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FFCP PHASE1:Mm9::chr4:134708909..134708939,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12399
|EntrezGene=12399
|HGNC=
|HGNC=
|MCL_coexpression_id=698
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=56bp_to_ENSMUST00000156478_5end
|association_with_transcript=56bp_to_ENSMUST00000156478_5end
|cluster_id=chr4:134708909..134708939,+
|description=CAGE_peak_3_at_Runx3_5end
|description=CAGE_peak_3_at_Runx3_5end
|id=chr4:134708909..134708939,+
|id=chr4:134708909..134708939,+
|ontology_enrichment_celltype=CL:0000988!9.08e-15!32;CL:0002032!9.08e-15!32;CL:0000037!9.08e-15!32;CL:0000566!9.08e-15!32;CL:0000837!9.08e-15!32;CL:0002031!6.25e-12!25;CL:0000049!1.04e-08!19;CL:0000838!2.43e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0000542!3.01e-07!13;CL:0000051!3.01e-07!13;CL:0000763!7.23e-07!16;CL:0002320!8.47e-07!46;CL:0000134!8.47e-07!46
|ontology_enrichment_celltype=CL:0000988!9.08e-15!32;CL:0002032!9.08e-15!32;CL:0000037!9.08e-15!32;CL:0000566!9.08e-15!32;CL:0000837!9.08e-15!32;CL:0002031!6.25e-12!25;CL:0000049!1.04e-08!19;CL:0000838!2.43e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0000542!3.01e-07!13;CL:0000051!3.01e-07!13;CL:0000763!7.23e-07!16;CL:0002320!8.47e-07!46;CL:0000134!8.47e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000988,9.72e-22,32;CL:0002032,9.72e-22,32;CL:0000037,9.72e-22,32;CL:0000837,9.72e-22,32;CL:0002031,1.29e-15,25;CL:0000049,3.35e-14,19;CL:0002320,6.47e-13,46;CL:0000134,6.47e-13,46;CL:0000763,1.16e-10,16;CL:0000219,5.48e-10,54;CL:0000838,1.83e-09,12;CL:0000553,2.57e-09,6;CL:0000556,2.57e-09,6;CL:0000738,9.87e-09,17;CL:0002087,9.87e-09,17;CL:0000542,1.45e-08,13;CL:0000051,1.45e-08,13;CL:0000084,3.41e-08,11;CL:0000827,3.41e-08,11;CL:0000839,1.56e-07,13;CL:0000050,1.58e-07,9;CL:0000034,9.61e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.26e-17!48;UBERON:0002390!1.40e-15!45;UBERON:0003061!1.40e-15!45;UBERON:0002405!3.33e-11!70;UBERON:0004177!6.32e-11!29;UBERON:0003081!2.61e-09!88;UBERON:0003408!2.30e-08!24;UBERON:0006562!6.01e-08!24;UBERON:0001557!6.01e-08!24;UBERON:0001042!6.01e-08!24;UBERON:0008814!6.01e-08!24;UBERON:0009145!6.01e-08!24;UBERON:0002370!6.08e-08!23;UBERON:0000974!6.08e-08!23;UBERON:0004807!6.08e-08!23;UBERON:0005058!6.08e-08!23;UBERON:0003351!6.08e-08!23;UBERON:0009113!6.08e-08!23;UBERON:0003295!6.08e-08!23;UBERON:0009722!6.08e-08!23;UBERON:0005562!6.08e-08!23;UBERON:0007690!6.08e-08!23;UBERON:0002384!8.47e-07!46
|ontology_enrichment_uberon=UBERON:0002193!3.26e-17!48;UBERON:0002390!1.40e-15!45;UBERON:0003061!1.40e-15!45;UBERON:0002405!3.33e-11!70;UBERON:0004177!6.32e-11!29;UBERON:0003081!2.61e-09!88;UBERON:0003408!2.30e-08!24;UBERON:0006562!6.01e-08!24;UBERON:0001557!6.01e-08!24;UBERON:0001042!6.01e-08!24;UBERON:0008814!6.01e-08!24;UBERON:0009145!6.01e-08!24;UBERON:0002370!6.08e-08!23;UBERON:0000974!6.08e-08!23;UBERON:0004807!6.08e-08!23;UBERON:0005058!6.08e-08!23;UBERON:0003351!6.08e-08!23;UBERON:0009113!6.08e-08!23;UBERON:0003295!6.08e-08!23;UBERON:0009722!6.08e-08!23;UBERON:0005562!6.08e-08!23;UBERON:0007690!6.08e-08!23;UBERON:0002384!8.47e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.43e-21,48;UBERON:0002405,1.43e-21,48;UBERON:0002390,1.03e-18,45;UBERON:0003061,1.03e-18,45;UBERON:0002384,6.47e-13,46;UBERON:0004177,1.36e-10,29;UBERON:0005057,1.36e-10,29;UBERON:0003408,1.01e-09,24;UBERON:0003081,2.71e-09,87;UBERON:0002371,4.56e-09,16;UBERON:0002370,5.54e-09,23;UBERON:0000974,5.54e-09,23;UBERON:0004807,5.54e-09,23;UBERON:0005058,5.54e-09,23;UBERON:0003351,5.54e-09,23;UBERON:0009113,5.54e-09,23;UBERON:0003295,5.54e-09,23;UBERON:0009722,5.54e-09,23;UBERON:0005562,5.54e-09,23;UBERON:0007690,5.54e-09,23;UBERON:0002204,1.12e-08,32;UBERON:0000926,1.19e-08,120;UBERON:0004120,1.19e-08,120;UBERON:0006603,1.19e-08,120;UBERON:0006562,1.84e-08,24;UBERON:0001557,1.84e-08,24;UBERON:0001042,1.84e-08,24;UBERON:0008814,1.84e-08,24;UBERON:0009145,1.84e-08,24;UBERON:0001474,2.82e-08,22;UBERON:0004765,2.82e-08,22;UBERON:0001434,2.82e-08,22;UBERON:0000077,5.36e-08,35;UBERON:0000072,3.89e-07,27
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.985521055061667,2.57470978954193,0.856089841127525,0.8774937489487,11.641649635322,9.35398305883272,1.66554880907831,4.04950534779652,2.09868563438444,13.5648731104042,16.3166175990829,15.2780274647291,0.765389611359628,2.18440092641948,2.35079810225042,1.11994695955385,1.14704640533585,0,0,0,0,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0,0,0,2.92972141515835,3.906676722619,1.57057123192139,4.1176204162171,8.19654581950135,3.39857247121808,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,5.20126078778983,6.5282592781021,5.04140698713696,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,2.09720077362883,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,30.5546702703663,1.1875371125186,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,1.01219549843938,0.884610551949874,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,1.27728527604296,3.35482348616577,3.59941638596045,4.06624726633807,0,0,0,0,0,0,0,0,1.61729061793121,0.505445516867