FFCP PHASE1:Mm9::chr9:122203527..122203549,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:122203527..122203549,-
|short_description=p2@Ano10
|description=CAGE_peak_2_at_Ano10_5end
|association_with_transcript=-35bp_to_ENSMUST00000042546,ENSMUST0...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=102566 | |EntrezGene=102566 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BH79 | |UniProt=Q8BH79 | ||
|association_with_transcript=-35bp_to_ENSMUST00000042546,ENSMUST00000111499,NM_133979,uc009ser.1,uc009ses.1,uc009set.1_5end | |||
|cluster_id=chr9:122203527..122203549,- | |||
|description=CAGE_peak_2_at_Ano10_5end | |||
|id=chr9:122203527..122203549,- | |||
|ontology_enrichment_celltype=CL:0000055!1.60e-13!50;CL:0002319!1.29e-12!43;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0000393!2.11e-11!39;CL:0000211!2.11e-11!39;CL:0000540!3.21e-10!33;CL:0000047!3.21e-10!33;CL:0000031!3.21e-10!33;CL:0000404!3.21e-10!33;CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23;CL:0002321!1.85e-09!70;CL:0000220!1.85e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.29e-12,43;CL:0000221,2.55e-12,44;CL:0000133,2.55e-12,44;CL:0000393,2.11e-11,39;CL:0000211,2.11e-11,39;CL:0000540,3.21e-10,33;CL:0000047,3.21e-10,33;CL:0000031,3.21e-10,33;CL:0000404,3.21e-10,33;CL:0000117,4.28e-10,23;CL:0000337,4.28e-10,23;CL:0002321,1.90e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.44e-20!102;UBERON:0000924!5.44e-20!102;UBERON:0006601!5.44e-20!102;UBERON:0000073!1.71e-19!75;UBERON:0001016!1.71e-19!75;UBERON:0001017!2.56e-19!73;UBERON:0005743!2.56e-19!73;UBERON:0002346!8.53e-16!71;UBERON:0003075!8.53e-16!71;UBERON:0007284!8.53e-16!71;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!1.16e-13!34;UBERON:0000955!3.94e-13!50;UBERON:0006238!3.94e-13!50;UBERON:0002616!4.82e-13!49;UBERON:0000033!7.86e-12!63;UBERON:0002791!4.39e-11!29;UBERON:0003528!4.39e-11!29;UBERON:0001893!4.39e-11!29;UBERON:0003080!1.91e-10!40;UBERON:0002780!4.41e-10!39;UBERON:0001890!4.41e-10!39;UBERON:0006240!4.41e-10!39;UBERON:0003056!4.79e-10!49;UBERON:0000956!1.31e-07!21;UBERON:0001869!1.31e-07!21;UBERON:0000203!1.31e-07!21;UBERON:0002619!6.40e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.71e-19,75;UBERON:0001017,2.56e-19,73;UBERON:0004121,1.68e-18,95;UBERON:0000924,1.68e-18,95;UBERON:0006601,1.68e-18,95;UBERON:0000073,1.32e-15,54;UBERON:0001049,4.95e-15,52;UBERON:0005068,4.95e-15,52;UBERON:0006241,4.95e-15,52;UBERON:0007135,4.95e-15,52;UBERON:0002346,1.45e-14,64;UBERON:0003075,1.45e-14,64;UBERON:0007284,1.45e-14,64;UBERON:0002020,1.16e-13,34;UBERON:0010371,1.61e-13,73;UBERON:0010314,4.66e-13,92;UBERON:0000955,4.76e-12,47;UBERON:0006238,4.76e-12,47;UBERON:0002616,5.81e-12,46;UBERON:0003528,4.38e-11,29;UBERON:0002791,4.38e-11,29;UBERON:0001893,4.38e-11,29;UBERON:0003080,1.91e-10,40;UBERON:0002780,4.41e-10,39;UBERON:0001890,4.41e-10,39;UBERON:0006240,4.41e-10,39;UBERON:0003056,4.79e-10,49;UBERON:0000956,1.31e-07,21;UBERON:0001869,1.31e-07,21;UBERON:0000203,1.31e-07,21;UBERON:0002619,6.40e-07,17 | |||
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| ||
|short_description=p2@Ano10 | |||
}} | }} |
Latest revision as of 08:44, 26 September 2015
Short description: | p2@Ano10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ano10_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -35bp_to_ENSMUST00000042546, ENSMUST00000111499, NM_133979, uc009ser.1, uc009ses.1, uc009set.1_5end |
EntrezGene: | Ano10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.29e-12 | 43 |
ectodermal cell | 2.55e-12 | 44 |
neurectodermal cell | 2.55e-12 | 44 |
electrically responsive cell | 2.11e-11 | 39 |
electrically active cell | 2.11e-11 | 39 |
neuron | 3.21e-10 | 33 |
neuronal stem cell | 3.21e-10 | 33 |
neuroblast | 3.21e-10 | 33 |
electrically signaling cell | 3.21e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.28e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.28e-10 | 23 |
embryonic cell | 1.90e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.71e-19 | 75 |
central nervous system | 2.56e-19 | 73 |
ectoderm-derived structure | 1.68e-18 | 95 |
ectoderm | 1.68e-18 | 95 |
presumptive ectoderm | 1.68e-18 | 95 |
regional part of nervous system | 1.32e-15 | 54 |
neural tube | 4.95e-15 | 52 |
neural rod | 4.95e-15 | 52 |
future spinal cord | 4.95e-15 | 52 |
neural keel | 4.95e-15 | 52 |
neurectoderm | 1.45e-14 | 64 |
neural plate | 1.45e-14 | 64 |
presumptive neural plate | 1.45e-14 | 64 |
gray matter | 1.16e-13 | 34 |
ecto-epithelium | 1.61e-13 | 73 |
structure with developmental contribution from neural crest | 4.66e-13 | 92 |
brain | 4.76e-12 | 47 |
future brain | 4.76e-12 | 47 |
regional part of brain | 5.81e-12 | 46 |
brain grey matter | 4.38e-11 | 29 |
regional part of telencephalon | 4.38e-11 | 29 |
telencephalon | 4.38e-11 | 29 |
anterior neural tube | 1.91e-10 | 40 |
regional part of forebrain | 4.41e-10 | 39 |
forebrain | 4.41e-10 | 39 |
future forebrain | 4.41e-10 | 39 |
pre-chordal neural plate | 4.79e-10 | 49 |
cerebral cortex | 1.31e-07 | 21 |
cerebral hemisphere | 1.31e-07 | 21 |
pallium | 1.31e-07 | 21 |
regional part of cerebral cortex | 6.40e-07 | 17 |