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FFCP PHASE1:Mm9::chr10:80204967..80205025,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11776
|EntrezGene=11776
|HGNC=
|HGNC=
|MCL_coexpression_id=1920
|TSSclassifier=NA
|UniProt=O54774
|UniProt=O54774
|association_with_transcript=-11bp_to_ENSMUST00000020420,NM_007460,uc007gek.1_5end
|association_with_transcript=-11bp_to_ENSMUST00000020420,NM_007460,uc007gek.1_5end
|cluster_id=chr10:80204967..80205025,-
|description=CAGE_peak_1_at_Ap3d1_5end
|description=CAGE_peak_1_at_Ap3d1_5end
|id=chr10:80204967..80205025,-
|id=chr10:80204967..80205025,-
|ontology_enrichment_celltype=CL:0000393!4.43e-09!39;CL:0000211!4.43e-09!39;CL:0000055!6.64e-09!50;CL:0002319!3.19e-07!43;CL:0000117!4.12e-07!23;CL:0000337!4.12e-07!23
|ontology_enrichment_celltype=CL:0000393!4.43e-09!39;CL:0000211!4.43e-09!39;CL:0000055!6.64e-09!50;CL:0002319!3.19e-07!43;CL:0000117!4.12e-07!23;CL:0000337!4.12e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000393,4.43e-09,39;CL:0000211,4.43e-09,39;CL:0002319,3.19e-07,43;CL:0000117,4.12e-07,23;CL:0000337,4.12e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.53e-18!73;UBERON:0005743!2.53e-18!73;UBERON:0000073!5.72e-18!75;UBERON:0001016!5.72e-18!75;UBERON:0000955!1.97e-15!50;UBERON:0006238!1.97e-15!50;UBERON:0001049!2.81e-15!52;UBERON:0005068!2.81e-15!52;UBERON:0006241!2.81e-15!52;UBERON:0007135!2.81e-15!52;UBERON:0002616!8.19e-15!49;UBERON:0004121!7.38e-14!102;UBERON:0000924!7.38e-14!102;UBERON:0006601!7.38e-14!102;UBERON:0007023!1.14e-11!51;UBERON:0000033!1.25e-11!63;UBERON:0002020!2.50e-11!34;UBERON:0003080!3.74e-11!40;UBERON:0002780!1.35e-10!39;UBERON:0001890!1.35e-10!39;UBERON:0006240!1.35e-10!39;UBERON:0002346!1.67e-10!71;UBERON:0003075!1.67e-10!71;UBERON:0007284!1.67e-10!71;UBERON:0002791!7.29e-10!29;UBERON:0003528!7.29e-10!29;UBERON:0001893!7.29e-10!29;UBERON:0003056!6.84e-09!49;UBERON:0000956!2.57e-07!21;UBERON:0001869!2.57e-07!21;UBERON:0000203!2.57e-07!21;UBERON:0002619!6.40e-07!17
|ontology_enrichment_uberon=UBERON:0001017!2.53e-18!73;UBERON:0005743!2.53e-18!73;UBERON:0000073!5.72e-18!75;UBERON:0001016!5.72e-18!75;UBERON:0000955!1.97e-15!50;UBERON:0006238!1.97e-15!50;UBERON:0001049!2.81e-15!52;UBERON:0005068!2.81e-15!52;UBERON:0006241!2.81e-15!52;UBERON:0007135!2.81e-15!52;UBERON:0002616!8.19e-15!49;UBERON:0004121!7.38e-14!102;UBERON:0000924!7.38e-14!102;UBERON:0006601!7.38e-14!102;UBERON:0007023!1.14e-11!51;UBERON:0000033!1.25e-11!63;UBERON:0002020!2.50e-11!34;UBERON:0003080!3.74e-11!40;UBERON:0002780!1.35e-10!39;UBERON:0001890!1.35e-10!39;UBERON:0006240!1.35e-10!39;UBERON:0002346!1.67e-10!71;UBERON:0003075!1.67e-10!71;UBERON:0007284!1.67e-10!71;UBERON:0002791!7.29e-10!29;UBERON:0003528!7.29e-10!29;UBERON:0001893!7.29e-10!29;UBERON:0003056!6.84e-09!49;UBERON:0000956!2.57e-07!21;UBERON:0001869!2.57e-07!21;UBERON:0000203!2.57e-07!21;UBERON:0002619!6.40e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.53e-18,73;UBERON:0001016,5.72e-18,75;UBERON:0000073,2.00e-16,54;UBERON:0004121,7.41e-16,95;UBERON:0000924,7.41e-16,95;UBERON:0006601,7.41e-16,95;UBERON:0001049,2.81e-15,52;UBERON:0005068,2.81e-15,52;UBERON:0006241,2.81e-15,52;UBERON:0007135,2.81e-15,52;UBERON:0000955,8.05e-14,47;UBERON:0006238,8.05e-14,47;UBERON:0002616,3.21e-13,46;UBERON:0002346,1.07e-12,64;UBERON:0003075,1.07e-12,64;UBERON:0007284,1.07e-12,64;UBERON:0007023,1.14e-11,51;UBERON:0010371,2.03e-11,73;UBERON:0002020,2.50e-11,34;UBERON:0003080,3.74e-11,40;UBERON:0002780,1.35e-10,39;UBERON:0001890,1.35e-10,39;UBERON:0006240,1.35e-10,39;UBERON:0003528,7.29e-10,29;UBERON:0002791,7.29e-10,29;UBERON:0001893,7.29e-10,29;UBERON:0003056,6.84e-09,49;UBERON:0000956,2.57e-07,21;UBERON:0001869,2.57e-07,21;UBERON:0000203,2.57e-07,21;UBERON:0002619,6.40e-07,17
