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FFCP PHASE1:Mm9::chr12:41172637..41172686,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:41172637..41172686,+
|DHSsupport=NA
|short_description=p1@Dock4
|DPIdataset=NA
|description=CAGE_peak_1_at_Dock4_5end
|association_with_transcript=0bp_to_ENSMUST00000037488,NM_172803,uc007nlc.1,uc007nld.1,uc007nle.1,uc007nlf.1,uc007nlg.1,uc007nlh.1,uc007nlk.2_5end
|EntrezGene=238130
|EntrezGene=238130
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P59764,Q8BMP2
|UniProt=P59764,Q8BMP2
|association_with_transcript=0bp_to_ENSMUST00000037488,NM_172803,uc007nlc.1,uc007nld.1,uc007nle.1,uc007nlf.1,uc007nlg.1,uc007nlh.1,uc007nlk.2_5end
|cluster_id=chr12:41172637..41172686,+
|description=CAGE_peak_1_at_Dock4_5end
|id=chr12:41172637..41172686,+
|ontology_enrichment_celltype=CL:0000117!6.50e-07!23;CL:0000337!6.50e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.46e-07,23;CL:0000337,6.46e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!2.12e-18!114;UBERON:0004111!3.59e-16!122;UBERON:0000955!5.40e-12!50;UBERON:0006238!5.40e-12!50;UBERON:0001049!6.72e-12!52;UBERON:0005068!6.72e-12!52;UBERON:0006241!6.72e-12!52;UBERON:0007135!6.72e-12!52;UBERON:0002616!1.12e-11!49;UBERON:0002020!3.10e-11!34;UBERON:0002791!3.04e-10!29;UBERON:0003528!3.04e-10!29;UBERON:0001893!3.04e-10!29;UBERON:0002346!8.99e-10!71;UBERON:0003075!8.99e-10!71;UBERON:0007284!8.99e-10!71;UBERON:0000033!1.19e-09!63;UBERON:0001017!1.48e-09!73;UBERON:0005743!1.48e-09!73;UBERON:0003080!1.75e-09!40;UBERON:0000468!3.28e-09!333;UBERON:0002780!4.55e-09!39;UBERON:0001890!4.55e-09!39;UBERON:0006240!4.55e-09!39;UBERON:0000479!7.45e-09!349;UBERON:0000073!9.78e-09!75;UBERON:0001016!9.78e-09!75;UBERON:0003056!1.66e-08!49;UBERON:0002048!1.86e-08!14;UBERON:0000117!1.86e-08!14;UBERON:0000171!1.86e-08!14;UBERON:0000170!1.86e-08!14;UBERON:0005597!1.86e-08!14;UBERON:0000118!1.86e-08!14;UBERON:0000475!4.72e-08!200;UBERON:0002021!2.88e-07!10;UBERON:0000411!2.88e-07!10;UBERON:0001950!2.88e-07!10;UBERON:0004121!3.19e-07!102;UBERON:0000924!3.19e-07!102;UBERON:0006601!3.19e-07!102;UBERON:0000922!7.55e-07!328;UBERON:0000956!9.30e-07!21;UBERON:0001869!9.30e-07!21;UBERON:0000203!9.30e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.26e-18,114;UBERON:0004111,3.81e-16,122;UBERON:0000073,8.23e-13,54;UBERON:0001049,6.65e-12,52;UBERON:0005068,6.65e-12,52;UBERON:0006241,6.65e-12,52;UBERON:0007135,6.65e-12,52;UBERON:0002020,3.07e-11,34;UBERON:0000955,9.68e-11,47;UBERON:0006238,9.68e-11,47;UBERON:0002616,1.96e-10,46;UBERON:0003528,3.02e-10,29;UBERON:0002791,3.02e-10,29;UBERON:0001893,3.02e-10,29;UBERON:0002346,4.98e-10,64;UBERON:0003075,4.98e-10,64;UBERON:0007284,4.98e-10,64;UBERON:0001017,1.37e-09,73;UBERON:0003080,1.73e-09,40;UBERON:0010371,3.64e-09,73;UBERON:0010314,4.52e-09,92;UBERON:0002780,4.52e-09,39;UBERON:0001890,4.52e-09,39;UBERON:0006240,4.52e-09,39;UBERON:0000479,6.93e-09,349;UBERON:0001016,9.13e-09,75;UBERON:0003056,1.65e-08,49;UBERON:0002048,1.85e-08,14;UBERON:0000117,1.85e-08,14;UBERON:0000171,1.85e-08,14;UBERON:0000170,1.85e-08,14;UBERON:0005597,1.85e-08,14;UBERON:0000118,1.85e-08,14;UBERON:0002021,2.86e-07,10;UBERON:0000411,2.86e-07,10;UBERON:0001950,2.86e-07,10;UBERON:0004121,3.31e-07,95;UBERON:0000924,3.31e-07,95;UBERON:0006601,3.31e-07,95;UBERON:0000956,9.26e-07,21;UBERON:0001869,9.26e-07,21;UBERON:0000203,9.26e-07,21
