FFCP PHASE1:Mm9::chr7:28043780..28043834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18223 | |EntrezGene=18223 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1683 | |MCL_coexpression_id=1683 | ||
|TSSclassifier=NA | |||
|UniProt=O08919,Q3UH86 | |UniProt=O08919,Q3UH86 | ||
|association_with_transcript=0bp_to_ENSMUST00000132897,ENSMUST00000149805,NM_010950,uc009fvq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000132897,ENSMUST00000149805,NM_010950,uc009fvq.1_5end | ||
|cluster_id=chr7:28043780..28043834,+ | |||
|description=CAGE_peak_1_at_Numbl_5end | |description=CAGE_peak_1_at_Numbl_5end | ||
|id=chr7:28043780..28043834,+ | |id=chr7:28043780..28043834,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.19e-18!50;CL:0000221!2.16e-17!44;CL:0000133!2.16e-17!44;CL:0002319!2.21e-17!43;CL:0000393!4.66e-13!39;CL:0000211!4.66e-13!39;CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70;CL:0000333!3.86e-07!10;CL:0000095!3.86e-07!10;CL:0000243!3.86e-07!10;CL:0000123!3.86e-07!10;CL:0000125!3.86e-07!10;CL:0000030!3.86e-07!10;CL:0000339!3.86e-07!10 | |ontology_enrichment_celltype=CL:0000055!3.19e-18!50;CL:0000221!2.16e-17!44;CL:0000133!2.16e-17!44;CL:0002319!2.21e-17!43;CL:0000393!4.66e-13!39;CL:0000211!4.66e-13!39;CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70;CL:0000333!3.86e-07!10;CL:0000095!3.86e-07!10;CL:0000243!3.86e-07!10;CL:0000123!3.86e-07!10;CL:0000125!3.86e-07!10;CL:0000030!3.86e-07!10;CL:0000339!3.86e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-17,44;CL:0000133,2.04e-17,44;CL:0002319,2.09e-17,43;CL:0000393,4.48e-13,39;CL:0000211,4.48e-13,39;CL:0000117,3.57e-12,23;CL:0000337,3.57e-12,23;CL:0000540,1.45e-11,33;CL:0000047,1.45e-11,33;CL:0000031,1.45e-11,33;CL:0000404,1.45e-11,33;CL:0002321,2.30e-07,70;CL:0000333,3.78e-07,10;CL:0000095,3.78e-07,10;CL:0000243,3.78e-07,10;CL:0000123,3.78e-07,10;CL:0000125,3.78e-07,10;CL:0000030,3.78e-07,10;CL:0000339,3.78e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.32e-32!75;UBERON:0001016!5.32e-32!75;UBERON:0001017!8.64e-31!73;UBERON:0005743!8.64e-31!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0001049!3.34e-24!52;UBERON:0005068!3.34e-24!52;UBERON:0006241!3.34e-24!52;UBERON:0007135!3.34e-24!52;UBERON:0000955!8.98e-24!50;UBERON:0006238!8.98e-24!50;UBERON:0002616!2.68e-23!49;UBERON:0000033!2.95e-21!63;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003080!4.14e-20!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002020!1.38e-19!34;UBERON:0003056!9.19e-19!49;UBERON:0002791!3.78e-17!29;UBERON:0003528!3.78e-17!29;UBERON:0001893!3.78e-17!29;UBERON:0000956!1.08e-13!21;UBERON:0001869!1.08e-13!21;UBERON:0000203!1.08e-13!21;UBERON:0002619!1.92e-11!17;UBERON:0000153!8.90e-10!94;UBERON:0007811!6.47e-09!86;UBERON:0000025!5.32e-08!114;UBERON:0002021!7.72e-08!10;UBERON:0000411!7.72e-08!10;UBERON:0001950!7.72e-08!10;UBERON:0004111!1.96e-07!122;UBERON:0000468!8.59e-07!333 | |ontology_enrichment_uberon=UBERON:0000073!5.32e-32!75;UBERON:0001016!5.32e-32!75;UBERON:0001017!8.64e-31!73;UBERON:0005743!8.64e-31!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0001049!3.34e-24!52;UBERON:0005068!3.34e-24!52;UBERON:0006241!3.34e-24!52;UBERON:0007135!3.34e-24!52;UBERON:0000955!8.98e-24!50;UBERON:0006238!8.98e-24!50;UBERON:0002616!2.68e-23!49;UBERON:0000033!2.95e-21!63;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003080!4.14e-20!