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1991174061,53.6763393214881,47.846365984058,54.3629569637619,51.0968399166056,55.9687037497006,61.4941710596499,60.7273785402949,55.3455935955956,78.9100927620396,324.687132682094,42.163665984402,35.4081169578189,44.1404197540988,41.8477828067849,41.5632068707314,41.6618197192427,38.0196803744334,55.2608745123496,89.3861247056222,156.688323404279,64.4662686081484,38.1123404745509,41.0843828659309,39.8856926541831,38.4907395685085,46.2927556640347,46.395443514708,45.045305788246,44.0213721773924,43.2854661800399,53.9420090482097,58.4747284438515,52.1468181690586,60.4253584278711,53.7351009168051,42.1773311410723,45.3952114443947,46.3361541164857,89.6399716309364,72.6331179996074,69.9639204700953,58.736935867664,86.7719739981179,88.1012874482624,82.3982173347847,85.3614315024701,101.221524400432,90.4308926097248,86.1149043024259,101.928397535003,107.626767570589,124.161020061672,108.729665467882,38.2975312585612,61.4498305037588,47.122475188141,61.2628927012101,44.2283773145043,43.3870679942033,58.0063959562216,54.599290168307,50.7052351155068,49.0232590821767,49.4284634785968,51.6836175397849,48.0380933320497,50.8359710094662,47.9011811089815,48.1056628195904,45.4266557703833,49.7705788796359,47.3898785923803,47.6924501235447,46.9730875768019,45.9662337952684,43.1569503804651,50.7258994046827,48.9368778159719,45.6918882615053,50.3051925400125,50.5093845960658,51.3339550337357,57.7976539807471,45.7931169959312,43.8344946571257,46.2431078781749,44.4668734203722,54.9783841296253,73.1944993358182,58.7168337197975,50.0649555932535,63.3164379147872,49.633069301891,49.8515846583906
|phase1_expression=44.2010818009231,141.335040093941,148.329752040989,139.133537201142,134.740951355567,69.8377771153462,72.887143865804,48.8086162609158,27.3130120974233,34.641549895655,20.7173741552861,26.085495991475,50.1618138698433,54.2880699021974,39.6400616560639,35.8381223279992,43.3728364439451,50.6316775399971,51.8292559029693,40.7414065726109,91.1664070419468,41.9007814067736,28.470777016144,50.7175980255099,50.4700418347774,91.8771142584032,75.8141113239972,65.5032547365103,53.3965808672411,51.9182067305457,40.5766834499208,55.2476685909879,71.9625801473947,95.0890086092632,32.0625297923915,30.4209401006041,34.300451852078,65.2909343949576,41.4107732597614,49.7347556775108,72.3524730278148,56.0097297665925,47.5800145970531,123.25298479809,112.933901378539,103.887461723512,72.7623950243676,59.3028425354815,67.2239719167484,74.4666513454505,77.6924640020762,67.5637052515366,41.2745210902031,48.5992635147601,51.0862574696545,84.3810950197906,89.1118998209533,72.7097650111194,79.7126855786815,71.4137822017244,81.1304196487909,69.1242845421029,78.2579420577803,74.6916765343561,116.686230782903,98.7567359775079,66.2116244245674,51.8694712184099,58.2735621173644,69.6630641791524,57.6290394102787,78.2683697266422,75.3161724645002,55.978295241234,62.2995561618536,89.164222301172,106.812404569407,96.5316275924019,96.6185094181771,83.3521338454825,77.1240835568313,71.8860451368329,98.8307816464889,79.9122906244986,87.0950012327818,81.9067467616796,73.4637872923371,81.0837589340058,55.5830259065571,51.9932333534684,76.2343605285413,36.9982267101996,45.5580793584193,58.8276478885221,51.3323369783659,41.6665005000522,56.037323632569,88.453337418012,70.9215792565832,68.9012170295163,34.5066378452867,80.8456807710202,50.9610479413291,35.5533351576666,32.0406740696597,41.044298206966,36.9032844860792,47.5004939631289,54.8948313332004,73.9241852542827,39.2076838491467,53.2814587046247,51.427255888101,41.4487261519712,50.210377946946,43.8576403740567,91.9565279971871,72.5888771737957,51.3074120130927,42.0593809863264,46.8184019136034,44.1236480353052,76.4206220994301,130.58023546715,100.953312684085,75.1043742313259,28.3961845079031,22.1964010467561,26.6847476853436,108.148841650282,102.937635634191,63.958065225448,106.032835317289,81.5732308883754,112.413332106722,82.9052854276242,46.3369105518939,54.9878810096611,80.6185599403422,97.8554629872104,41.3783008621398,39.5431619625573,46.8161537493908,41.2931200869859,54.361162821911,54.7045585616309,53.5973864481649,88.9939595342214,51.3051823180164,56.9209301305136,51.729630504201,52.1685843177628,54.7753080974428,63.0336421