FFCP PHASE1:Mm9::chr10:92798965..92798984,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=432488 | |EntrezGene=432488 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_038014,uc007gup.1_5end | |association_with_transcript=0bp_to_NR_038014,uc007gup.1_5end | ||
|cluster_id=chr10:92798965..92798984,+ | |||
|description=CAGE_peak_1_at_Gm17745_5end | |description=CAGE_peak_1_at_Gm17745_5end | ||
|id=chr10:92798965..92798984,+ | |id=chr10:92798965..92798984,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,9.43e-15,19;CL:0000988,2.00e-10,32;CL:0002032,2.00e-10,32;CL:0000037,2.00e-10,32;CL:0000837,2.00e-10,32;CL:0000763,1.00e-09,16;CL:0002320,2.78e-08,46;CL:0000134,2.78e-08,46;CL:0000557,5.28e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.85e-08,3;DOID:4045,9.85e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.45e-13!48;UBERON:0002390!4.30e-12!45;UBERON:0003061!4.30e-12!45;UBERON:0002405!9.22e-10!70;UBERON:0003081!8.67e-09!88;UBERON:0004177!3.54e-08!29;UBERON:0000926!7.79e-08!193;UBERON:0004120!7.79e-08!193;UBERON:0006603!7.79e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.53e-19,48;UBERON:0002405,3.53e-19,48;UBERON:0002390,1.10e-18,45;UBERON:0003061,1.10e-18,45;UBERON:0002204,4.02e-12,32;UBERON:0002371,7.50e-12,16;UBERON:0001474,9.38e-12,22;UBERON:0004765,9.38e-12,22;UBERON:0001434,9.38e-12,22;UBERON:0003081,9.90e-11,87;UBERON:0000926,2.23e-09,120;UBERON:0004120,2.23e-09,120;UBERON:0006603,2.23e-09,120;UBERON:0004177,1.45e-08,29;UBERON:0005057,1.45e-08,29;UBERON:0002384,2.78e-08,46;UBERON:0002106,3.41e-08,6;UBERON:0004457,3.41e-08,6;UBERON:0000042,3.41e-08,6;UBERON:0004854,3.41e-08,6;UBERON:0009034,3.41e-08,6;UBERON:0002095,3.41e-08,6;UBERON:0004782,3.41e-08,6;UBERON:0003281,3.41e-08,6;UBERON:0009664,3.41e-08,6;UBERON:0002296,3.41e-08,6;UBERON:0005602,3.41e-08,6;UBERON:0001179,3.41e-08,6;UBERON:0006293,3.41e-08,6;UBERON:0000077,9.61e-08,35 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.437102012094987,0.333109761815663,1.41732687172878,0,3.78554598429885,2.60517423850904,2.54633791078818,0.340173160604279,0,0,0.159992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,3.1253413780952,3.14114246384279,1.17646297606203,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,2.01339127269284,0.725362142011344,0.336093799142464,0,0.85960031981627,0,0,0,0.633831403506179,0,0,0,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0,0.227178579999552,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.76813650941515,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.86759614151947,0.884610551949874,0.323533699894818,1.54589062922275,2.90925151881133,0,0,0,0.510914110417183,4.79260498023681,2.99951365496704,4.19331749341113,0,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,1.7416975885413,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0.556094498451196,0,0,0,4.21327912387941,4.88961023517959,3.12579849335152,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0.878200461164203,0.402619256281115,0,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.795825888164603,0.779856348476481,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.379419222745544,0.590440591918409,0.627994911365499,0.246794327843601,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0.287696137450811,0.972811360650212,0,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,1.29327233116623,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,1.80249646187312,0.345369963731791,1.01254341007058,1.50791283939272,2.71952841909355,0,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.493647061806363,0,0.938686832254841,0,0.220528398054962,0.98931751764888,0.322928853391811,0.241251699712623,0,0,0,0,1.53783792718067,1.44470807574256,1.85194527369712,1.69531611304222,1.6403307326523,0.915112692826091,1.35982743995084,1.39951452323658,2.3493995546752,0.954670618015114,0,0,0,0.627264888043406,0.436725127492355,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0.576060012515731,0.948033361884535,1.01362607645082,1.74608627180206,1.68897069871134,1.07416017400489,0.596044064343795,1.32214994471966,1.62458479892035,0.706765149637033,1.905170166375,0.907435666231565,0.974578807397524,1.53938946624527,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,1.50145980360946,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.57386499620653,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