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FFCP PHASE1:Mm9::chr7:28043780..28043834,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:28043780..28043834,+
|DHSsupport=NA
|short_description=p1@Numbl
|DPIdataset=NA
|description=CAGE_peak_1_at_Numbl_5end
|association_with_transcript=0bp_to_ENSMUST00000132897,ENSMUST00000149805,NM_010950,uc009fvq.1_5end
|EntrezGene=18223
|EntrezGene=18223
|HGNC=
|HGNC=
|MCL_coexpression_id=1683
|TSSclassifier=NA
|UniProt=O08919,Q3UH86
|UniProt=O08919,Q3UH86
|association_with_transcript=0bp_to_ENSMUST00000132897,ENSMUST00000149805,NM_010950,uc009fvq.1_5end
|cluster_id=chr7:28043780..28043834,+
|description=CAGE_peak_1_at_Numbl_5end
|id=chr7:28043780..28043834,+
|ontology_enrichment_celltype=CL:0000055!3.19e-18!50;CL:0000221!2.16e-17!44;CL:0000133!2.16e-17!44;CL:0002319!2.21e-17!43;CL:0000393!4.66e-13!39;CL:0000211!4.66e-13!39;CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70;CL:0000333!3.86e-07!10;CL:0000095!3.86e-07!10;CL:0000243!3.86e-07!10;CL:0000123!3.86e-07!10;CL:0000125!3.86e-07!10;CL:0000030!3.86e-07!10;CL:0000339!3.86e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-17,44;CL:0000133,2.04e-17,44;CL:0002319,2.09e-17,43;CL:0000393,4.48e-13,39;CL:0000211,4.48e-13,39;CL:0000117,3.57e-12,23;CL:0000337,3.57e-12,23;CL:0000540,1.45e-11,33;CL:0000047,1.45e-11,33;CL:0000031,1.45e-11,33;CL:0000404,1.45e-11,33;CL:0002321,2.30e-07,70;CL:0000333,3.78e-07,10;CL:0000095,3.78e-07,10;CL:0000243,3.78e-07,10;CL:0000123,3.78e-07,10;CL:0000125,3.78e-07,10;CL:0000030,3.78e-07,10;CL:0000339,3.78e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.32e-32!75;UBERON:0001016!5.32e-32!75;UBERON:0001017!8.64e-31!73;UBERON:0005743!8.64e-31!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0001049!3.34e-24!52;UBERON:0005068!3.34e-24!52;UBERON:0006241!3.34e-24!52;UBERON:0007135!3.34e-24!52;UBERON:0000955!8.98e-24!50;UBERON:0006238!8.98e-24!50;UBERON:0002616!2.68e-23!49;UBERON:0000033!2.95e-21!63;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003080!4.14e-20!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002020!1.38e-19!34;UBERON:0003056!9.19e-19!49;UBERON:0002791!3.78e-17!29;UBERON:0003528!3.78e-17!29;UBERON:0001893!3.78e-17!29;UBERON:0000956!1.08e-13!21;UBERON:0001869!1.08e-13!21;UBERON:0000203!1.08e-13!21;UBERON:0002619!1.92e-11!17;UBERON:0000153!8.90e-10!94;UBERON:0007811!6.47e-09!86;UBERON:0000025!5.32e-08!114;UBERON:0002021!7.72e-08!10;UBERON:0000411!7.72e-08!10;UBERON:0001950!7.72e-08!10;UBERON:0004111!1.96e-07!122;UBERON:0000468!8.59e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.79e-32,75;UBERON:0001017,7.81e-31,73;UBERON:0004121,2.17e-29,95;UBERON:0000924,2.17e-29,95;UBERON:0006601,2.17e-29,95;UBERON:0000073,5.16e-26,54;UBERON:0001049,3.09e-24,52;UBERON:0005068,3.09e-24,52;UBERON:0006241,3.09e-24,52;UBERON:0007135,3.09e-24,52;UBERON:0002346,1.12e-22,64;UBERON:0003075,1.12e-22,64;UBERON:0007284,1.12e-22,64;UBERON:0000955,2.83e-22,47;UBERON:0006238,2.83e-22,47;UBERON:0002616,8.32e-22,46;UBERON:0010371,1.09e-21,73;UBERON:0003080,3.88e-20,40;UBERON:0002780,9.45e-20,39;UBERON:0001890,9.45e-20,39;UBERON:0006240,9.45e-20,39;UBERON:0002020,1.30e-19,34;UBERON:0003056,8.66e-19,49;UBERON:0003528,3.58e-17,29;UBERON:0002791,3.58e-17,29;UBERON:0001893,3.58e-17,29;UBERON:0010314,5.57e-16,92;UBERON:0000956,1.04e-13,21;UBERON:0001869,1.04e-13,21;UBERON:0000203,1.04e-13,21;UBERON:0002619,1.86e-11,17;UBERON:0000025,4.45e-08,114;UBERON:0002021,7.55e-08,10;UBERON:0000411,7.55e-08,10;UBERON:0001950,7.55e-08,10;UBERON:0004111,1.66e-07,122