405121,60.2941659675274,40.0058876305171,18.2575428701441,21.1025283834066,26.7113689431857,45.3605441852749,38.6967998968809,38.8934052755792,46.4019681747012,36.5981471050171,41.0350520280426,40.460906386571,42.9237442239391,38.7660936659003,33.899329082177,39.0718564508247,45.2363957265875,45.1757961144277,51.5942770933969,45.7643887972868,107.037583819141,55.7742999095722,83.9263708778847,74.0461586657924,43.0842266081173,47.8407544032503,54.7686710618897,67.9673477980664,70.9385959865136,68.1007741482962,61.214248939242,61.9268069762281,62.8338022000674,65.2577228294975,69.4072150144068,80.8937467788799,58.1411354162927,61.5346534355995,45.8996320306458,41.5864585899413,54.0997131230786,46.8398054044223,55.8583163042762,40.3280964369332,55.0157872981038,54.3205344564936,49.7685967257158,55.1585322730448,44.7643466901595,44.2139530147649,40.2945939982066,46.9961814884344,51.3236107112912,48.4766091102358,43.0317689510599,54.0868738407524,34.8590737566326,31.3000011034413,43.1304619582064,39.4469404528614,37.1324831006327,44.2013036407446,46.6433275156972,54.0336743926971,77.4115866798074,39.0352308247199,47.7487380975136,39.5506049856188,48.3461911474314,60.3022526790537,63.5576521165657,55.6130896394727,60.0589899044588,53.8159195846523,53.2578927316007,61.7764696478332,56.1226191064161,62.3437442486315,99.5222473999197,106.605514028467,99.3363831498453,87.7478853249049,92.3165892429804,75.7187495385633,46.2296545962225,39.1329937166778,51.4278397648498,65.9841477861319,60.7493981606493,64.7605442451416,65.2800115061415,58.3137653424995,68.817819284732,73.9407320515619,54.5497133566202,116.318316544694,56.4921539128909,52.1732218745058,47.8887660499514,73.0817644768332,118.143173122567,47.3422240502214,52.3019753549019,72.4243506262649,89.7717754357549,79.3182681695333,56.3373679106722,61.4372002816984,67.3780045147123,78.3771159680824,99.0934920604988,95.9160552208138,91.9186935535228,49.1566786705477,59.7637119076326,52.9412476528033,62.246422008438,67.4234130535827,54.9593728811084,73.9849826348476,72.0442143755591,74.5648889440647,84.2418480569955,53.4231459530395,57.3198714770465,49.2153467413752,50.4945015133267,54.3306378156153,67.0405924248657,91.4146738911813,51.7738768817494,52.4222644626585,42.9651303497731,47.6572196221868,46.4760374251486,42.7815183896197,23.9669586291336,29.5297564402918,25.2905952062096,75.418978823194,43.4961991174061,53.6763393214881,47.846365984058,54.3629569637619,51.0968399166056,55.9687037497006,61.4941710596499,60.7273785402949,55.3455935955956,78.9100927620396,324.687132682094,42.163665984402,35.4081169578189,44.1404197540988,41.8477828067849,41.5632068707314,41.6618197192427,38.0196803744334,55.2608745123496,89.3861247056222,156.688323404279,64.4662686081484,38.1123404745509,41.0843828659309,39.8856926541831,38.4907395685085,46.2927556640347,46.395443514708,45.045305788246,44.0213721773924,43.2854661800399,53.9420090482097,58.4747284438515,52.1468181690586,60.4253584278711,53.7351009168051,42.1773311410723,45.3952114443947,46.3361541164857,89.6399716309364,72.6331179996074,69.9639204700953,58.736935867664,86.7719739981179,88.1012874482624,82.3982173347847,85.3614315024701,101.221524400432,90.4308926097248,86.1149043024259,101.928397535003,107.626767570589,124.161020061672,108.729665467882,38.2975312585612,61.4498305037588,47.122475188141,61.2628927012101,44.2283773145043,43.3870679942033,58.0063959562216,54.599290168307,50.7052351155068,49.0232590821767,49.4284634785968,51.6836175397849,48.0380933320497,50.8359710094662,47.9011811089815,48.1056628195904,45.4266557703833,49.7705788796359,47.3898785923803,47.6924501235447,46.9730875768019,45.9662337952684,43.1569503804651,50.7258994046827,48.9368778159719,45.6918882615053,50.3051925400125,50.5093845960658,51.3339550337357,57.7976539807471,45.7931169959312,43.8344946571257,46.2431078781749,44.4668734203722,54.9783841296253,73.1944993358182,58.7168337197975,50.0649555932535,63.3164379147872,49.633069301891,49.8515846583906
|short_description=p1@Ap3d1