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6,10.579642332843,7.32916637555283,2.07383957266869,3.10669656543463,0,14.9516546043979,13.2366792365678,12.055973677331,16.0158181112387,13.3475339137715,15.1390837853023,7.42164993610516,4.08951443260272,2.17425708743405,1.72818003754719,1.26404448251271,3.24360344464263,2.36235201479103,2.33857481360031,2.14832034800978,2.18549490259391,1.80293174279953,1.9199638532695,2.22126189885925,1.37172251979,2.31900225814733,1.94915761479505,2.50150788264857,3.50630706544707,8.38902419376282,0,0,0.167884616364078,9.46629010757733,8.82107634620555,8.97442958909599,7.71726164684637,6.52043735245972,55.3456805764725,50.6357760157895,51.5605962095457,56.8834033557606,49.3259414234862,43.8128460486026,42.5264175146038,41.8798718998525,52.1113770331835,41.4208249401456,5.91587881229807,15.1629451892392,16.0489589408886,13.1277627216879,6.91723436672342,8.27295788025063,18.4464784075341,18.3371200942616,15.7250412699989,16.172621552883,12.1670063947315,19.4285131627658,16.3872638072294,18.0550929781731,18.1496081899738,21.4332161077383,15.7602683285003,21.605832691935,18.5438655361488,17.3694725758589,14.057639347802,14.9079677173843,16.2136609164178,19.476419828732,18.9159854634815,19.1229013835189,17.0123014771678,15.5211129748327,15.75327720612,18.5176949647054,16.7275375555086,17.4352933804747,17.187703813127,17.5078630540142,15.046715656529,10.7418548513317,13.3341016813883,11.3881658645598,10.9034349279241,14.7796250810075,17.3900876715316
|phase1_expression=7.52699581392532,2.09385244583617,1.81999695755814,0.90739263392049,2.00358291978539,3.02182689441402,2.10251376535973,3.09895976259783,4.36445038670167,6.78787126333781,0.34243593645101,0.398860794976682,2.56801094896809,2.71003247498892,8.66085380720723,5.06188168474565,5.59649502502517,2.68142840554502,3.42786084014347,4.66828616977833,21.3458658279185,0.0992909512008853,0,1.27993938234725,0.45881856213434,0.57423196411502,1.7230479846363,0.861884930743556,0.380046838912748,0.756090389279792,0.886922042621219,0,0,15.8481681015439,3.75507105676657,3.32469290716985,4.90006455029686,1.25559489221072,4.6880120671428,3.66466620781659,0,1.36609096991689,0.485510353031154,12.5896817975577,16.9299475136589,7.15832333430558,3.9119567217402,5.23260375313072,3.51497892375155,4.6663175777828,3.3596741190087,0,0.335565212115473,0.725362142011344,2.35265659399725,4.88792928468299,4.29800159908135,10.3134418455488,20.8385954685386,26.4495489636016,20.2826049121977,3.04960078862219,0.889294796111139,11.2487464660175,10.8775299882367,17.7620028736525,5.39280198933128,8.06858441175265,13.6870288247191,11.0704869431986,10.7265730289205,15.7108041422092,9.93908434282261,18.3736198822431,16.6771119571731,12.8690630125403,19.82085857989,36.2632040161933,34.8686830491673,30.597618753405,23.6038120494217,26.5665818983948,18.4260779340911,39.9561453122493,44.1586936074981,21.8025153250514,23.9184423742493,25.9095229697168,3.63485727999283,3.55186332501892,66.9586968900876,34.4169550792555,7.47968467078526,15.1116893658589,37.6870322119648,23.7454250161588,12.2186645514624,9.20323741921512,9.09251016110041,10.9535268098205,5.91542363062058,21.815501160434,5.09610479413291,14.2213340630666,3.46385665617943,2.53359865475099,4.04419556011827,10.6191008138726,8.54495016035667,15.8833088799362,6.41895709034703,9.43842982767638,11.5307748628029,11.3041980414467,16.8151851204058,9.04799457573663,1.97755974187499,12.5801440520323,5.30766331169925,14.3972496453194,17.4464799583711,17.455509112868,3.72783522436244,85.4919927273718,95.9265917205624,5.10914110417183,2.27648736561249,1.79970819298022,2.54140454146129,28.6100121263211,43.9200578705881,30.4083532113132,44.4990259692228,48.0745059781021,31.9993588621723,39.1001443993296,8.24898847187562,11.9430691785689,13.3943061969848,5.89237196482127,9.36867189331467,7.58676944630461,8.64298223065676,13.4127287873786,15.2401758098974,14.3487366719032,12.6497328155634,9.57202471