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6.0151393358059,14.4705895307481,6.28118714147616,4.60848010012585,0.632022241256357,11.149886840959,7.60061083019722,4.02754551231165,3.40150721768215,3.17890167650024,1.44234539423963,1.62458479892035,2.3222283488074,2.13379058634,1.31074040677893,1.65678397257579,2.11666051608725,2.68816875017609,6.80191150845634,19.5347638969177,12.7393676385455,33.9126925055438,15.6483571166074,30.4045610230915,16.6667978083211,13.076471123823,4.51414893631827,71.1587321697504,75.0330135506698,80.2053718815155,112.220128070428,72.6187470956881,67.985450765073,51.9767325178491,54.9391867933549,66.6119341206781,61.6134770984666,16.2946135707157,27.5327162646711,20.6587662962502,20.9071776678733,18.8651846365184,22.0612210140017,14.6682840349066,16.0707344646337,19.8969909946925,18.4468964587572,14.9552786935241,14.7128546281139,13.6716600906028,15.173961119954,16.7137214660835,15.7176918123414,18.425607825232,16.5901929598786,21.4284668417719,15.1614887738429,15.7719856097291,14.3755402989063,12.8755542571553,17.4415699958794,17.9748916593281,19.1229013835189,14.8171658026946,13.9426947062057,14.9384525230448,16.2731258780744,17.0834426098811,17.0412754509725,17.187703813127,15.8035578009685,20.0622875420387,37.9712078465678,18.2466654587419,22.1317185669747,21.8068698558481,15.8825821766051,13.216466630364
|phase1_expression=16.4953312517938,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0,0,0.809901069559304,0.699561878128147,0.946386496074713,0.411343300817216,1.27316895539409,11.4808441703944,1.39007331681239,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,8.25539875497521,3.07532393792285,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,1.17646297606203,3.41522742479223,1.45653105909346,17.1219672446785,18.4506014819517,19.8230492334616,95.4517440104608,57.3406161280574,70.5192646577655,54.2459418417251,54.7346908555167,119.314628422926,0.671130424230945,0,1.00828139742739,27.7840190918823,29.7994777536307,26.814948798427,42.6887732413751,49.1961610722991,66.5522973681488,59.6366376441673,68.4756993005577,7.64914759689189,2.96659908770092,4.9733608046227,42.2436155830951,47.2588515545512,41.5795345356995,48.0621140460819,52.5812403378455,34.849420097264,33.130281142742,34.9098777762619,29.0411777185256,72.6182841421917,52.8556228797066,28.7296510691672,33.0254046500923,47.6109498706,41.4439025518916,45.3194632384381,24.2889209131201,26.449842671489,31.1708425464693,39.4802304534715,38.1556104541596,40.0758808524396,38.0145490532584,39.7506406161692,10.1452571045587,3.44169550792555,0,0.539703191637817,0,0,3.37066608316204,16.8726019352277,11.1707981979234,12.0135455333516,16.6195235336483,16.6824420638613,10.1922095882658,21.3320010945999,7.79367747640371,9.62767488805375,3.53867111510348,2.16949371466214,0,10.0940654564081,14.3992821215893,12.1786191324856,9.4552353874984,8.89263579260473,11.0533384707563,8.79666139307728,20.517182321953,7.80836527367523,1.76922110389975,19.8973225435313,8.17113618303456,9.21262980956922,1.86391761218122,18.737971008739,24.2958179903608,3.32094171771169,1.55759661857696,0.599902730993408,0.762421362438388,28.0108495687018,37.972550033946,34.1779837746991,64.8364714317191,60.8602788446187,24.3112012134685,33.5839414550258,29.0242186973401,9.82815067819735,2.77995034277042,4.20883711772948,9.75903322220278,15.1735388926092,15.6654052930654,16.2761203262572,21.9077527267276,16.3985561964608,25.2994656311268,11.6416516832557,11.8562396113063,19.4779262572854,20.0584281546902,25.2075092291711,21.409638190371,24.3776516565517,25.1054206417691,13.9323986772945,0.702213187313235,1.02939162845886,1.70498099637356,9.32065976409758,7.73935997937617,7.20248245844059,10.180023630164,6.29645541591692,8.33042409591843,6.0458825635106,7.51165523918934,8.75740067753771,9.05079174524142,6.07419617092652,7.21512404958116,6.14039947186396,3.51280184465681,5.77087600669599,60.1429252893404,31.488811388061,1.65209391491899,0.793351699990633,12.1574302805083,12.5407802804637,9.79392706047909,9.88249270654378,11.3412802360884,7.03834816616469,5.21981967698963,7.74085087202851,8.29406189040889,7.56034593756373,8.96834800747953,2.69645822596266,3.02593269824572,3.58454291857861,12.1387456609972,9.59687505921722,12.3978509240388,8.14605311381257,7.95205197387266,11.01132372278,7.33543830641385,2.36176236767363,2.511979645462,3.82531208157582,1.48226313543574,3.17005700860579,3.73