349,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,2.80885274925294,2.83082697826187,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0,0,0,0,2.03228509183265,0,0,0.169745085775188,0,0,0,0.390267295715598,0.630540576424764,0,0.637819074629948,0.983179888294428,1.20879487306127,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.989820737835213,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0.661585194164886,1.15420377059036,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,0,8.37267315909478,0.82554747185289,0.925972636848558,0.941842285023455,6.69801715833023,4.80434163733698,3.0596117398894,4.19854356970974,4.42239916174156,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,7.89170114157866,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0.724752362478018,1.72818003754719,2.21207784439725,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,2.18549490259391,2.16351809135944,2.06765338044408,1.51449674922221,2.13379058634,2.11734988787365,2.92373642219257,3.2712026157712,3.27255326108393,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,1.68342681497322,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0.661774257358546,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.985521055061667,2.57470978954193,0.856089841127525,0.8774937489487,11.641649635322,9.35398305883272,1.66554880907831,4.04950534779652,2.09868563438444,13.5648731104042,16.3166175990829,15.2780274647291,0.765389611359628,2.18440092641948,2.35079810225042,1.11994695955385,1.14704640533585,0,0,0,0,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0,0,0,2.92972141515835,3.906676722619,1.57057123192139,4.1176204162171,8.19654581950135,3.39857247121808,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,5.20126078778983,6.5282592781021,5.04140698713696,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,2.09720077362883,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,30.5546702703663,1.1875371125186,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,1.01219549843938,0.884610551949874,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,1.27728527604296,3.35482348616577,3.59941638596045,4.06624726633807,0,0,0,0,0,0,0,0,1.61729061793121,0.505445516867349,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,2.80885274925294,2.83082697826187,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0,0,0,0,2.03228509183265,0,0,0.169745085775188,0,0,0,0.390267295715598,0.630540576424764,0,0.637819074629948,0.983179888294428,1.20879487306127,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.989820737835213,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0.661585194164886,1.15420377059036,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,0,8.37267315909478,0.82554747185289,0.925972636848558,0.941842285023455,6.69801715833023,4.80434163733698,3.0596117398894,4.19854356970974,4.42239916174156,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,7.89170114157866,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0.724752362478018,1.72818003754719,2.21207784439725,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,2.18549490259391,2.16351809135944,2.06765338044408,1.51449674922221,2.13379058634,2.11734988787365,2.92373642219257,3.2712026157712,3.27255326108393,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,1.68342681497322,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0.661774257358546,0.695603506861264
|short_description=p3@Runx3
|short_description=p3@Runx3
}}
}}

Latest revision as of 12:29, 26 September 2015

Short description:p3@Runx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Runx3_5end
Coexpression cluster:MCL_coexpression_mm9:698
Association with transcript: 56bp_to_ENSMUST00000156478_5end
EntrezGene:Runx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Runx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.64
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H930.55
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.07
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G28.37
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.43e-2148
immune system1.43e-2148
hematopoietic system1.03e-1845
blood island1.03e-1845
connective tissue6.47e-1346
hemopoietic organ1.36e-1029
immune organ1.36e-1029
gland of gut1.01e-0924
lateral plate mesoderm2.71e-0987
bone marrow4.56e-0916
thymus5.54e-0923
neck5.54e-0923
respiratory system epithelium5.54e-0923
hemolymphoid system gland5.54e-0923
pharyngeal epithelium5.54e-0923
thymic region5.54e-0923
pharyngeal gland5.54e-0923
entire pharyngeal arch endoderm5.54e-0923
thymus primordium5.54e-0923
early pharyngeal endoderm5.54e-0923
musculoskeletal system1.12e-0832
mesoderm1.19e-08120
mesoderm-derived structure1.19e-08120
presumptive mesoderm1.19e-08120
pharynx1.84e-0824
upper respiratory tract1.84e-0824
chordate pharynx1.84e-0824
pharyngeal arch system1.84e-0824
pharyngeal region of foregut1.84e-0824
bone element2.82e-0822
skeletal element2.82e-0822
skeletal system2.82e-0822
mixed endoderm/mesoderm-derived structure5.36e-0835
segment of respiratory tract3.89e-0727
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