734358,7.76044774558232,13.2374256117473,13.5482365606241,7.45265490253754,17.5169767012127,15.6713474934975,18.7261744131229,28.660934421863,0,0.257347907114715,1.13665399758237,5.38527008592305,7.27030785941398,10.6236616261999,8.04932100989715,10.4285042826124,9.56456099901745,7.90615412151387,13.1453966685813,12.37712629092,12.8356682932515,20.3567655458078,20.5914776246474,19.8831982898452,23.2723122208514,20.3993756515765,105.565554179192,31.0771929385439,4.62586296177317,1.32225283331772,8.53153002140936,10.6828869055802,7.60318021800351,7.26060688644033,4.44756087689741,5.70676878337677,4.2707615539006,3.95277491337626,8.79673230800943,8.95304124185179,11.307917052909,4.49409704327111,5.83572734661674,4.58024928485045,4.36236172192088,11.6533482861923,16.9061603509621,14.4592442770173,14.5464365375719,17.8144982521409,22.7651533647326,9.00421902675573,11.303908404579,13.2034965396327,26.9771890649305,2.8363667971736,0.786235980452812,2.24862112384854,3.44862206360455,3.13530307678142,5.34714288740982,6.32931502391783,5.5125977103512,8.23684239564244,23.0029130443767,18.2349064357567,27.7713529071959,32.3300963772303,22.0658818631952,25.5695066322585,50.0681145351499,11.7484675297701,17.9261474086228,24.1038021800767,35.6729177398523,50.5868897474284,60.2250411441615,44.1002044158625,67.4678416774497,66.88233627393,80.524658172031,89.3055065200772,60.9577985986611,61.1865517799794,21.1107797514981,17.9488875660174,2.45882136509518,7.72622889653251,25.5275438080589,31.9987904396715,1.14754461763673,22.9748543755979,5.67914794949262,7.02789739733949,7.32439552291516,4.77937595905104,7.12955757063661,7.35998980050964,4.04810701674894,9.35218745316198,9.09161889277004,19.921921618152,24.1298144854057,7.30068975035746,12.3794089108718,14.6823409445557,9.2921596837974,5.09839335925461,4.23252979750651,5.09233715340925,4.42952839321159,10.4527950300935,11.3708448994017,12.3601468022352,9.9819265947722,14.2216541071117,11.5960469432499,15.470331487228,29.2778060948258,5.94201610303324,3.88076051348264,6.64444808597936,11.7044554203901,11.2372355089304,11.8475294833527,4.26250928760439,4.22409074514679,4.02480934641258,4.19003956304428,12.366468970611,12.9171541356724,12.9672788595535,11.5791173683042,18.5479216711919,11.3677526285642,22.2510362412612,7.86006051670122,10.7321171340876,6.11141940320049,6.02779062415011,5.46776910884101,5.49067615695654,1.01987057996313,0.559805809294632,0.829199842826543,0,8.54107182669065,7.9294592179471,7.45236851670429,9.61806161666556,7.86105229486239,10.1148259788616,10.579642332843,7.32916637555283,2.07383957266869,3.10669656543463,0,14.9516546043979,13.2366792365678,12.055973677331,16.0158181112387,13.3475339137715,15.1390837853023,7.42164993610516,4.08951443260272,2.17425708743405,1.72818003754719,1.26404448251271,3.24360344464263,2.36235201479103,2.33857481360031,2.14832034800978,2.18549490259391,1.80293174279953,1.9199638532695,2.22126189885925,1.37172251979,2.31900225814733,1.94915761479505,2.50150788264857,3.50630706544707,8.38902419376282,0,0,0.167884616364078,9.46629010757733,8.82107634620555,8.97442958909599,7.71726164684637,6.52043735245972,55.3456805764725,50.6357760157895,51.5605962095457,56.8834033557606,49.3259414234862,43.8128460486026,42.5264175146038,41.8798718998525,52.1113770331835,41.4208249401456,5.91587881229807,15.1629451892392,16.0489589408886,13.1277627216879,6.91723436672342,8.27295788025063,18.4464784075341,18.3371200942616,15.7250412699989,16.172621552883,12.1670063947315,19.4285131627658,16.3872638072294,18.0550929781731,18.1496081899738,21.4332161077383,15.7602683285003,21.605832691935,18.5438655361488,17.3694725758589,14.057639347802,14.9079677173843,16.2136609164178,19.476419828732,18.9159854634815,19.1229013835189,17.0123014771678,15.5211129748327,15.75327720612,18.5176949647054,16.7275375555086,17.4352933804747,17.187703813127,17.5078630540142,15.046715656529,10.7418548513317,13.3341016813883,11.3881658645598,10.9034349279241,14.7796250810075,17.3900876715316