462090715086,2.47348323623339,1.42002084971952,1.4470629585145,3.05551022137704,1.72617682470486,5.18832725680113,1.92192989231657,1.43768206527355,4.09355042435354,2.80833905803104,2.77836765741823,1.61457672169721,3.37710464954357,9.79191907883005,15.5382957651798,17.6002174557388,12.5611363473639,13.3773441524446,10.7204004762762,17.139142143793,19.7084984336377,15.6058792665129,17.2742457926044,16.7427507090361,11.7981586595331,8.63424909329478,13.4523624480806,1.50791283939272,2.71952841909355,2.45882136509518,5.24279817978992,14.7706542788769,17.3473296156461,26.8853310417748,7.57412781613119,11.9893123378178,10.1514073517126,19.1726823982191,12.4263774935327,16.0415045339324,21.5138163399513,12.9539424535966,20.7501659117031,21.7408277870588,32.1321316421807,15.7553494581178,29.7369558124316,27.2021222120472,25.570369060743,1.32745138339963,15.5379607139188,16.3254720760966,6.41257271170054,13.5838870725155,11.3751004739253,10.0787034335606,6.18007340111759,8.91243445961803,5.68866164284469,4.21674434299995,2.06271086496374,19.4050575279659,12.6042765821917,23.9313564998096,25.5061071687595,24.2956120089915,23.5446839234733,29.7833727289839,45.6697423671899,39.659518662767,15.4637411730589,5.73373834942901,11.5420377059036,30.6782410722221,17.3098094543807,18.0252239444736,12.1464265811345,5.82961673259701,14.6485988588303,1.70870880797853,12.3832120777933,5.92622487583077,2.44878994106098,1.23024804948923,2.0590035588587,2.54967644990783,2.51912614182584,3.04039942369732,7.63736494412091,18.663823621287,15.0456405673868,14.688726351765,13.1725626489115,17.0322799722019,13.3515702920973,16.4480376893418,11.5172614472973,5.83267379813068,2.4853572523477,2.81846469342095,11.5127740453864,11.913011312911,20.0284723994369,19.1156538747042,18.9230860549672,18.3077292287376,16.0151393358059,14.4705895307481,6.28118714147616,4.60848010012585,0.632022241256357,11.149886840959,7.60061083019722,4.02754551231165,3.40150721768215,3.17890167650024,1.44234539423963,1.62458479892035,2.3222283488074,2.13379058634,1.31074040677893,1.65678397257579,2.11666051608725,2.68816875017609,6.80191150845634,19.5347638969177,12.7393676385455,33.9126925055438,15.6483571166074,30.4045610230915,16.6667978083211,13.076471123823,4.51414893631827,71.1587321697504,75.0330135506698,80.2053718815155,112.220128070428,72.6187470956881,67.985450765073,51.9767325178491,54.9391867933549,66.6119341206781,61.6134770984666,16.2946135707157,27.5327162646711,20.6587662962502,20.9071776678733,18.8651846365184,22.0612210140017,14.6682840349066,16.0707344646337,19.8969909946925,18.4468964587572,14.9552786935241,14.7128546281139,13.6716600906028,15.173961119954,16.7137214660835,15.7176918123414,18.425607825232,16.5901929598786,21.4284668417719,15.1614887738429,15.7719856097291,14.3755402989063,12.8755542571553,17.4415699958794,17.9748916593281,19.1229013835189,14.8171658026946,13.9426947062057,14.9384525230448,16.2731258780744,17.0834426098811,17.0412754509725,17.187703813127,15.8035578009685,20.0622875420387,37.9712078465678,18.2466654587419,22.1317185669747,21.8068698558481,15.8825821766051,13.216466630364
|short_description=p1@Numbl
}}
}}

Latest revision as of 11:37, 26 September 2015

Short description:p1@Numbl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Numbl_5end
Coexpression cluster:MCL_coexpression_mm9:1683
Association with transcript: 0bp_to_ENSMUST00000132897, ENSMUST00000149805, NM_010950, uc009fvq.1_5end
EntrezGene:Numbl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Numbl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.82
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B795.45
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C257.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B870.52
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C354.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C454.73
Mouse Astrocytes, donor3.CNhs12107.11633-122C4119.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E129.80
