FFCP PHASE1:Mm9::chr12:38607287..38607315,+: Difference between revisions
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{{FFCP|EntrezGene=217480|HGNC=|MCL_coexpression_id=90|UniProt=Q6NS52,F8WII9,Q8BUN1,E9PZM3|association_with_transcript=0bp_to_ENSMUST00000040500,ENSMUST00000072865,ENSMUST00000164124,ENSMUST00000170871,NM_178681,uc007nkk.1,uc007nkl.1_5end|description=CAGE_peak_5_at_Dgkb_5end|id=chr12:38607287..38607315,+|ontology_enrichment_celltype=CL:0000540!4.93e-08!33;CL:0000047!4.93e-08!33;CL:0000031!4.93e-08!33;CL:0000404!4.93e-08!33;CL:0000117!7.69e-08!23;CL:0000337!7.69e-08!23|ontology_enrichment_celltype_v019_2=CL:0002614,2.52e-07,3;CL:0002610,5.32e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.44e-18!73;UBERON:0005743!1.44e-18!73;UBERON:0000073!2.12e-17!75;UBERON:0001016!2.12e-17!75;UBERON:0001049!6.11e-17!52;UBERON:0005068!6.11e-17!52;UBERON:0006241!6.11e-17!52;UBERON:0007135!6.11e-17!52;UBERON:0002346!2.11e-16!71;UBERON:0003075!2.11e-16!71;UBERON:0007284!2.11e-16!71;UBERON:0000955!2.43e-16!50;UBERON:0006238!2.43e-16!50;UBERON:0002616!1.36e-15!49;UBERON:0004121!1.80e-15!102;UBERON:0000924!1.80e-15!102;UBERON:0006601!1.80e-15!102;UBERON:0000033!7.47e-15!63;UBERON:0002020!8.16e-14!34;UBERON:0003080!6.91e-13!40;UBERON:0002780!2.96e-12!39;UBERON:0001890!2.96e-12!39;UBERON:0006240!2.96e-12!39;UBERON:0003056!5.86e-12!49;UBERON:0002791!2.90e-11!29;UBERON:0003528!2.90e-11!29;UBERON:0001893!2.90e-11!29;UBERON:0002021!5.51e-09!10;UBERON:0000411!5.51e-09!10;UBERON:0001950!5.51e-09!10;UBERON:0000956!2.39e-08!21;UBERON:0001869!2.39e-08!21;UBERON:0000203!2.39e-08!21;UBERON:0002619!1.32e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0001049,6.76e-27,52;UBERON:0005068,6.76e-27,52;UBERON:0006241,6.76e-27,52;UBERON:0007135,6.76e-27,52;UBERON:0002020,6.71e-26,34;UBERON:0001017,4.42e-24,73;UBERON:0000955,6.70e-24,47;UBERON:0006238,6.70e-24,47;UBERON:0001016,3.03e-23,75;UBERON:0002021,5.50e-23,10;UBERON:0000411,5.50e-23,10;UBERON:0001950,5.50e-23,10;UBERON:0003528,8.08e-23,29;UBERON:0002791,8.08e-23,29;UBERON:0001893,8.08e-23,29;UBERON:0002616,3.68e-22,46;UBERON:0003080,9.78e-22,40;UBERON:0002346,1.28e-20,64;UBERON:0003075,1.28e-20,64;UBERON:0007284,1.28e-20,64;UBERON:0002780,3.51e-20,39;UBERON:0001890,3.51e-20,39;UBERON:0006240,3.51e-20,39;UBERON:0002619,2.98e-18,17;UBERON:0010371,2.88e-17,73;UBERON:0000956,5.27e-17,21;UBERON:0001869,5.27e-17,21;UBERON:0000203,5.27e-17,21;UBERON:0004121,8.00e-17,95;UBERON:0000924,8.00e-17,95;UBERON:0006601,8.00e-17,95;UBERON:0003056,9.17e-17,49;UBERON:0010314,2.34e-12,92;UBERON:0000025,1.64e-11,114;UBERON:0004111,2.67e-10,122;UBERON:0002950,3.16e-09,4;UBERON:0001891,3.16e-09,4;UBERON:0009616,3.16e-09,4;UBERON:0010286,3.16e-09,4;UBERON:0011216,1.14e-07,194;UBERON:0002038,2.52e-07,3;UBERON:0009663,2.52e-07,3;UBERON:0009661,2.52e-07,3;UBERON:0000125,2.52e-07,3;UBERON:0002308,2.52e-07,3;UBERON:0004684,5.32e-07,3;UBERON:0002275,5.32e-07,3;UBERON:0002420,6.09e-07,8;UBERON:0007245,6.09e-07,8;UBERON:0010009,6.09e-07,8;UBERON:0010011,6.09e-07,8;UBERON:0000454,6.09e-07,8|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.210324961351382,1.14260393761521,0.662605622854841,0.857435594504678,0.287536413054709,0,1.10115880999389,4.08599481872601,3.5329502648936,0.527545150920775,0.457438218012048,0,1.95428099300967,5.06486349028512,5.80633341551878,2.94628585473668,2.42031857358475,0.559198337475902,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