FFCP PHASE1:Mm9::chr7:25163506..25163511,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:25163506..25163511,+ to FFCP PHASE1:Mm9::chr7:25163506..25163511,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16534 | |EntrezGene=16534 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3615 | |||
|TSSclassifier=NA | |||
|UniProt=D1MQ07 | |UniProt=D1MQ07 | ||
|association_with_transcript=-148bp_to_uc012ffj.1_5end | |||
|cluster_id=chr7:25163506..25163511,+ | |||
|description=CAGE_peak_3_at_Kcnn4_5end | |||
|id=chr7:25163506..25163511,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.45e-11!32;CL:0002032!6.45e-11!32;CL:0000037!6.45e-11!32;CL:0000566!6.45e-11!32;CL:0000837!6.45e-11!32;CL:0002031!6.15e-08!25;CL:0000738!1.56e-07!17;CL:0002087!1.56e-07!17;CL:0000838!3.32e-07!12;CL:0000084!3.85e-07!11;CL:0000827!3.85e-07!11;CL:0000542!8.53e-07!13;CL:0000051!8.53e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.20e-16,32;CL:0002032,7.20e-16,32;CL:0000037,7.20e-16,32;CL:0000837,7.20e-16,32;CL:0002031,2.66e-11,25;CL:0000084,5.64e-11,11;CL:0000827,5.64e-11,11;CL:0000838,8.53e-10,12;CL:0000791,1.38e-09,9;CL:0000789,1.38e-09,9;CL:0002420,1.38e-09,9;CL:0002419,1.38e-09,9;CL:0000790,1.38e-09,9;CL:0002320,1.76e-09,46;CL:0000134,1.76e-09,46;CL:0000542,8.40e-09,13;CL:0000051,8.40e-09,13;CL:0000624,1.01e-08,8;CL:0000738,1.77e-08,17;CL:0002087,1.77e-08,17;CL:0000049,2.26e-08,19;CL:0000219,5.31e-07,54;CL:0000893,5.99e-07,6;CL:0002489,5.99e-07,6;CL:0000898,5.99e-07,6;CL:0000809,5.99e-07,6;CL:0000810,5.99e-07,6;CL:0000895,5.99e-07,6;CL:0000808,5.99e-07,6;CL:0000894,5.99e-07,6;CL:0000806,5.99e-07,6;CL:0000807,5.99e-07,6;CL:0000805,5.99e-07,6;CL:0002425,5.99e-07,6;CL:0002436,5.99e-07,6;CL:0002427,5.99e-07,6;CL:0002428,5.99e-07,6;CL:0002429,5.99e-07,6;CL:0002433,5.99e-07,6;CL:0002431,5.99e-07,6;CL:0002432,5.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.00e-17!48;UBERON:0002390!2.63e-16!45;UBERON:0003061!2.63e-16!45;UBERON:0002405!4.70e-16!70;UBERON:0004177!2.68e-11!29;UBERON:0005057!3.69e-10!51;UBERON:0003408!1.50e-09!24;UBERON:0001007!1.79e-09!128;UBERON:0001555!1.79e-09!128;UBERON:0007026!1.79e-09!128;UBERON:0004119!2.91e-09!130;UBERON:0000925!2.91e-09!130;UBERON:0006595!2.91e-09!130;UBERON:0002370!5.10e-09!23;UBERON:0000974!5.10e-09!23;UBERON:0004807!5.10e-09!23;UBERON:0005058!5.10e-09!23;UBERON:0003351!5.10e-09!23;UBERON:0009113!5.10e-09!23;UBERON:0003295!5.10e-09!23;UBERON:0009722!5.10e-09!23;UBERON:0005562!5.10e-09!23;UBERON:0007690!5.10e-09!23;UBERON:0004921!5.24e-09!126;UBERON:0004185!5.24e-09!126;UBERON:0006562!3.47e-08!24;UBERON:0001557!3.47e-08!24;UBERON:0001042!3.47e-08!24;UBERON:0008814!3.47e-08!24;UBERON:0009145!3.47e-08!24;UBERON:0000077!6.33e-08!97;UBERON:0000072!1.06e-07!27;UBERON:0001041!1.55e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-26,45;UBERON:0003061,2.09e-26,45;UBERON:0002193,3.08e-25,48;UBERON:0002405,3.08e-25,48;UBERON:0004177,1.79e-20,29;UBERON:0005057,1.79e-20,29;UBERON:0003408,7.10e-17,24;UBERON:0000077,1.06e-16,35;UBERON:0002370,5.86e-16,23;UBERON:0000974,5.86e-16,23;UBERON:0004807,5.86e-16,23;UBERON:0005058,5.86e-16,23;UBERON:0003351,5.86e-16,23;UBERON:0009113,5.86e-16,23;UBERON:0003295,5.86e-16,23;UBERON:0009722,5.86e-16,23;UBERON:0005562,5.86e-16,23;UBERON:0007690,5.86e-16,23;UBERON:0006562,5.15e-15,24;UBERON:0001557,5.15e-15,24;UBERON:0001042,5.15e-15,24;UBERON:0008814,5.15e-15,24;UBERON:0009145,5.15e-15,24;UBERON:0003929,3.98e-13,55;UBERON:0001041,1.14e-12,80;UBERON:0000072,1.29e-12,27;UBERON:0003081,1.03e-11,87;UBERON:0001007,4.07e-11,116;UBERON:0001555,4.07e-11,116;UBERON:0007026,4.07e-11,116;UBERON:0004921,5.78e-11,114;UBERON:0007811,5.84e-11,36;UBERON:0002530,1.02e-10,65;UBERON:0004119,1.10e-10,118;UBERON:0000925,1.10e-10,118;UBERON:0006595,1.10e-10,118;UBERON:0002368,1.26e-09,60;UBERON:0002384,1.76e-09,46;UBERON:0000490,2.56e-09,66;UBERON:0005911,4.00e-09,69;UBERON:0000949,6.25e-09,72;UBERON:0001474,3.06e-08,22;UBERON:0004765,3.06e-08,22;UBERON:0001434,3.06e-08,22;UBERON:0000153,4.60e-08,43;UBERON:0001004,1.59e-07,42;UBERON:0002371,6.14e-07,16;UBERON:0000065,6.40e-07,41 