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.81
Mouse Granule cells, donor1.CNhs12131.11713-123C342.69
Mouse Granule cells, donor2.CNhs12357.11731-123E349.20
Mouse Granule cells, donor3.CNhs12108.11636-122C766.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C659.64
Mouse Meningeal cells, donor3.CNhs12109.11639-122D168.48
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C842.24
Mouse Microglia, donor2.CNhs12634.11736-123E847.26
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F548.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D952.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.13
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.91
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D672.62
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D352.86
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D733.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D447.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.16
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.08
Mouse Schwann, donor1.CNhs12507.11728-123D938.01
Mouse Schwann, donor2.CNhs12573.11746-123F939.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D710.09
adrenal gland, embryo E14.CNhs11038.406-44C514.40
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C111.05
adrenal gland, neonate N25.CNhs11223.1377-27I38.80
amnion, adult pregnant day17.5.CNhs10488.583-22A820.52
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F519.90
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I224.30
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A428.01
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F134.18
cortex, adult.CNhs10473.12-14D564.84
cortex, neonate N30.CNhs11107.1392-42F260.86
diencephalon, adult.CNhs10482.20-12F224.31
diencephalon, neonate N30.CNhs11201.1388-42B233.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B129.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C69.76
eyeball, embryo E14.CNhs10521.399-16E215.17
eyeball, embryo E15.CNhs10593.426-16C915.67
eyeball, embryo E17.CNhs11023.1261-18D416.28
eyeball, neonate N00.CNhs11207.633-15C621.91
eyeball, neonate N01.CNhs11140.1532-43E716.40
eyeball, neonate N02.CNhs11205.1551-44G825.30
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E211.86
forelimb, embryo E12.CNhs10600.359-14H219.48
forelimb, embryo E13.CNhs10589.384-1E220.06
forelimb, embryo E14.CNhs10577.413-26A825.21
forelimb, embryo E15.CNhs11007.437-20E721.41
forelimb, embryo E17.CNhs10598.1517-43C424.38
forelimb, embryo E18.CNhs11008.1520-43B525.11
gonad, embryo E13.CNhs11044.1564-45I613.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E99.32
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E38.76
heart, neonate N03.CNhs11221.1349-25I29.05
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G17.22
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E860.14
hippocampus, neonate N00.CNhs11228.627-43G131.49
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I512.16
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F89.60
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G711.01
kidney, neonate N10.CNhs11206.758-6D57.34
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G215.54
lung, embryo E14.CNhs10604.404-26F817.60
lung, embryo E15.CNhs11020.432-17C512.56
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A610.72
lung, embryo E18.CNhs10583.1287-20I617.14
lung, neonate N00.CNhs11224.640-42C619.71
lung, neonate N06.CNhs11212.683-20E515.61
lung, neonate N07.CNhs11111.715-19A317.27
lung, neonate N10.CNhs11219.750-23E616.74
lung, neonate N20.CNhs11109.822-18A411.80
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H213.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C214.77
medulla oblongata, neonate N30.CNhs11200.1396-42A317.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I932.13
ovary, adult.CNhs10507.91-2I715.76
ovary, embryo E18.CNhs11040.505-44H729.74
ovary, neonate N00.CNhs11217.1299-22I427.20
oviduct, adult pregnant day01.CNhs10500.988-6G625.57