|short_description=p1@Ap3d1
}}
}}

Latest revision as of 10:11, 26 September 2015

Short description:p1@Ap3d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ap3d1_5end
Coexpression cluster:MCL_coexpression_mm9:1920
Association with transcript: -11bp_to_ENSMUST00000020420, NM_007460, uc007gek.1_5end
EntrezGene:Ap3d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ap3d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G744.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5141.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6148.33
CD326+ enterocyte, pool1.CNhs13542.11848-124I3139.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I4134.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I769.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I872.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E948.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E450.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E854.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A335.84
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A543.37
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A250.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A451.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A640.74
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A391.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H241.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I928.47
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D150.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D250.47
GP2+ M cell, pool1.CNhs13228.11845-124H991.88
GP2+ M cell, pool2.CNhs13231.11846-124I175.81
GP2+ M cell, pool3.CNhs13240.11847-124I265.50
Ileum epithelium, pool1.CNhs13199.10252-104B953.40
Ileum epithelium, pool2.CNhs13232.10253-104C151.92
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C840.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I355.25
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G671.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F532.06
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F630.42
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F734.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H141.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H349.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G972.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H256.01
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8123.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9112.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3103.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B772.76
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C259.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B867.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C374.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C477.69
Mouse Astrocytes, donor3.CNhs12107.11633-122C467.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A241.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I948.60
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A151.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C184.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E189.11
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C572.71
Mouse Granule cells, donor1.CNhs12131.11713-123C379.71
Mouse Granule cells, donor2.CNhs12357.11731-123E371.41
Mouse Granule cells, donor3.CNhs12108.11636-122C781.13
Mouse Meningeal cells, donor1.CNhs12132.11716-123C669.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D178.26
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C774.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7116.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D298.76
Mouse Microglia, donor1.CNhs12629.11718-123C866.21
Mouse Microglia, donor2.CNhs12634.11736-123E851.87