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002020!1.38e-19!34;UBERON:0003056!9.19e-19!49;UBERON:0002791!3.78e-17!29;UBERON:0003528!3.78e-17!29;UBERON:0001893!3.78e-17!29;UBERON:0000956!1.08e-13!21;UBERON:0001869!1.08e-13!21;UBERON:0000203!1.08e-13!21;UBERON:0002619!1.92e-11!17;UBERON:0000153!8.90e-10!94;UBERON:0007811!6.47e-09!86;UBERON:0000025!5.32e-08!114;UBERON:0002021!7.72e-08!10;UBERON:0000411!7.72e-08!10;UBERON:0001950!7.72e-08!10;UBERON:0004111!1.96e-07!122;UBERON:0000468!8.59e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.79e-32,75;UBERON:0001017,7.81e-31,73;UBERON:0004121,2.17e-29,95;UBERON:0000924,2.17e-29,95;UBERON:0006601,2.17e-29,95;UBERON:0000073,5.16e-26,54;UBERON:0001049,3.09e-24,52;UBERON:0005068,3.09e-24,52;UBERON:0006241,3.09e-24,52;UBERON:0007135,3.09e-24,52;UBERON:0002346,1.12e-22,64;UBERON:0003075,1.12e-22,64;UBERON:0007284,1.12e-22,64;UBERON:0000955,2.83e-22,47;UBERON:0006238,2.83e-22,47;UBERON:0002616,8.32e-22,46;UBERON:0010371,1.09e-21,73;UBERON:0003080,3.88e-20,40;UBERON:0002780,9.45e-20,39;UBERON:0001890,9.45e-20,39;UBERON:0006240,9.45e-20,39;UBERON:0002020,1.30e-19,34;UBERON:0003056,8.66e-19,49;UBERON:0003528,3.58e-17,29;UBERON:0002791,3.58e-17,29;UBERON:0001893,3.58e-17,29;UBERON:0010314,5.57e-16,92;UBERON:0000956,1.04e-13,21;UBERON:0001869,1.04e-13,21;UBERON:0000203,1.04e-13,21;UBERON:0002619,1.86e-11,17;UBERON:0000025,4.45e-08,114;UBERON:0002021,7.55e-08,10;UBERON:0000411,7.55e-08,10;UBERON:0001950,7.55e-08,10;UBERON:0004111,1.66e-07,122 | |||
|phase1_expression=16.4953312517938,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0,0,0.809901069559304,0.699561878128147,0.946386496074713,0.411343300817216,1.27316895539409,11.4808441703944,1.39007331681239,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,8.25539875497521,3.07532393792285,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,1.17646297606203,3.41522742479223,1.45653105909346,17.1219672446785,18.4506014819517,19.8230492334616,95.4517440104608,57.3406161280574,70.5192646577655,54.2459418417251,54.7346908555167,119.314628422926,0.671130424230945,0,1.00828139742739,27.7840190918823,29.7994777536307,26.814948798427,42.6887732413751,49.1961610722991,66.5522973681488,59.6366376441673,68.4756993005577,7.64914759689189,2.96659908770092,4.9733608046227,42.2436155830951,47.2588515545512,41.5795345356995,48.0621140460819,52.5812403378455,34.849420097264,33.130281142742,34.9098777762619,29.0411777185256,72.6182841421917,52.8556228797066,28.7296510691672,33.0254046500923,47.6109498706,41.4439025518916,45.3194632384381,24.2889209131201,26.449842671489,31.1708425464693,39.4802304534715,38.1556104541596,40.0758808524396,38.0145490532584,39.7506406161692,10.1452571045587,3.44169550792555,0,0.539703191637817,0,0,3.37066608316204,16.8726019352277,11.1707981979234,12.0135455333516,16.6195235336483,16.6824420638613,10.1922095882658,21.3320010945999,7.79367747640371,9.62767488805375,3.53867111510348,2.16949371466214,0,10.0940654564081,14.3992821215893,12.1786191324856,9.4552353874984,8.89263579260473,11.0533384707563,8.79666139307728,20.517182321953,7.80836527367523,1.76922110389975,19.8973225435313,8.17113618303456,9.21262980956922,1.86391761218122,18.737971008739,24.2958179903608,3.32094171771169,1.55759661857696,0.599902730993408,0.762421362438388,28.0108495687018,37.972550033946,34.1779837746991,64.8364714317191,60.8602788446187,24.3112012134685,33.5839414550258,29.0242186973401,9.82815067819735,2.77995034277042,4.20883711772948,9.75903322220278,15.1735388926092,15.6654052930654,16.2761203262572,21.9077527267276,16.3985561964608,25.2994656311268,11.6416516832557,11.8562396113063,19.4779262572854,20.0584281546902,25.2075092291711,21.409638190371,24.3776516565517,25.1054206417691,13.9323986772945,0.702213187313235,1.02939162845886,1.70498099637356,9.32065976409758,7.73935997937617,7.20248245844059,10.180023630164,6.29645541591692,8.33042409591843,6.0458825635106,7.51165523918934,8.75740067753