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F415.54
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C723.93
pituitary gland, embryo E14.CNhs11037.398-44A525.51
pituitary gland, embryo E15.CNhs10592.427-16B924.30
pituitary gland, embryo E16.CNhs11036.449-43F623.54
pituitary gland, embryo E17.CNhs11039.1265-44F529.78
pituitary gland, neonate N00.CNhs11190.1308-22E945.67
placenta, adult pregnant day10.CNhs10472.539-13I739.66
placenta, adult pregnant day17.CNhs10464.577-18G315.46
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G430.68
skin, neonate N03.CNhs11215.662-22H317.31
skin, neonate N06.CNhs11097.693-20I518.03
skin, neonate N10.CNhs11108.762-6C412.15
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C112.38
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E318.66
stomach, embryo E15.CNhs10603.1252-16G815.05
stomach, embryo E16.CNhs11022.459-17D414.69
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C617.03
stomach, neonate N03.CNhs11193.1340-24B813.35
stomach, neonate N07.CNhs11210.718-18A916.45
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C511.91
testis, embryo E16.CNhs11033.470-26G520.03
testis, embryo E17.CNhs11029.486-18I519.12
testis, embryo E18.CNhs11027.503-18G518.92
testis, neonate N00.CNhs11189.1300-22B718.31
testis, neonate N07.CNhs11222.726-26I416.02
testis, neonate N10.CNhs11204.763-44D914.47
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I411.15
thymus, embryo E15.CNhs11005.430-45I27.60
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G533.91
urinary bladder, adult.CNhs10481.879-12E415.65
uterus, adult pregnant day19.CNhs10497.590-15F530.40
uterus, adult.CNhs10509.92-27E516.67
vagina, adult.CNhs10502.89-27D513.08
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A171.16
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A275.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A380.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7112.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A472.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A754.94
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A866.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A961.61
whole body, embryo E11.CNhs11014.324-5I816.29
whole body, embryo E12.CNhs10587.857-27C927.53
whole body, embryo E13.CNhs10512.372-23H220.66
whole body, embryo E14.5.CNhs10578.420-27D220.91
whole body, embryo E14.CNhs10519.395-14B118.87
whole body, embryo E16.CNhs10514.453-14F222.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.80
whole body, embryo E17.5.CNhs10513.490-9F920.06
whole body, embryo E17.CNhs10517.475-3I537.97
whole body, embryo E18.CNhs10516.493-3B318.25
whole body, neonate N00.CNhs10525.657-19C222.13
whole body, neonate N01.CNhs10576.659-23C621.81
whole body, neonate N06.CNhs10515.692-21D115.88
whole body, neonate N10.CNhs10518.761-6B413.22





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.79e-3275
central nervous system7.81e-3173
ectoderm-derived structure2.17e-2995
ectoderm2.17e-2995
presumptive ectoderm2.17e-2995
regional part of nervous system5.16e-2654
neural tube3.09e-2452
neural rod3.09e-2452
future spinal cord3.09e-2452
neural keel3.09e-2452
neurectoderm1.12e-2264
neural plate1.12e-2264
presumptive neural plate1.12e-2264
brain2.83e-2247
future brain2.83e-2247
regional part of brain8.32e-2246
ecto-epithelium1.09e-2173
anterior neural tube3.88e-2040
regional part of forebrain9.45e-2039
forebrain9.45e-2039
future forebrain9.45e-2039
gray matter1.30e-1934
pre-chordal neural plate8.66e-1949
brain grey matter3.58e-1729
regional part of telencephalon3.58e-1729
telencephalon3.58e-1729
structure with developmental contribution from neural crest5.57e-1692
cerebral cortex1.04e-1321
cerebral hemisphere1.04e-1321
pallium1.04e-1321
regional part of cerebral cortex1.86e-1117
tube4.45e-08114
occipital lobe7.55e-0810
visual cortex7.55e-0810
neocortex7.55e-0810
anatomical conduit1.66e-07122
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