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FFCP PHASE1:Mm9::chr6:103460954..103461002,+: Difference between revisions

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(Created page with "{{FFCP |id=chr6:103460954..103461002,+ |short_description=p5@Chl1 |description=CAGE_peak_5_at_Chl1_5end |association_with_transcript=84bp_to_ENSMUST00000032163,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr6:103460954..103461002,+
|DHSsupport=NA
|short_description=p5@Chl1
|DPIdataset=NA
|description=CAGE_peak_5_at_Chl1_5end
|association_with_transcript=84bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|EntrezGene=12661
|EntrezGene=12661
|HGNC=
|HGNC=
|MCL_coexpression_id=1203
|TSSclassifier=NA
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|association_with_transcript=84bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|cluster_id=chr6:103460954..103461002,+
|description=CAGE_peak_5_at_Chl1_5end
|id=chr6:103460954..103461002,+
|ontology_enrichment_celltype=CL:0000540!1.44e-19!33;CL:0000047!1.44e-19!33;CL:0000031!1.44e-19!33;CL:0000404!1.44e-19!33;CL:0002319!3.88e-19!43;CL:0000221!4.46e-19!44;CL:0000133!4.46e-19!44;CL:0000393!1.42e-13!39;CL:0000211!1.42e-13!39;CL:0000055!2.35e-13!50;CL:0000117!2.93e-13!23;CL:0000337!2.93e-13!23;CL:0000107!2.16e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,8.44e-25,33;CL:0000047,8.44e-25,33;CL:0000031,8.44e-25,33;CL:0000404,8.44e-25,33;CL:0002319,6.46e-22,43;CL:0000221,4.61e-21,44;CL:0000133,4.61e-21,44;CL:0000393,8.19e-19,39;CL:0000211,8.19e-19,39;CL:0000117,1.19e-16,23;CL:0000337,1.19e-16,23;CL:0000107,4.36e-09,9;CL:0002321,4.60e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.25e-33!75;UBERON:0001016!5.25e-33!75;UBERON:0001017!4.51e-32!73;UBERON:0005743!4.51e-32!73;UBERON:0004121!3.53e-31!102;UBERON:0000924!3.53e-31!102;UBERON:0006601!3.53e-31!102;UBERON:0001049!8.91e-21!52;UBERON:0005068!8.91e-21!52;UBERON:0006241!8.91e-21!52;UBERON:0007135!8.91e-21!52;UBERON:0002346!1.25e-20!71;UBERON:0003075!1.25e-20!71;UBERON:0007284!1.25e-20!71;UBERON:0002020!1.20e-19!34;UBERON:0000955!7.64e-19!50;UBERON:0006238!7.64e-19!50;UBERON:0002616!1.50e-18!49;UBERON:0000033!4.54e-18!63;UBERON:0002791!1.99e-16!29;UBERON:0003528!1.99e-16!29;UBERON:0001893!1.99e-16!29;UBERON:0003080!8.73e-16!40;UBERON:0002780!2.99e-15!39;UBERON:0001890!2.99e-15!39;UBERON:0006240!2.99e-15!39;UBERON:0003056!5.79e-15!49;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!4.31e-10!17;UBERON:0007811!7.45e-10!86;UBERON:0000153!1.36e-09!94;UBERON:0000010!5.76e-08!11;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0002410!2.16e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.37e-38,75;UBERON:0001017,1.13e-36,73;UBERON:0004121,2.41e-32,95;UBERON:0000924,2.41e-32,95;UBERON:0006601,2.41e-32,95;UBERON:0000073,6.39e-25,54;UBERON:0002020,7.30e-24,34;UBERON:0001049,1.25e-23,52;UBERON:0005068,1.25e-23,52;UBERON:0006241,1.25e-23,52;UBERON:0007135,1.25e-23,52;UBERON:0002346,6.10e-22,64;UBERON:0003075,6.10e-22,64;UBERON:0007284,6.10e-22,64;UBERON:0010371,1.55e-21,73;UBERON:0003528,9.87e-20,29;UBERON:0002791,9.87e-20,29;UBERON:0001893,9.87e-20,29;UBERON:0000955,2.67e-19,47;UBERON:0006238,2.67e-19,47;UBERON:0002616,6.26e-19,46;UBERON:0003080,1.80e-17,40;UBERON:0002780,8.38e-17,39;UBERON:0001890,8.38e-17,39;UBERON:0006240,8.38e-17,39;UBERON:0000956,1.89e-14,21;UBERON:0001869,1.89e-14,21;UBERON:0000203,1.89e-14,21;UBERON:0003056,5.95e-14,49;UBERON:0002619,1.38e-11,17;UBERON:0010314,4.48e-11,92;UBERON:0000010,7.96e-10,11;UBERON:0002021,1.89e-09,10;UBERON:0000411,1.89e-09,10;UBERON:0001950,1.89e-09,10;UBERON:0002410,4.36e-09,9;UBERON:0003076,8.67e-07,12;UBERON:0003057,8.67e-07,12
