523191411,0.82554747185289,0,0.376736914009382,0,0.228778173206523,0,0,0,2.86401185404534,0.632671987162271,1.21991680276109,0.756037385752609,1.46361807210128,0.87345025498471,0.674321731924103,0.661227645802687,1.04702376793612,0.259229946583586,0.621339313086926,0,0.598066184175915,0.330916980914195,0.194451188344048,0.387479470433193,0.844780627453891,0.234714477291508,0.781226309063701,0.104859344425711,0.241584120826006,0.576060012515731,0.316011120628178,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.403865799792591,0,0.403304740547362,0.0974578807397524,0,0.116876902181569,0.453460767230423,0.221985953374065,0.179427713218951,0,0.579568782096571,0.750729901804728,0.915758121336325,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0,0.399024873401031,0.512200817262403,0.729320151204882,0,0.367687016900028,0.888986911206461,1.44224540067226,1.28367683836726,0.505394423527595,0,0.754505365544305,1.03005658216871,1.53660365771686,0.918967503289812,0.476293691283074,1.39061191133827,0.578727661391115,1.23625770240992,0.735994600671987,0.342869252385415,1.24233064311536,0.953744759789284,1.16277133305863,1.12931256498397,0.592302255241736,0.548783918618318,0.526139422875686,0.814824683075171,0,1.06771516311757,1.0835493061312,0.409231043169689,0.619747364743864,0.964533054905707,0.499621155875892,1.16965804222704,1.074355270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| |||
|short_description=p3@Notch4 | |||
}} |
Latest revision as of 08:18, 26 September 2015
Short description: | p3@Notch4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Notch4_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | 0bp_to_ENSMUST00000173389_5end |
EntrezGene: | Notch4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.32e-14 | 18 |
heart | 9.32e-14 | 18 |
primitive heart tube | 9.32e-14 | 18 |
primary heart field | 9.32e-14 | 18 |
anterior lateral plate mesoderm | 9.32e-14 | 18 |
heart tube | 9.32e-14 | 18 |
heart primordium | 9.32e-14 | 18 |
cardiac mesoderm | 9.32e-14 | 18 |
cardiogenic plate | 9.32e-14 | 18 |
heart rudiment | 9.32e-14 | 18 |
lung | 2.06e-13 | 14 |
respiratory tube | 2.06e-13 | 14 |
respiration organ | 2.06e-13 | 14 |
pair of lungs | 2.06e-13 | 14 |
lung primordium | 2.06e-13 | 14 |
lung bud | 2.06e-13 | 14 |
cardiovascular system | 3.65e-13 | 23 |
circulatory system | 3.65e-13 | 23 |
epithelial bud | 9.52e-12 | 17 |
splanchnic layer of lateral plate mesoderm | 7.24e-11 | 33 |
thoracic cavity element | 2.60e-10 | 17 |
thoracic segment organ | 2.60e-10 | 17 |
thoracic cavity | 2.60e-10 | 17 |
thoracic segment of trunk | 2.60e-10 | 17 |
respiratory primordium | 2.60e-10 | 17 |
endoderm of foregut | 2.60e-10 | 17 |
epithelial fold | 2.47e-09 | 20 |
compound organ | 2.81e-08 | 43 |
trunk | 4.32e-07 | 90 |
trunk region element | 5.31e-07 | 79 |