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D558.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F569.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D957.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F178.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D575.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D255.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F262.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D689.16
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3106.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F396.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D796.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D483.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F477.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D871.89
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E498.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E579.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I687.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D681.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F673.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E181.08
Mouse Schwann, donor1.CNhs12507.11728-123D955.58
Mouse Schwann, donor2.CNhs12573.11746-123F951.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G376.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C445.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C858.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.33
Mouse hepatocyte, donor8.CNhs13091.11824-124F641.67
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A756.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I788.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E370.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I868.90
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H180.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I850.96
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G132.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G336.90
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B647.50
accessory axillary lymph node, adult.CNhs10475.1063-29H954.89
adrenal gland, adult.CNhs10508.49-24D773.92
adrenal gland, embryo E14.CNhs11038.406-44C539.21
adrenal gland, embryo E16.CNhs11004.1254-43D653.28
adrenal gland, embryo E17.CNhs11043.1263-45I151.43
adrenal gland, embryo E18.CNhs11026.1262-18F541.45
adrenal gland, neonate N00.CNhs11191.1311-23C150.21
adrenal gland, neonate N25.CNhs11223.1377-27I343.86
amnion, adult pregnant day17.5.CNhs10488.583-22A891.96
aorta, adult.CNhs10498.46-23H172.59
bone (os femoris), adult.CNhs10483.56-12G251.31
bone (os femoris), neonate N02.CNhs11227.1985-43F542.06
bone (os femoris), neonate N16.CNhs11225.1525-43A646.82
bone (os femoris), neonate N20.CNhs11195.1350-25C344.12
cecum, adult.CNhs10467.37-13H476.42
cerebellum, adult.CNhs10494.15-8B2130.58
cerebellum, neonate N30.CNhs11135.1395-42I2100.95
colon, adult.CNhs10468.36-18H775.10
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.68
corpora quadrigemina, adult.CNhs10501.16-22A4108.15
corpus striatum, adult.CNhs10487.19-21D8102.94
corpus striatum, neonate N00.CNhs11226.630-43F163.96
cortex, adult.CNhs10473.12-14D5106.03
cortex, neonate N30.CNhs11107.1392-42F281.57
diencephalon, adult.CNhs10482.20-12F2112.41
diencephalon, neonate N30.CNhs11201.1388-42B282.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B146.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A254.99
epididymis, adult.CNhs10490.58-23B280.62
eyeball, adult.CNhs10484.31-12G497.86
eyeball, embryo E12.CNhs11016.345-16C641.38
eyeball, embryo E14.CNhs10521.399-16E239.54
eyeball, embryo E15.CNhs10593.426-16C946.82
eyeball, embryo E17.CNhs11023.1261-18D441.29
eyeball, neonate N00.CNhs11207.633-15C654.36
eyeball, neonate N01.CNhs11140.1532-43E754.70
eyeball, neonate N02.CNhs11205.1551-44G853.60
eyeball, neonate N16.CNhs11188.777-19A288.99
forelimb, embryo E11.CNhs10596.335-25E251.31
forelimb, embryo E12.CNhs10600.359-14H256.92
forelimb, embryo E13.CNhs10589.384-1E251.73
forelimb, embryo E14.CNhs10577.413-26A852.17
forelimb, embryo E15.CNhs11007.437-20E754.78
forelimb, embryo E17.CNhs10598.1517-43C463.03
forelimb, embryo E18.CNhs11008.1520-43B560.29