771,9.05079174524142,6.07419617092652,7.21512404958116,6.14039947186396,3.51280184465681,5.77087600669599,60.1429252893404,31.488811388061,1.65209391491899,0.793351699990633,12.1574302805083,12.5407802804637,9.79392706047909,9.88249270654378,11.3412802360884,7.03834816616469,5.21981967698963,7.74085087202851,8.29406189040889,7.56034593756373,8.96834800747953,2.69645822596266,3.02593269824572,3.58454291857861,12.1387456609972,9.59687505921722,12.3978509240388,8.14605311381257,7.95205197387266,11.01132372278,7.33543830641385,2.36176236767363,2.511979645462,3.82531208157582,1.48226313543574,3.17005700860579,3.73462090715086,2.47348323623339,1.42002084971952,1.4470629585145,3.05551022137704,1.72617682470486,5.18832725680113,1.92192989231657,1.43768206527355,4.09355042435354,2.80833905803104,2.77836765741823,1.61457672169721,3.37710464954357,9.79191907883005,15.5382957651798,17.6002174557388,12.5611363473639,13.3773441524446,10.7204004762762,17.139142143793,19.7084984336377,15.6058792665129,17.2742457926044,16.7427507090361,11.7981586595331,8.63424909329478,13.4523624480806,1.50791283939272,2.71952841909355,2.45882136509518,5.24279817978992,14.7706542788769,17.3473296156461,26.8853310417748,7.57412781613119,11.9893123378178,10.1514073517126,19.1726823982191,12.4263774935327,16.0415045339324,21.5138163399513,12.9539424535966,20.7501659117031,21.7408277870588,32.1321316421807,15.7553494581178,29.7369558124316,27.2021222120472,25.570369060743,1.32745138339963,15.5379607139188,16.3254720760966,6.41257271170054,13.5838870725155,11.3751004739253,10.0787034335606,6.18007340111759,8.91243445961803,5.68866164284469,4.21674434299995,2.06271086496374,19.4050575279659,12.6042765821917,23.9313564998096,25.5061071687595,24.2956120089915,23.5446839234733,29.7833727289839,45.6697423671899,39.659518662767,15.4637411730589,5.73373834942901,11.5420377059036,30.6782410722221,17.3098094543807,18.0252239444736,12.1464265811345,5.82961673259701,14.6485988588303,1.70870880797853,12.3832120777933,5.92622487583077,2.44878994106098,1.23024804948923,2.0590035588587,2.54967644990783,2.51912614182584,3.04039942369732,7.63736494412091,18.663823621287,15.0456405673868,14.688726351765,13.1725626489115,17.0322799722019,13.3515702920973,16.4480376893418,11.5172614472973,5.83267379813068,2.4853572523477,2.81846469342095,11.5127740453864,11.913011312911,20.0284723994369,19.1156538747042,18.9230860549672,18.3077292287376,1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| ||
|short_description=p1@Numbl | |short_description=p1@Numbl | ||
}} | }} |
Latest revision as of 11:37, 26 September 2015
Short description: | p1@Numbl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Numbl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1683 |
Association with transcript: | 0bp_to_ENSMUST00000132897, ENSMUST00000149805, NM_010950, uc009fvq.1_5end |
EntrezGene: | Numbl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.04e-17 | 44 |
neurectodermal cell | 2.04e-17 | 44 |
neural cell | 2.09e-17 | 43 |
electrically responsive cell | 4.48e-13 | 39 |
electrically active cell | 4.48e-13 | 39 |
CNS neuron (sensu Vertebrata) | 3.57e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-12 | 23 |
neuron | 1.45e-11 | 33 |
neuronal stem cell | 1.45e-11 | 33 |
neuroblast | 1.45e-11 | 33 |
electrically signaling cell | 1.45e-11 | 33 |
embryonic cell | 2.30e-07 | 70 |
migratory neural crest cell | 3.78e-07 | 10 |
neuron associated cell | 3.78e-07 | 10 |
glial cell (sensu Vertebrata) | 3.78e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.78e-07 | 10 |
glial cell | 3.78e-07 | 10 |
glioblast | 3.78e-07 | 10 |
glioblast (sensu Vertebrata) | 3.78e-07 | 10 |