.753613202763113,0.587943535678524,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,0.83778682725382,0.510914110417183,0,0,0,2.99581278809645,58.1025765579656,1.38219787324151,17.3824320192276,10.9957646652042,6.85700547046548,22.064811777215,0.203678727700633,0,0,0,0,0,0.720248519221397,0.150704817835715,0.408218994907967,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,15.1408762966172,1.44066457330998,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.38992817423824,0,0.648414149624083,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,0.476087281772027,0.975668239288994,1.10344600874334,2.21464689648775,0.797273843287435,0,0,0,0,0,0,0.275936746304732,2.0871576698413,2.34423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,12.5315313404505,0.283880170416537,0,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,2.03967832211561,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,4.51801474093653,11.9684561491866,6.30185064783336,7.21783365843488,10.2762377965596,12.0863023582352,7.42524750254986,11.2580300806055,9.06284817968409,8.80192529978094,0,0.399024873401031,0.341467211508268,0.972426868273176,0,0,0.888986911206461,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.448176066834085,0.516919220600519,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.941093804153306,0.761531471025089,0.548783918618318,0.789209134313529,0.679020569229309,0,0.237270036248348,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0|short_description=p5@Dgkb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217480 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NS52,F8WII9,Q8BUN1,E9PZM3 | |||
|association_with_transcript=0bp_to_ENSMUST00000040500,ENSMUST00000072865,ENSMUST00000164124,ENSMUST00000170871,NM_178681,uc007nkk.1,uc007nkl.1_5end | |||
|cluster_id=chr12:38607287..38607315,+ | |||
|description=CAGE_peak_5_at_Dgkb_5end | |||
|id=chr12:38607287..38607315,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.93e-08!33;CL:0000047!4.93e-08!33;CL:0000031!4.93e-08!33;CL:0000404!4.93e-08!33;CL:0000117!7.69e-08!23;CL:0000337!7.69e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.52e-07,3;CL:0002610,5.32e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-18!73;UBERON:0005743!1.44e-18!73;UBERON:0000073!2.12e-17!75;UBERON:0001016!2.12e-17!75;UBERON:0001049!6.11e-17!52;UBERON:0005068!6.11e-17!52;UBERON:0006241!6.11e-17!52;UBERON:0007135!6.11e-17!52;UBERON:0002346!2.11e-16!71;UBERON:0003075!2.11e-16!71;UBERON:0007284!2.11e-16!71;UBERON:0000955!2.43e-16!50;UBERON:0006238!2.43e-16!50;UBERON:0002616!1.36e-15!49;UBERON:0004121!1.80e-15!102;UBERON:0000924!1.80e-15!102;UBERON:0006601!1.80e-15!102;UBERON:0000033!7.47e-15!63;UBERON:0002020!8.16e-14!34;UBERON:0003080!6.91e-13!40;UBERON:0002780!2.96e-12!39;UBERON:0001890!2.96e-12!39;UBERON:0006240!2.96e-12!39;UBERON:0003056!5.86e-12!49;UBERON:0002791!2.90e-11!29;UBERON:0003528!2.90e-11!29;UBERON:0001893!2.90e-11!29;UBERON:0002021!5.51e-09!10;UBERON:0000411!5.51e-09!10;UBERON:0001950!5.51e-09!10;UBERON:0000956!2.39e-08!21;UBERON:0001869!2.39e-08!21;UBERON:0000203!2.39e-08!21;UBERON:0002619!1.32e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0001049,6.76e-27,52;UBERON:0005068,6.76e-27,52;UBERON:0006241,6.76e-27,52;UBERON:0007135,6.76e-27,52;UBERON:0002020,6.71e-26,34;UBERON:0001017,4.42e-24,73;UBERON:0000955,6.70e-24,47;UBERON:0006238,6.70e-24,47;UBERON:0001016,3.03e-23,75;UBERON:0002021,5.50e-23,10;UBERON:0000411