gonad, embryo E13.CNhs11044.1564-45I640.01
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D221.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.71
heart, embryo E11.CNhs10586.331-24E945.36
heart, embryo E12.CNhs11015.353-12F538.70
heart, embryo E13.CNhs11013.376-3I938.89
heart, embryo E14.CNhs10597.403-26D446.40
heart, embryo E15.CNhs11017.431-16C836.60
heart, embryo E16.CNhs11021.457-17C641.04
heart, embryo E17.CNhs11025.479-18E540.46
heart, embryo E18.CNhs11030.1283-20G342.92
heart, neonate N00.CNhs11213.639-21E338.77
heart, neonate N03.CNhs11221.1349-25I233.90
heart, neonate N10.CNhs11118.749-24G139.07
heart, neonate N16.CNhs11209.782-15G145.24
heart, neonate N20.CNhs11127.821-26I645.18
heart, neonate N25.CNhs11196.1351-25D351.59
heart, neonate N30.CNhs11202.1390-42D245.76
hippocampus, adult.CNhs10478.13-16E8107.04
hippocampus, neonate N00.CNhs11228.627-43G155.77
intestinal mucosa, adult.CNhs10506.860-29I383.93
intestine, adult.CNhs10496.178-9A374.05
intestine, embryo E12.CNhs11019.1251-16I543.08
intestine, embryo E13.CNhs11010.381-16D547.84
intestine, embryo E15.CNhs10602.976-16D854.77
intestine, embryo E16.CNhs10585.463-22H467.97
intestine, embryo E17.CNhs10582.482-18D370.94
intestine, embryo E18.CNhs10526.1289-20F768.10
intestine, neonate N00.CNhs11126.644-26D161.21
intestine, neonate N01.CNhs11192.1322-23E961.93
intestine, neonate N06.CNhs11102.688-20B862.83
intestine, neonate N07.CNhs11095.720-20F265.26
intestine, neonate N10.CNhs11098.755-23A569.41
intestine, neonate N20.CNhs11187.827-18D180.89
intestine, neonate N25.CNhs11121.1352-25E358.14
intestine, neonate N30.CNhs11131.1384-42G161.53
kidney, embryo E14.CNhs10606.411-4I945.90
kidney, embryo E15.CNhs10997.434-16F841.59
kidney, embryo E16.CNhs10584.464-22A554.10
kidney, embryo E17.CNhs11028.483-18I246.84
kidney, embryo E18.CNhs11001.1288-20C755.86
kidney, neonate N00.CNhs11214.646-21G740.33
kidney, neonate N10.CNhs11206.758-6D555.02
kidney, neonate N20.CNhs11113.832-19I154.32
kidney, neonate N25.CNhs11122.1353-25F349.77
kidney, neonate N30.CNhs11203.1385-42H155.16
liver, adult pregnant day01.CNhs10466.508-5B244.76
liver, embryo E12.CNhs10601.355-15F844.21
liver, embryo E13.CNhs10524.378-3H640.29
liver, embryo E14.CNhs10594.409-16E147.00
liver, embryo E15.CNhs10520.433-16D751.32
liver, embryo E16.CNhs10523.462-17F548.48
liver, embryo E17.CNhs10510.481-18A343.03
liver, embryo E18.CNhs10579.499-43G454.09
liver, neonate N00.CNhs11117.641-24F434.86
liver, neonate N03.CNhs11123.1345-25G231.30
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H239.45
liver, neonate N10.CNhs11115.751-24B937.13
liver, neonate N20.CNhs11220.823-25A344.20
liver, neonate N25.CNhs11198.1368-26H146.64
liver, neonate N30.CNhs11106.1382-42D154.03
lung, adult.CNhs10474.28-22B177.41
lung, embryo E12.CNhs10522.354-16G239.04
lung, embryo E14.CNhs10604.404-26F847.75
lung, embryo E15.CNhs11020.432-17C539.55
lung, embryo E16.CNhs10998.458-17B648.35
lung, embryo E17.CNhs10605.480-44A660.30
lung, embryo E18.CNhs10583.1287-20I663.56
lung, neonate N00.CNhs11224.640-42C655.61
lung, neonate N06.CNhs11212.683-20E560.06
lung, neonate N07.CNhs11111.715-19A353.82
lung, neonate N10.CNhs11219.750-23E653.26
lung, neonate N20.CNhs11109.822-18A461.78
lung, neonate N25.CNhs11119.1359-25C756.12
lung, neonate N30.CNhs11133.1394-42H262.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A199.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1106.61
mammary gland, adult lactating day02.CNhs10480.595-22B699.34
mammary gland, adult pregnant day19.CNhs10476.588-5H287.75
medulla oblongata, adult.CNhs10477.17-12C292.32
medulla oblongata, neonate N30.CNhs11200.1396-42A375.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C746.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C239.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E151.43
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E265.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E360.75