|short_description=p1@Dock4
}}
}}

Latest revision as of 14:52, 26 September 2015

Short description:p1@Dock4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dock4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000037488, NM_172803, uc007nlc.1, uc007nld.1, uc007nle.1, uc007nlf.1, uc007nlg.1, uc007nlh.1, uc007nlk.2_5end
EntrezGene:Dock4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dock4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C320.84
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I644.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.80
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.91
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G366.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.11
Mouse hepatocyte, donor6.CNhs13090.11822-124F437.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.62
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D715.88
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F511.30
adrenal gland, neonate N00.CNhs11191.1311-23C116.82
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H112.58
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A617.45
bone (os femoris), neonate N20.CNhs11195.1350-25C317.46
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B285.49
cerebellum, neonate N30.CNhs11135.1395-42I295.93
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A428.61
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F130.41
cortex, adult.CNhs10473.12-14D544.50
cortex, neonate N30.CNhs11107.1392-42F248.07
diencephalon, adult.CNhs10482.20-12F232.00
diencephalon, neonate N30.CNhs11201.1388-42B239.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.94
epididymis, adult.CNhs10490.58-23B213.39
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C69.37
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D413.41
eyeball, neonate N00.CNhs11207.633-15C615.24
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G812.65
eyeball, neonate N16.CNhs11188.777-19A29.57
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H213.24
forelimb, embryo E13.CNhs10589.384-1E213.55
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I628.66
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I910.62
heart, embryo E14.CNhs10597.403-26D48.05
heart, embryo E15.CNhs11017.431-16C810.43
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E312.38
heart, neonate N03.CNhs11221.1349-25I212.84
heart, neonate N10.CNhs11118.749-24G120.36
heart, neonate N16.CNhs11209.782-15G120.59
heart, neonate N20.CNhs11127.821-26I619.88
heart, neonate N25.CNhs11196.1351-25D323.27
heart, neonate N30.CNhs11202.1390-42D220.40
hippocampus, adult.CNhs10478.13-16E8105.57
hippocampus, neonate N00.CNhs11228.627-43G131.08
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I58.53
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H47.26
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F811.65
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I214.46
kidney, embryo E18.CNhs11001.1288-20C714.55
kidney, neonate N00.CNhs11214.646-21G717.81
kidney, neonate N10.CNhs11206.758-6D522.77
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F311.30
kidney, neonate N30.CNhs11203.1385-42H113.20
liver, adult pregnant day01.CNhs10466.508-5B226.98
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B927.77
liver, neonate N20.CNhs11220.823-25A332.33