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.878744730937887,1.94429899074283,0.139986421625363,5.75010257459886,0,0,0,0,0,0,7.08107613008592,6.87688273053643,7.60597684207415,0.338844532069132,0,0,0,0,0.599200221036809,3.07374644257244,12.7538223139428,6.88530285491622,6.09942387919008,7.14127461009509,5.74258206474195,5.63457676388789,3.06705507258356,5.51531271966013,3.30347642998166,8.42736431362239,7.37311359629969,5.80299666012853,9.14876436024097,7.8137005583514,6.14202597803038,8.4414391504752,8.09830713217094,17.3830865429464,25.3421591822403,9.87917062874093,1.06016670666458,14.6608826607164,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,13.1751358655196,14.4518227701284,0,0,0,0,6.89036941262184,2.74500361691176,8.16753288733619,10.2556348913443,9.2057564638919,4.98691306942944,6.32740925964255,0.203678727700633,0.248813941220186,0,0.631325567659422,0,0.459804208866946,0.180062129805349,1.05493372485001,0.95251098811859,1.0249097622788,1.12442069471675,0.776110112217047,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,3.1342694986995,2.26360350048738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,13.6688466566683,28.0929591795446,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0.951128130562796,0.474529061544512,0.988193728344065,1.50801125280162,0.994782360205754,1.9496408711912,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,7.70642831941401,5.50894926983355,0,0,6.62567260774139,5.0757036758563,14.8642144435631,23.8968797952552,26.9586395639697,23.4953520554731,18.2164815753702,15.4895604692995,24.903130010631,2.89189184779626,0,0.35613120733451,0.488660878060728,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,1.36175842301515,0,0,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,0.304464949114599,0,0,0.661585194164886,5.44124634706884,3.22928853391811,2.29189114726992,0.716234064018819,2.1338316966858,0.874442509889552,7.04616147639937,0,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,2.23651413839534,1.62008011232702,2.50905955217362,3.71216358368502,1.75323650300267,2.23164330458407,1.83229159388821,0.518459893167171,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,4.30787728868902,0,0,0,0.965947970160952,0,0,2.14368379079066,0,15.2482997506608,11.9684561491866,12.6037012956667,15.1230800462445,8.90607275701835,6.7985450765073,13.5004500046361,10.8077088773813,11.7817026335893,10.8729665467882,0.103787347584177,1.19707462020309,1.02440163452481,3.40349403895612,1.25767897576789,2.20612210140017,4.00044110042907,2.06035057238894,3.20919209591815,4.04315538822076,3.8021894983536,3.2066478035633,2.99652823903624,3.84150914429216,2.92920891673628,2.85776214769844,2.66533949673168,1.73618298417335,2.47251540481984,3.09117732282234,2.05721551431249,4.43689515398344,2.38436189947321,3.34296758254356,3.95259397744389,2.36920902096694,2.92684756596436,3.6829759601298,2.98769050460896,1.12228454331548,4.62676570684279,3.74317033027141,4.09231043169689,2.94379998253335,3.66522560864169,4.24677982494508,3.04111090979031,3.43793686477277,1.14772999241306,1.10295709559758,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.878744730937887,1.94429899074283,0.139986421625363,5.75010257459886,0,0,0,0,0,0,7.08107613008592,6.87688273053643,7.60597684207415,0.338844532069132,0,0,0,0,0.599200221036809,3.07374644257244,12.7538223139428,6.88530285491622,6.09942387919008,7.14127461009509,5.74258206474195,5.63457676388789,3.06705507258356,5.51531271966013,3.30347642998166,8.42736431362239,7.37311359629969,5.80299666012853,9.14876436024097,7.8137005583514,6.14202597803038,8.4414391504752,8.09830713217094,17.3830865429464,25.3421591822403,9.87917062874093,1.06016670666458,14.6608826607164,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,13.1751358655196,14.4518227701284,0,0,0,0,6.89036941262184,2.74500361691176,8.16753288733619,10.2556348913443,9.2057564638919,4.98691306942944,6.32740925964255,0.203678727700633,0.248813941220186,0,0.631325567659422,0,0.459804208866946,0.180062129805349,1.05493372485001,0.95251098811859,1.0249097622788,1.12442069471675,0.776110112217047,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,3.1342694986995,2.26360350048738