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D764.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D865.28
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D958.31
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D468.82
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D573.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D654.55
olfactory brain, adult.CNhs10489.18-22I9116.32
ovary, adult.CNhs10507.91-2I756.49
ovary, embryo E18.CNhs11040.505-44H752.17
ovary, neonate N00.CNhs11217.1299-22I447.89
oviduct, adult pregnant day01.CNhs10500.988-6G673.08
pancreas, adult.CNhs10486.34-16E4118.14
pancreas, embryo E14.CNhs11012.405-44F447.34
pancreas, embryo E15.CNhs11042.1556-45F252.30
pancreas, embryo E16.CNhs11003.460-26E572.42
pancreas, embryo E17.CNhs10599.1558-45G389.77
pancreas, embryo E18.CNhs10580.1535-43I779.32
pancreas, neonate N00.CNhs11105.645-26G956.34
pancreas, neonate N01.CNhs11138.1531-43D761.44
pancreas, neonate N02.CNhs11139.1539-43D867.38
pancreas, neonate N16.CNhs11136.787-43B678.38
pancreas, neonate N25.CNhs11094.1555-45E299.09
pancreas, neonate N30.CNhs11182.1548-44H595.92
pituitary gland, adult.CNhs10493.21-1G891.92
pituitary gland, embryo E12.CNhs11018.346-16E649.16
pituitary gland, embryo E13.CNhs11009.370-44C759.76
pituitary gland, embryo E14.CNhs11037.398-44A552.94
pituitary gland, embryo E15.CNhs10592.427-16B962.25
pituitary gland, embryo E16.CNhs11036.449-43F667.42
pituitary gland, embryo E17.CNhs11039.1265-44F554.96
pituitary gland, neonate N00.CNhs11190.1308-22E973.98
placenta, adult pregnant day10.CNhs10472.539-13I772.04
placenta, adult pregnant day17.CNhs10464.577-18G374.56
prostate, adult.CNhs10470.859-1F884.24
skin, adult.CNhs10492.30-1C353.42
skin, neonate N00.CNhs11124.650-25G457.32
skin, neonate N03.CNhs11215.662-22H349.22
skin, neonate N06.CNhs11097.693-20I550.49
skin, neonate N10.CNhs11108.762-6C454.33
small intestine, neonate N16.CNhs11114.790-21I167.04
spinal cord, adult.CNhs10505.24-13C991.41
spleen, adult.CNhs10465.25-2G251.77
spleen, embryo E16.CNhs11035.461-43C152.42
spleen, embryo E18.CNhs11011.1271-21F242.97
spleen, neonate N10.CNhs11116.752-24D147.66
spleen, neonate N20.CNhs11112.824-19H146.48
spleen, neonate N25.CNhs11099.1354-25G342.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.29
stomach, adult.CNhs10503.33-1H675.42
stomach, embryo E12.CNhs10588.356-43E343.50
stomach, embryo E15.CNhs10603.1252-16G853.68
stomach, embryo E16.CNhs11022.459-17D447.85
stomach, embryo E17.CNhs11006.1035-18D554.36
stomach, embryo E18.CNhs10999.1286-20C651.10
stomach, neonate N03.CNhs11193.1340-24B855.97
stomach, neonate N07.CNhs11210.718-18A961.49
stomach, neonate N25.CNhs11104.1355-25E460.73
stomach, neonate N30.CNhs11134.1386-42I155.35
submandibular gland, adult.CNhs10469.59-29C178.91
testis, adult.CNhs10504.57-7G5324.69
testis, embryo E13.CNhs11031.389-23F542.16
testis, embryo E15.CNhs11034.443-27C535.41
testis, embryo E16.CNhs11033.470-26G544.14
testis, embryo E17.CNhs11029.486-18I541.85
testis, embryo E18.CNhs11027.503-18G541.56
testis, neonate N00.CNhs11189.1300-22B741.66
testis, neonate N07.CNhs11222.726-26I438.02
testis, neonate N10.CNhs11204.763-44D955.26
testis, neonate N20.CNhs11110.839-18H389.39
testis, neonate N30.CNhs11130.1391-42E2156.69
thymus, adult.CNhs10471.38-12B564.47
thymus, embryo E14.CNhs11041.402-44I438.11
thymus, embryo E15.CNhs11005.430-45I241.08
thymus, embryo E16.CNhs11002.456-26C539.89
thymus, embryo E17.CNhs10581.478-18C138.49
thymus, embryo E18.CNhs10595.1273-19G446.29
thymus, neonate N02.CNhs11181.1541-43F846.40
thymus, neonate N03.CNhs11137.2104-43C745.05
thymus, neonate N06.CNhs11197.681-26C444.02
thymus, neonate N07.CNhs11211.713-19D343.29
thymus, neonate N10.CNhs11194.748-24E453.94
thymus, neonate N20.CNhs11186.820-7A258.47
thymus, neonate N25.CNhs11125.1362-25G752.15
thymus, neonate N30.CNhs11132.1393-42G260.43
tongue, adult.CNhs10499.32-1B453.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H342.18
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F745.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G546.34
