FFCP PHASE1:Mm9::chr2:35318313..35318352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14594 | |EntrezGene=14594 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1156 | |MCL_coexpression_id=1156 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=398bp_to_ENSMUST00000149442_5end | |association_with_transcript=398bp_to_ENSMUST00000149442_5end | ||
|cluster_id=chr2:35318313..35318352,- | |||
|description=CAGE_peak_5_at_Ggta1_5end | |description=CAGE_peak_5_at_Ggta1_5end | ||
|id=chr2:35318313..35318352,- | |id=chr2:35318313..35318352,- | ||
|ontology_enrichment_celltype=CL:0000049!3.04e-07!19 | |ontology_enrichment_celltype=CL:0000049!3.04e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.68e-13,19;CL:0000763,2.24e-10,16;CL:0000988,1.14e-09,32;CL:0002032,1.14e-09,32;CL:0000037,1.14e-09,32;CL:0000837,1.14e-09,32;CL:0000839,3.99e-08,13;CL:0000557,9.86e-08,7;CL:0000553,2.02e-07,6;CL:0000556,2.02e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.19e-10!48;UBERON:0002390!1.58e-09!45;UBERON:0003061!1.58e-09!45;UBERON:0002371!6.46e-09!16;UBERON:0001474!9.47e-09!22;UBERON:0004765!9.47e-09!22;UBERON:0001434!9.47e-09!22;UBERON:0002204!9.65e-09!32;UBERON:0003081!5.12e-08!88;UBERON:0002405!2.82e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!1.19e-10!48;UBERON:0002390!1.58e-09!45;UBERON:0003061!1.58e-09!45;UBERON:0002371!6.46e-09!16;UBERON:0001474!9.47e-09!22;UBERON:0004765!9.47e-09!22;UBERON:0001434!9.47e-09!22;UBERON:0002204!9.65e-09!32;UBERON:0003081!5.12e-08!88;UBERON:0002405!2.82e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.12e-22,48;UBERON:0002405,2.12e-22,48;UBERON:0002390,3.28e-21,45;UBERON:0003061,3.28e-21,45;UBERON:0002371,3.10e-14,16;UBERON:0002204,5.87e-13,32;UBERON:0001474,2.26e-12,22;UBERON:0004765,2.26e-12,22;UBERON:0001434,2.26e-12,22;UBERON:0003081,5.29e-12,87;UBERON:0004177,4.51e-09,29;UBERON:0005057,4.51e-09,29;UBERON:0000926,3.47e-08,120;UBERON:0004120,3.47e-08,120;UBERON:0006603,3.47e-08,120;UBERON:0002106,2.50e-07,6;UBERON:0004457,2.50e-07,6;UBERON:0000042,2.50e-07,6;UBERON:0004854,2.50e-07,6;UBERON:0009034,2.50e-07,6;UBERON:0002095,2.50e-07,6;UBERON:0004782,2.50e-07,6;UBERON:0003281,2.50e-07,6;UBERON:0009664,2.50e-07,6;UBERON:0002296,2.50e-07,6;UBERON:0005602,2.50e-07,6;UBERON:0001179,2.50e-07,6;UBERON:0006293,2.50e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,2.33176833270964,1.01237633694913,1.39912375625629,11.3566379528966,9.87223921961319,11.0341309467488,0.425216450755349,4.17021995043718,7.83599367416806,0.799962113967033,1.37645568640302,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,2.92972141515835,1.5626706890476,4.71171369576418,3.52938892818609,4.09827290975067,3.39857247121808,1.6366586336825,0.811015449756117,0.367093504323363,0,0.436050312760893,0.659058548203415,0.194429899074283,0.55994568650145,0,3.02008690903925,0,0.336093799142464,0.257259436035947,1.14613375975503,0,0.202316460859598,0,0,0.338844532069132,0,2.2497492932035,1.97773272513395,0.7104801149461,1.79760066311043,1.15265491596466,0.103689612308478,0,0.210324961351382,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0.427115042397309,0,0.151452386666368,0,0,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.45673551887624,6.21450920753212,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,0.247194967734374,0.578397427679647,2.65383165584962,0.808834249737046,0.441683036920787,2.42437626567611,1.86391761218122,0.292780797011547,0,0,5.75112597628417,1.19980546198682,5.33694953706872,0.149790639404823,0.457500602818626,0,0,0,0,0.162241263067758,1.2220723662038,1.61729061793121,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.398068533636986,2.1066395619397,1.02939162845886,1.98914449576915,0.414251545071004,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.308534225774757,0.697601834251224,0,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0,0.402619256281115,0,0.205809