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,9.42600261123507,6.19470377467334,7.49006484230379,3.08192342805909,3.66951931378547,8.56003649656029,10.7527094975367,3.33109761815663,12.1485160433896,8.39474253753776,1.41957974411207,1.64537320326887,1.69755860719212,0.510259740906419,4.0709289992363,2.61199789138935,0.799962113967033,1.14704640533585,0,0.430761996159075,0,0.950117097281869,0,0.886922042621219,0,0,0,0.577703239502549,2.49351968037739,1.22501613757421,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.671130424230945,3.62681071005672,6.04968838456435,0,0,0,0.202316460859598,0,0,0,0,1.3498495759221,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0.529000920747499,0.289864488701678,0,0,0,0,0,1.26399978118577,0.340860645156116,0,0,0.281686839553361,0,0,0,0.865964164044856,0,0.505524445014783,0.68510327831436,0.776813650941515,0.29688427812965,0.520455980298408,0.304465478312141,0.922461989024234,0.301445281105245,0.117588707135705,0.251333182659351,0,0,1.76922110389975,1.13236794963186,4.85851340612866,7.27312879702833,3.72783522436244,0,0,2.29911349687732,9.4653948359677,3.59941638596045,11.9446013448681,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0.203678727700633,3.4833951770826,0.252722758433675,1.68353484709179,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0.348252166522167,0,0,5.61770549850588,6.43369767786788,6.53576048609863,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,1.42358718463353,0.329397909448022,1.50801125280162,0.596869416123452,0.58489226135736,0.898819408654221,1.29682829924817,1.7922714592893,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0,0,0,5.6727335943472,7.46924181430171,7.19558759631532,7.1001042485976,9.40590923034426,7.63877555344259,4.31544206176216,6.32327384422638,6.04035109013779,5.75072826109418,0.744281895337007,0.312037673114561,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0.157635144106191,0.664394068946325,0.318909537314974,0.655453258862952,0.345369963731791,0.289298117163023,1.50791283939272,4.35124547054968,3.93411418415229,2.75936746304733,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0,0.307435147943927,0.516856586336442,0.363533729477506,1.42598951353889,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.882113592219848,0.32977250588296,0.161464426695906,0,0,0,1.1659233465194,0.18542530201051,10.2522528478712,0,3.88908507476395,24.2995309536051,20.5041341581538,16.0144721244566,11.5585332395822,10.3564074719507,9.12119827109197,4.77335309007557,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.674321731924103,0.909188012978695,1.04702376793612,1.8146096260851,6.21339313086926,0,0.149516546043979,0,0,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0,0.241584120826006,0,6.00421129193539,1.41907650703115,2.15693010046137,3.89762468933385,3.93858730468459,2.58285761215644,6.12996792551841,8.12292399460175,7.77441664600737,6.32516495236499,9.47766140286301,9.06358290879698,9.71739600567328,10.8695519028859,0,0,0,0.335769232728157,1.35232715822533,0,0,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,1.87806966329548,1.45864030240976,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.936415074698824,0.512201219238954,0.516919220600519,0.476293691283074,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.676916863133412,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.619747364743864,0.578719832943424,0,0.467863216890817,0.644613162144895,0.382576664137687,0.661774257358546,0.695603506861264 