FFCP PHASE1:Mm9::chr17:35299949..35299985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53761 | |EntrezGene=53761 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q7TSC1 | |UniProt=Q7TSC1 | ||
|association_with_transcript=7bp_to_ENSMUST00000171992_5end | |association_with_transcript=7bp_to_ENSMUST00000171992_5end | ||
|cluster_id=chr17:35299949..35299985,- | |||
|description=CAGE_peak_4_at_Prrc2a_5end | |description=CAGE_peak_4_at_Prrc2a_5end | ||
|id=chr17:35299949..35299985,- | |id=chr17:35299949..35299985,- | ||
|ontology_enrichment_celltype=CL:0002319!1.36e-13!43;CL:0000221!1.22e-12!44;CL:0000133!1.22e-12!44;CL:0000055!1.66e-12!50;CL:0000540!1.76e-11!33;CL:0000047!1.76e-11!33;CL:0000031!1.76e-11!33;CL:0000404!1.76e-11!33;CL:0000393!3.93e-11!39;CL:0000211!3.93e-11!39;CL:0000117!1.13e-10!23;CL:0000337!1.13e-10!23 | |ontology_enrichment_celltype=CL:0002319!1.36e-13!43;CL:0000221!1.22e-12!44;CL:0000133!1.22e-12!44;CL:0000055!1.66e-12!50;CL:0000540!1.76e-11!33;CL:0000047!1.76e-11!33;CL:0000031!1.76e-11!33;CL:0000404!1.76e-11!33;CL:0000393!3.93e-11!39;CL:0000211!3.93e-11!39;CL:0000117!1.13e-10!23;CL:0000337!1.13e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.32e-14,43;CL:0000221,9.13e-13,44;CL:0000133,9.13e-13,44;CL:0000540,1.51e-11,33;CL:0000047,1.51e-11,33;CL:0000031,1.51e-11,33;CL:0000404,1.51e-11,33;CL:0000393,3.42e-11,39;CL:0000211,3.42e-11,39;CL:0000117,1.06e-10,23;CL:0000337,1.06e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.61e-19!73;UBERON:0005743!1.61e-19!73;UBERON:0000073!1.28e-17!75;UBERON:0001016!1.28e-17!75;UBERON:0004121!3.76e-14!102;UBERON:0000924!3.76e-14!102;UBERON:0006601!3.76e-14!102;UBERON:0000955!3.11e-13!50;UBERON:0006238!3.11e-13!50;UBERON:0002616!3.18e-13!49;UBERON:0002020!5.26e-13!34;UBERON:0002346!1.40e-12!71;UBERON:0003075!1.40e-12!71;UBERON:0007284!1.40e-12!71;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0002791!6.51e-12!29;UBERON:0003528!6.51e-12!29;UBERON:0001893!6.51e-12!29;UBERON:0002780!9.02e-12!39;UBERON:0001890!9.02e-12!39;UBERON:0006240!9.02e-12!39;UBERON:0003080!1.28e-11!40;UBERON:0003056!6.61e-10!49;UBERON:0000956!1.41e-09!21;UBERON:0001869!1.41e-09!21;UBERON:0000203!1.41e-09!21;UBERON:0000033!6.98e-09!63;UBERON:0002619!7.48e-08!17;UBERON:0000153!1.52e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!1.61e-19!73;UBERON:0005743!1.61e-19!73;UBERON:0000073!1.28e-17!75;UBERON:0001016!1.28e-17!75;UBERON:0004121!3.76e-14!102;UBERON:0000924!3.76e-14!102;UBERON:0006601!3.76e-14!102;UBERON:0000955!3.11e-13!50;UBERON:0006238!3.11e-13!50;UBERON:0002616!3.18e-13!49;UBERON:0002020!5.26e-13!34;UBERON:0002346!1.40e-12!71;UBERON:0003075!1.40e-12!71;UBERON:0007284!1.40e-12!71;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0002791!6.51e-12!29;UBERON:0003528!6.51e-12!29;UBERON:0001893!6.51e-12!29;UBERON:0002780!9.02e-12!39;UBERON:0001890!9.02e-12!39;UBERON:0006240!9.02e-12!39;UBERON:0003080!1.28e-11!40;UBERON:0003056!6.61e-10!49;UBERON:0000956!1.41e-09!21;UBERON:0001869!1.41e-09!21;UBERON:0000203!1.41e-09!21;UBERON:0000033!6.98e-09!63;UBERON:0002619!7.48e-08!17;UBERON:0000153!1.52e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-19,73;UBERON:0001016,1.04e-17,75;UBERON:0000073,1.90e-14,54;UBERON:0004121,2.44e-13,95;UBERON:0000924,2.44e-13,95;UBERON:0006601,2.44e-13,95;UBERON:0002020,4.87e-13,34;UBERON:0001049,1.74e-12,52;UBERON:0005068,1.74e-12,52;UBERON:0006241,1.74e-12,52;UBERON:0007135,1.74e-12,52;UBERON:0003528,6.07e-12,29;UBERON:0002791,6.07e-12,29;UBERON:0001893,6.07e-12,29;UBERON:0002346,7.55e-12,64;UBERON:0003075,7.55e-12,64;UBERON:0007284,7.55e-12,64;UBERON:0002780,8.43e-12,39;UBERON:0001890,8.43e-12,39;UBERON:0006240,8.43e-12,39;UBERON:0003080,1.20e-11,40;UBERON:0000955,1.63e-11,47;UBERON:0006238,1.63e-11,47;UBERON:0002616,1.69e-11,46;UBERON:0003056,6.25e-10,49;UBERON:0000956,1.34e-09,21;UBERON:0001869,1.34e-09,21;UBERON:0000203,1.34e-09,21;UBERON:0010371,2.15e-09,73;UBERON:0010314,3.75e-09,92;UBERON:0002619,7.17e-08,17 | |||
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| ||
|short_description=p4@Prrc2a | |short_description=p4@Prrc2a | ||
}} | }} |
Latest revision as of 09:38, 26 September 2015
Short description: | p4@Prrc2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prrc2a_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENSMUST00000171992_5end |
EntrezGene: | Prrc2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.32e-14 | 43 |
ectodermal cell | 9.13e-13 | 44 |
neurectodermal cell | 9.13e-13 | 44 |
neuron | 1.51e-11 | 33 |
neuronal stem cell | 1.51e-11 | 33 |
neuroblast | 1.51e-11 | 33 |
electrically signaling cell | 1.51e-11 | 33 |
electrically responsive cell | 3.42e-11 | 39 |
electrically active cell | 3.42e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.06e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.59e-19 | 73 |
nervous system | 1.04e-17 | 75 |
regional part of nervous system | 1.90e-14 | 54 |
ectoderm-derived structure | 2.44e-13 | 95 |
ectoderm | 2.44e-13 | 95 |
presumptive ectoderm | 2.44e-13 | 95 |
gray matter | 4.87e-13 | 34 |
neural tube | 1.74e-12 | 52 |
neural rod | 1.74e-12 | 52 |
future spinal cord | 1.74e-12 | 52 |
neural keel | 1.74e-12 | 52 |
brain grey matter | 6.07e-12 | 29 |
regional part of telencephalon | 6.07e-12 | 29 |
telencephalon | 6.07e-12 | 29 |
neurectoderm | 7.55e-12 | 64 |
neural plate | 7.55e-12 | 64 |
presumptive neural plate | 7.55e-12 | 64 |
regional part of forebrain | 8.43e-12 | 39 |
forebrain | 8.43e-12 | 39 |
future forebrain | 8.43e-12 | 39 |
anterior neural tube | 1.20e-11 | 40 |
brain | 1.63e-11 | 47 |
future brain | 1.63e-11 | 47 |
regional part of brain | 1.69e-11 | 46 |
pre-chordal neural plate | 6.25e-10 | 49 |
cerebral cortex | 1.34e-09 | 21 |
cerebral hemisphere | 1.34e-09 | 21 |
pallium | 1.34e-09 | 21 |
ecto-epithelium | 2.15e-09 | 73 |
structure with developmental contribution from neural crest | 3.75e-09 | 92 |
regional part of cerebral cortex | 7.17e-08 | 17 |