224758569,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.951128130562796,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,0.569003702859245,0.114248512609729,0,1.01825663922657,0.581857461502877,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.964887042726734,1.47802552133284,0.37898282354097,0.488894929326078,0,0,0,0.476087281772027,1.36593553500459,0.788175720530955,0.664394068946325,0.637819074629948,0.81931657357869,1.20879487306127,0.723245292907558,10.5553898757491,15.2293591469239,0,0.275936746304732,0.321101179975584,0.468846746368813,0.819674726883377,0,0.315508219416257,1.17131623288992,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0,1.78065603667255,0.325773918707152,0.329940245945071,0,1.69946445308487,3.93020624054176,2.64047111658257,0.590603785761546,0.922305443831782,1.03371317267288,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0.905510786479282,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0.484393280087717,0.663442174209714,0.477489376012546,0.164140899745061,0,0.18542530201051,2.73393409276564,2.47664241555867,1.11116716421827,2.26042148405629,4.37421528707281,2.97411625168479,2.03974115992626,2.09927178485487,2.21119958087078,0,0.474503990371703,1.82987520414164,0.972048067396211,0.418176592028937,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.387479470433193,0.506868376472335,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0.316011120628178,3.24360344464263,4.00572732942826,1.68897069871134,2.32734704367726,2.38417625737518,2.88469078847925,1.9199638532695,3.23092639834072,1.67654974641,1.10908803650525,1.26695244961678,1.15454209968395,0.701261413089414,0,1.33191572024439,1.79427713218951,0.839423081820392,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,1.21553358534147,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.754505365544305,0.655490552289177,0.768301828858431,0.516919220600519,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.470546902076653,0.676916863133412,1.09756783723664,0.526139422875686,1.7654534799962,2.80571135828869,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| |phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,2.33176833270964,1.01237633694913,1.39912375625629,11.3566379528966,9.87223921961319,11.0341309467488,0.425216450755349,4.17021995043718,7.83599367416806,0.799962113967033,1.37645568640302,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,2.92972141515835,1.5626706890476,4.71171369576418,3.52938892818609,4.09827290975067,3.39857247121808,1.6366586336825,0.811015449756117,0.367093504323363,0,0.436050312760893,0.659058548203415,0.194429899074283,0.55994568650145,0,3.02008690903925,0,0.336093799142464,0.257259436035947,1.14613375975503,0,0.202316460859598,0,0,0.338844532069132,0,2.2497492932035,1.97773272513395,0.7104801149461,1.79760066311043,1.15265491596466,0.103689612308478,0,0.210324961351382,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0.427115042397309,0,0.151452386666368,0,0,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.45673551887624,6.21450920753212,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,0.247194967734374,0.578397427679647,2.65383165584962,0.808834249737046,0.441683036920787,2.42437626567611,1.86391761218122,0.292780797011547,0,0,5.75112597628417,1.19980546198682,5.33694953706872,0.149790639404823,0.457500602818626,0,0,0,0,0.162241263067758,1.2220723662038,1.61729061793121,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.398068533636986,2.1066395619397,1.02939162845886,1.98914449576915,0.414251545071004,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.308534225774757,0.697601834251224,0,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0,0.402619256281115,0,0.205809224758569,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.951128130562796,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,0.569003702859245,0.114248512609729,0,1.01825663