.437102012094987,0.333109761815663,1.41732687172878,0,3.78554598429885,2.60517423850904,2.54633791078818,0.340173160604279,0,0,0.159992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,3.1253413780952,3.14114246384279,1.17646297606203,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,2.01339127269284,0.725362142011344,0.336093799142464,0,0.85960031981627,0,0,0,0.633831403506179,0,0,0,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0,0.227178579999552,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.76813650941515,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.86759614151947,0.884610551949874,0.323533699894818,1.54589062922275,2.90925151881133,0,0,0,0.510914110417183,4.79260498023681,2.99951365496704,4.19331749341113,0,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,1.7416975885413,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0.556094498451196,0,0,0,4.21327912387941,4.88961023517959,3.12579849335152,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0.878200461164203,0.402619256281115,0,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.795825888164603,0.779856348476481,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.379419222745544,0.590440591918409,0.627994911365499,0.246794327843601,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0.287696137450811,0.972811360650212,0,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,1.29327233116623,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,1.80249646187312,0.345369963731791,1.01254341007058,1.50791283939272,2.71952841909355,0,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.493647061806363,0,0.938686832254841,0,0.220528398054962,0.98931751764888,0.322928853391811,0.241251699712623,0,0,0,0,1.53783792718067,1.44470807574256,1.85194527369712,1.69531611304222,1.6403307326523,0.915112692826091,1.35982743995084,1.39951452323658,2.3493995546752,0.954670618015114,0,0,0,0.627264888043406,0.436725127492355,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0.576060012515731,0.948033361884535,1.01362607645082,1.74608627180206,1.68897069871134,1.07416017400489,0.596044064343795,1.32214994471966,1.62458479892035,0.706765149637033,1.905170166375,0.907435666231565,0.974578807397524,1.53938946624527,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,1.50145980360946,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.57386499620653,0.441182838239031,0.463735671240843 | ||
|short_description=p1@Gm17745 | |short_description=p1@Gm17745 | ||
}} | }} |
Latest revision as of 14:26, 26 September 2015
Short description: | p1@Gm17745 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm17745_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_NR_038014, uc007gup.1_5end |
EntrezGene: | Gm17745 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 9.43e-15 | 19 |
hematopoietic cell | 2.00e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.00e-10 | 32 |
hematopoietic stem cell | 2.00e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.00e-10 | 32 |
myeloid cell | 1.00e-09 | 16 |
connective tissue cell | 2.78e-08 | 46 |
mesenchymal cell | 2.78e-08 | 46 |
granulocyte monocyte progenitor cell | 5.28e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.53e-19 | 48 |
immune system | 3.53e-19 | 48 |
hematopoietic system | 1.10e-18 | 45 |
blood island | 1.10e-18 | 45 |
musculoskeletal system | 4.02e-12 | 32 |
bone marrow | 7.50e-12 | 16 |
bone element | 9.38e-12 | 22 |
skeletal element | 9.38e-12 | 22 |
skeletal system | 9.38e-12 | 22 |
lateral plate mesoderm | 9.90e-11 | 87 |
mesoderm | 2.23e-09 | 120 |
mesoderm-derived structure | 2.23e-09 | 120 |
presumptive mesoderm | 2.23e-09 | 120 |
hemopoietic organ | 1.45e-08 | 29 |
immune organ | 1.45e-08 | 29 |
connective tissue | 2.78e-08 | 46 |
spleen | 3.41e-08 | 6 |
cavity lining | 3.41e-08 | 6 |
serous membrane | 3.41e-08 | 6 |
gastrointestinal system mesentery | 3.41e-08 | 6 |
stomach region | 3.41e-08 | 6 |
mesentery | 3.41e-08 | 6 |
gastrointestinal system serosa | 3.41e-08 | 6 |
mesentery of stomach | 3.41e-08 | 6 |
gut mesentery | 3.41e-08 | 6 |
dorsal mesentery | 3.41e-08 | 6 |
dorsal mesogastrium | 3.41e-08 | 6 |
peritoneal cavity | 3.41e-08 | 6 |
spleen primordium | 3.41e-08 | 6 |
mixed endoderm/mesoderm-derived structure | 9.61e-08 | 35 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.85e-08 | 3 |
muscle cancer | 9.85e-08 | 3 |