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,9.42600261123507,6.19470377467334,7.49006484230379,3.08192342805909,3.66951931378547,8.56003649656029,10.7527094975367,3.33109761815663,12.1485160433896,8.39474253753776,1.41957974411207,1.64537320326887,1.69755860719212,0.510259740906419,4.0709289992363,2.61199789138935,0.799962113967033,1.14704640533585,0,0.430761996159075,0,0.950117097281869,0,0.886922042621219,0,0,0,0.577703239502549,2.49351968037739,1.22501613757421,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.671130424230945,3.62681071005672,6.04968838456435,0,0,0,0.202316460859598,0,0,0,0,1.3498495759221,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0.529000920747499,0.289864488701678,0,0,0,0,0,1.26399978118577,0.340860645156116,0,0,0.281686839553361,0,0,0,0.865964164044856,0,0.505524445014783,0.68510327831436,0.776813650941515,0.29688427812965,0.520455980298408,0.304465478312141,0.922461989024234,0.301445281105245,0.117588707135705,0.251333182659351,0,0,1.76922110389975,1.13236794963186,4.85851340612866,7.27312879702833,3.72783522436244,0,0,2.29911349687732,9.4653948359677,3.59941638596045,11.9446013448681,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0.203678727700633,3.4833951770826,0.252722758433675,1.68353484709179,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0.348252166522167,0,0,5.61770549850588,6.43369767786788,6.53576048609863,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,1.42358718463353,0.329397909448022,1.50801125280162,0.596869416123452,0.58489226135736,0.898819408654221,1.29682829924817,1.7922714592893,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0,0,0,5.6727335943472,7.46924181430171,7.19558759631532,7.1001042485976,9.40590923034426,7.63877555344259,4.31544206176216,6.32327384422638,6.04035109013779,5.75072826109418,0.744281895337007,0.312037673114561,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0.157635144106191,0.664394068946325,0.318909537314974,0.655453258862952,0.345369963731791,0.289298117163023,1.50791283939272,4.35124547054968,3.93411418415229,2.75936746304733,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0,0.307435147943927,0.516856586336442,0.363533729477506,1.42598951353889,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.882113592219848,0.32977250588296,0.161464426695906,0,0,0,1.1659233465194,0.18542530201051,10.2522528478712,0,3.88908507476395,24.2995309536051,20.5041341581538,16.0144721244566,11.5585332395822,10.3564074719507,9.12119827109197,4.77335309007557,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.674321731924103,0.909188012978695,1.04702376793612,1.8146096260851,6.21339313086926,0,0.149516546043979,0,0,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0,0.241584120826006,0,6.00421129193539,1.41907650703115,2.15693010046137,3.89762468933385,3.93858730468459,2.58285761215644,6.12996792551841,8.12292399460175,7.77441664600737,6.32516495236499,9.47766140286301,9.06358290879698,9.71739600567328,10.8695519028859,0,0,0,0.335769232728157,1.35232715822533,0,0,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,1.87806966329548,1.45864030240976,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.936415074698824,0.512201219238954,0.516919220600519,0.476293691283074,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.676916863133412,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.619747364743864,0.578719832943424,0,0.467863216890817,0.644613162144895,0.382576664137687,0.661774257358546,0.695603506861264 | ||
|short_description=p3@Kcnn4 | |||
}} | }} |
Latest revision as of 09:25, 26 September 2015
Short description: | p3@Kcnn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3615 |
Association with transcript: | -148bp_to_uc012ffj.1_5end |
EntrezGene: | Kcnn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data