liver, neonate N25.CNhs11198.1368-26H122.07
liver, neonate N30.CNhs11106.1382-42D125.57
lung, adult.CNhs10474.28-22B150.07
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F817.93
lung, embryo E15.CNhs11020.432-17C524.10
lung, embryo E16.CNhs10998.458-17B635.67
lung, embryo E17.CNhs10605.480-44A650.59
lung, embryo E18.CNhs10583.1287-20I660.23
lung, neonate N00.CNhs11224.640-42C644.10
lung, neonate N06.CNhs11212.683-20E567.47
lung, neonate N07.CNhs11111.715-19A366.88
lung, neonate N10.CNhs11219.750-23E680.52
lung, neonate N20.CNhs11109.822-18A489.31
lung, neonate N25.CNhs11119.1359-25C760.96
lung, neonate N30.CNhs11133.1394-42H261.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C225.53
medulla oblongata, neonate N30.CNhs11200.1396-42A332.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.97
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I919.92
ovary, adult.CNhs10507.91-2I724.13
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I412.38
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B911.70
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H312.97
skin, neonate N06.CNhs11097.693-20I511.58
skin, neonate N10.CNhs11108.762-6C418.55
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C922.25
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C110.73
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D47.45
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C67.86
stomach, neonate N03.CNhs11193.1340-24B810.11
stomach, neonate N07.CNhs11210.718-18A910.58
stomach, neonate N25.CNhs11104.1355-25E47.33
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F514.95
testis, embryo E15.CNhs11034.443-27C513.24
testis, embryo E16.CNhs11033.470-26G512.06
testis, embryo E17.CNhs11029.486-18I516.02
testis, embryo E18.CNhs11027.503-18G513.35
testis, neonate N00.CNhs11189.1300-22B715.14
testis, neonate N07.CNhs11222.726-26I47.42
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.35
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A351.56
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A449.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.42
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H216.05
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.51
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D114.78
whole body, neonate N10.CNhs10518.761-6B417.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.46e-0723
neuroblast (sensu Vertebrata)6.46e-0723

Uber anatomy
Ontology termp-valuen
tube2.26e-18114
anatomical conduit3.81e-16122
regional part of nervous system8.23e-1354
neural tube6.65e-1252
neural rod6.65e-1252
future spinal cord6.65e-1252
neural keel6.65e-1252
gray matter3.07e-1134
brain9.68e-1147
future brain9.68e-1147
regional part of brain1.96e-1046
brain grey matter3.02e-1029
regional part of telencephalon3.02e-1029
telencephalon3.02e-1029
neurectoderm4.98e-1064
neural plate4.98e-1064
presumptive neural plate4.98e-1064
central nervous system1.37e-0973
anterior neural tube1.73e-0940
ecto-epithelium3.64e-0973
structure with developmental contribution from neural crest4.52e-0992
regional part of forebrain4.52e-0939
forebrain4.52e-0939
future forebrain4.52e-0939
tissue6.93e-09349
nervous system9.13e-0975
pre-chordal neural plate1.65e-0849
lung1.85e-0814
respiratory tube1.85e-0814
respiration organ1.85e-0814
pair of lungs1.85e-0814
lung primordium1.85e-0814
lung bud1.85e-0814
occipital lobe2.86e-0710
visual cortex2.86e-0710
neocortex2.86e-0710
ectoderm-derived structure3.31e-0795
ectoderm3.31e-0795
presumptive ectoderm3.31e-0795
cerebral cortex9.26e-0721
cerebral hemisphere9.26e-0721
pallium9.26e-0721
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