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,13.6688466566683,28.0929591795446,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0.951128130562796,0.474529061544512,0.988193728344065,1.50801125280162,0.994782360205754,1.9496408711912,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,7.70642831941401,5.50894926983355,0,0,6.62567260774139,5.0757036758563,14.8642144435631,23.8968797952552,26.9586395639697,23.4953520554731,18.2164815753702,15.4895604692995,24.903130010631,2.89189184779626,0,0.35613120733451,0.488660878060728,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,1.36175842301515,0,0,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,0.304464949114599,0,0,0.661585194164886,5.44124634706884,3.22928853391811,2.29189114726992,0.716234064018819,2.1338316966858,0.874442509889552,7.04616147639937,0,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,2.23651413839534,1.62008011232702,2.50905955217362,3.71216358368502,1.75323650300267,2.23164330458407,1.83229159388821,0.518459893167171,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,4.30787728868902,0,0,0,0.965947970160952,0,0,2.14368379079066,0,15.2482997506608,11.9684561491866,12.6037012956667,15.1230800462445,8.90607275701835,6.7985450765073,13.5004500046361,10.8077088773813,11.7817026335893,10.8729665467882,0.103787347584177,1.19707462020309,1.02440163452481,3.40349403895612,1.25767897576789,2.20612210140017,4.00044110042907,2.06035057238894,3.20919209591815,4.04315538822076,3.8021894983536,3.2066478035633,2.99652823903624,3.84150914429216,2.92920891673628,2.85776214769844,2.66533949673168,1.73618298417335,2.47251540481984,3.09117732282234,2.05721551431249,4.43689515398344,2.38436189947321,3.34296758254356,3.95259397744389,2.36920902096694,2.92684756596436,3.6829759601298,2.98769050460896,1.12228454331548,4.62676570684279,3.74317033027141,4.09231043169689,2.94379998253335,3.66522560864169,4.24677982494508,3.04111090979031,3.43793686477277,1.14772999241306,1.10295709559758,0.463735671240843
|short_description=p5@Chl1
}}
}}

Latest revision as of 10:27, 26 September 2015

Short description:p5@Chl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Chl1_5end
Coexpression cluster:MCL_coexpression_mm9:1203
Association with transcript: 84bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end
EntrezGene:Chl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Chl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.34
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F914.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G128.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.96
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.50
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.90
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system7.37e-3875
central nervous system1.13e-3673
ectoderm-derived structure2.41e-3295
ectoderm2.41e-3295
presumptive ectoderm2.41e-3295
regional part of nervous system6.39e-2554
gray matter7.30e-2434
neural tube1.25e-2352
neural rod1.25e-2352
future spinal cord1.25e-2352
neural keel1.25e-2352
neurectoderm6.10e-2264
neural plate6.10e-2264
presumptive neural plate6.10e-2264
ecto-epithelium1.55e-2173
brain grey matter9.87e-2029
regional part of telencephalon9.87e-2029
telencephalon9.87e-2029
brain2.67e-1947
future brain2.67e-1947
regional part of brain6.26e-1946
anterior neural tube1.80e-1740
regional part of forebrain8.38e-1739
forebrain8.38e-1739
future forebrain8.38e-1739
cerebral cortex1.89e-1421
cerebral hemisphere1.89e-1421
pallium1.89e-1421
pre-chordal neural plate5.95e-1449
regional part of cerebral cortex1.38e-1117
structure with developmental contribution from neural crest4.48e-1192
peripheral nervous system7.96e-1011
occipital lobe1.89e-0910
visual cortex1.89e-0910
neocortex1.89e-0910
autonomic nervous system4.36e-099
posterior neural tube8.67e-0712
chordal neural plate8.67e-0712
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