,5.50e-23,10;UBERON:0001950,5.50e-23,10;UBERON:0003528,8.08e-23,29;UBERON:0002791,8.08e-23,29;UBERON:0001893,8.08e-23,29;UBERON:0002616,3.68e-22,46;UBERON:0003080,9.78e-22,40;UBERON:0002346,1.28e-20,64;UBERON:0003075,1.28e-20,64;UBERON:0007284,1.28e-20,64;UBERON:0002780,3.51e-20,39;UBERON:0001890,3.51e-20,39;UBERON:0006240,3.51e-20,39;UBERON:0002619,2.98e-18,17;UBERON:0010371,2.88e-17,73;UBERON:0000956,5.27e-17,21;UBERON:0001869,5.27e-17,21;UBERON:0000203,5.27e-17,21;UBERON:0004121,8.00e-17,95;UBERON:0000924,8.00e-17,95;UBERON:0006601,8.00e-17,95;UBERON:0003056,9.17e-17,49;UBERON:0010314,2.34e-12,92;UBERON:0000025,1.64e-11,114;UBERON:0004111,2.67e-10,122;UBERON:0002950,3.16e-09,4;UBERON:0001891,3.16e-09,4;UBERON:0009616,3.16e-09,4;UBERON:0010286,3.16e-09,4;UBERON:0011216,1.14e-07,194;UBERON:0002038,2.52e-07,3;UBERON:0009663,2.52e-07,3;UBERON:0009661,2.52e-07,3;UBERON:0000125,2.52e-07,3;UBERON:0002308,2.52e-07,3;UBERON:0004684,5.32e-07,3;UBERON:0002275,5.32e-07,3;UBERON:0002420,6.09e-07,8;UBERON:0007245,6.09e-07,8;UBERON:0010009,6.09e-07,8;UBERON:0010011,6.09e-07,8;UBERON:0000454,6.09e-07,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.210324961351382,1.14260393761521,0.662605622854841,0.857435594504678,0.287536413054709,0,1.10115880999389,4.08599481872601,3.5329502648936,0.527545150920775,0.457438218012048,0,1.95428099300967,5.06486349028512,5.80633341551878,2.94628585473668,2.42031857358475,0.559198337475902,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.753613202763113,0.587943535678524,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,0.83778682725382,0.510914110417183,0,0,0,2.99581278809645,58.1025765579656,1.38219787324151,17.3824320192276,10.9957646652042,6.85700547046548,22.064811777215,0.203678727700633,0,0,0,0,0,0.720248519221397,0.150704817835715,0.408218994907967,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,15.1408762966172,1.44066457330998,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.38992817423824,0,0.648414149624083,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,0.476087281772027,0.975668239288994,1.10344600874334,2.21464689648775,0.797273843287435,0,0,0,0,0,0,0.275936746304732,2.0871576698413,2.34423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,12.5315313404505,0.283880170416537,0,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,2.03967832211561,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,4.51801474093653,11.9684561491866,6.30185064783336,7.21783365843488,10.2762377965596,12.0863023582352,7.42524750254986,11.2580300806055,9.06284817968409,8.80192529978094,0,0.399024873401031,0.341467211508268,0.972426868273176,0,0,0.888986911206461,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.448176066834085,0.516919220600519,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.941093804153306,0.761531471025089,0.548783918618318,0.789209134313529,0.679020569229309,0,0.237270036248348,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0 | |||
|short_description=p5@Dgkb | |||
}} |
Latest revision as of 14:28, 26 September 2015
Short description: | p5@Dgkb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dgkb_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 0bp_to_ENSMUST00000040500, ENSMUST00000072865, ENSMUST00000164124, ENSMUST00000170871, NM_178681, uc007nkk.1, uc007nkl.1_5end |
EntrezGene: | Dgkb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.52e-07 | 3 |
raphe nuclei neuron | 5.32e-07 | 3 |