urinary bladder, adult.CNhs10481.879-12E489.64
uterus, adult pregnant day19.CNhs10497.590-15F572.63
uterus, adult.CNhs10509.92-27E569.96
vagina, adult.CNhs10502.89-27D558.74
vesicular gland, adult.CNhs10491.51-27F886.77
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A188.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A282.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A385.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7101.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A490.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A586.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6101.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7107.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8124.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9108.73
whole body, embryo E11.CNhs11014.324-5I838.30
whole body, embryo E12.CNhs10587.857-27C961.45
whole body, embryo E13.CNhs10512.372-23H247.12
whole body, embryo E14.5.CNhs10578.420-27D261.26
whole body, embryo E14.CNhs10519.395-14B144.23
whole body, embryo E16.CNhs10514.453-14F243.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G558.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G554.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G550.71
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G549.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G551.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G548.04
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G547.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G548.11
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G545.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G547.39
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G547.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G546.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G543.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G550.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G548.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G545.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G550.31
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G550.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G551.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G557.80
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G545.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G543.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G546.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G544.47
whole body, embryo E17.5.CNhs10513.490-9F954.98
whole body, embryo E17.CNhs10517.475-3I573.19
whole body, embryo E18.CNhs10516.493-3B358.72
whole body, neonate N00.CNhs10525.657-19C250.06
whole body, neonate N01.CNhs10576.659-23C663.32
whole body, neonate N06.CNhs10515.692-21D149.63
whole body, neonate N10.CNhs10518.761-6B449.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell4.43e-0939
electrically active cell4.43e-0939
neural cell3.19e-0743
CNS neuron (sensu Vertebrata)4.12e-0723
neuroblast (sensu Vertebrata)4.12e-0723

Uber anatomy
Ontology termp-valuen
central nervous system2.53e-1873
nervous system5.72e-1875
regional part of nervous system2.00e-1654
ectoderm-derived structure7.41e-1695
ectoderm7.41e-1695
presumptive ectoderm7.41e-1695
neural tube2.81e-1552
neural rod2.81e-1552
future spinal cord2.81e-1552
neural keel2.81e-1552
brain8.05e-1447
future brain8.05e-1447
regional part of brain3.21e-1346
neurectoderm1.07e-1264
neural plate1.07e-1264
presumptive neural plate1.07e-1264
adult organism1.14e-1151
ecto-epithelium2.03e-1173
gray matter2.50e-1134
anterior neural tube3.74e-1140
regional part of forebrain1.35e-1039
forebrain1.35e-1039
future forebrain1.35e-1039
brain grey matter7.29e-1029
regional part of telencephalon7.29e-1029
telencephalon7.29e-1029
pre-chordal neural plate6.84e-0949
cerebral cortex2.57e-0721
cerebral hemisphere2.57e-0721
pallium2.57e-0721
regional part of cerebral cortex6.40e-0717
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