922657,0.581857461502877,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.964887042726734,1.47802552133284,0.37898282354097,0.488894929326078,0,0,0,0.476087281772027,1.36593553500459,0.788175720530955,0.664394068946325,0.637819074629948,0.81931657357869,1.20879487306127,0.723245292907558,10.5553898757491,15.2293591469239,0,0.275936746304732,0.321101179975584,0.468846746368813,0.819674726883377,0,0.315508219416257,1.17131623288992,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0,1.78065603667255,0.325773918707152,0.329940245945071,0,1.69946445308487,3.93020624054176,2.64047111658257,0.590603785761546,0.922305443831782,1.03371317267288,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0.905510786479282,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0.484393280087717,0.663442174209714,0.477489376012546,0.164140899745061,0,0.18542530201051,2.73393409276564,2.47664241555867,1.11116716421827,2.26042148405629,4.37421528707281,2.97411625168479,2.03974115992626,2.09927178485487,2.21119958087078,0,0.474503990371703,1.82987520414164,0.972048067396211,0.418176592028937,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.387479470433193,0.506868376472335,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0.316011120628178,3.24360344464263,4.00572732942826,1.68897069871134,2.32734704367726,2.38417625737518,2.88469078847925,1.9199638532695,3.23092639834072,1.67654974641,1.10908803650525,1.26695244961678,1.15454209968395,0.701261413089414,0,1.33191572024439,1.79427713218951,0.839423081820392,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,1.21553358534147,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.754505365544305,0.655490552289177,0.768301828858431,0.516919220600519,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.470546902076653,0.676916863133412,1.09756783723664,0.526139422875686,1.7654534799962,2.80571135828869,1.66089025373844,0.689531376628944,0.818462086339379,0.929621047115796,1.54325288784913,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0.882365676478062,0.231867835620421 | ||
|short_description=p5@Ggta1 | |short_description=p5@Ggta1 | ||
}} | }} |
Latest revision as of 15:55, 26 September 2015
Short description: | p5@Ggta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ggta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1156 |
Association with transcript: | 398bp_to_ENSMUST00000149442_5end |
EntrezGene: | Ggta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.68e-13 | 19 |
myeloid cell | 2.24e-10 | 16 |
hematopoietic cell | 1.14e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.14e-09 | 32 |
hematopoietic stem cell | 1.14e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.14e-09 | 32 |
myeloid lineage restricted progenitor cell | 3.99e-08 | 13 |
granulocyte monocyte progenitor cell | 9.86e-08 | 7 |
megakaryocyte progenitor cell | 2.02e-07 | 6 |
megakaryocyte | 2.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.12e-22 | 48 |
immune system | 2.12e-22 | 48 |
hematopoietic system | 3.28e-21 | 45 |
blood island | 3.28e-21 | 45 |
bone marrow | 3.10e-14 | 16 |
musculoskeletal system | 5.87e-13 | 32 |
bone element | 2.26e-12 | 22 |
skeletal element | 2.26e-12 | 22 |
skeletal system | 2.26e-12 | 22 |
lateral plate mesoderm | 5.29e-12 | 87 |
hemopoietic organ | 4.51e-09 | 29 |
immune organ | 4.51e-09 | 29 |
mesoderm | 3.47e-08 | 120 |
mesoderm-derived structure | 3.47e-08 | 120 |
presumptive mesoderm | 3.47e-08 | 120 |
spleen | 2.50e-07 | 6 |
cavity lining | 2.50e-07 | 6 |
serous membrane | 2.50e-07 | 6 |
gastrointestinal system mesentery | 2.50e-07 | 6 |
stomach region | 2.50e-07 | 6 |
mesentery | 2.50e-07 | 6 |
gastrointestinal system serosa | 2.50e-07 | 6 |
mesentery of stomach | 2.50e-07 | 6 |
gut mesentery | 2.50e-07 | 6 |
dorsal mesentery | 2.50e-07 | 6 |
dorsal mesogastrium | 2.50e-07 | 6 |
peritoneal cavity | 2.50e-07 | 6 |
spleen primordium | 2.50e-07 | 6 |