FFCP PHASE1:Mm9::chr9:45753246..45753276,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=214597 | |EntrezGene=214597 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENSMUST00000160927_5end | |||
|cluster_id=chr9:45753246..45753276,- | |||
|description=CAGE_peak_8_at_Sidt2_5end | |||
|id=chr9:45753246..45753276,- | |||
|ontology_enrichment_celltype=CL:0000542!1.14e-08!13;CL:0000051!1.14e-08!13;CL:0000838!1.25e-08!12;CL:0000084!7.91e-08!11;CL:0000827!7.91e-08!11;CL:0002031!3.60e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.14e-16,25;CL:0000838,3.07e-14,12;CL:0000542,5.70e-13,13;CL:0000051,5.70e-13,13;CL:0000084,1.78e-12,11;CL:0000827,1.78e-12,11;CL:0000988,9.02e-12,32;CL:0002032,9.02e-12,32;CL:0000037,9.02e-12,32;CL:0000837,9.02e-12,32;CL:0000738,1.93e-11,17;CL:0002087,1.93e-11,17;CL:0000791,1.26e-09,9;CL:0000789,1.26e-09,9;CL:0002420,1.26e-09,9;CL:0002419,1.26e-09,9;CL:0000790,1.26e-09,9;CL:0000553,2.76e-08,6;CL:0000556,2.76e-08,6;CL:0000624,4.77e-08,8;CL:0002320,5.11e-08,46;CL:0000134,5.11e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.45e-07,3;DOID:4045,2.45e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.76e-15!48;UBERON:0002390!1.57e-14!45;UBERON:0003061!1.57e-14!45;UBERON:0004177!2.25e-14!29;UBERON:0002405!2.90e-12!70;UBERON:0003408!8.89e-12!24;UBERON:0002370!3.10e-11!23;UBERON:0000974!3.10e-11!23;UBERON:0004807!3.10e-11!23;UBERON:0005058!3.10e-11!23;UBERON:0003351!3.10e-11!23;UBERON:0009113!3.10e-11!23;UBERON:0003295!3.10e-11!23;UBERON:0009722!3.10e-11!23;UBERON:0005562!3.10e-11!23;UBERON:0007690!3.10e-11!23;UBERON:0006562!2.16e-10!24;UBERON:0001557!2.16e-10!24;UBERON:0001042!2.16e-10!24;UBERON:0008814!2.16e-10!24;UBERON:0009145!2.16e-10!24;UBERON:0005057!4.35e-10!51;UBERON:0000072!2.71e-09!27;UBERON:0001004!4.46e-08!42;UBERON:0000065!1.24e-07!41;UBERON:0000077!8.09e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.30e-27,48;UBERON:0002405,1.30e-27,48;UBERON:0002390,1.53e-25,45;UBERON:0003061,1.53e-25,45;UBERON:0004177,1.39e-22,29;UBERON:0005057,1.39e-22,29;UBERON:0003408,4.95e-20,24;UBERON:0002370,7.96e-19,23;UBERON:0000974,7.96e-19,23;UBERON:0004807,7.96e-19,23;UBERON:0005058,7.96e-19,23;UBERON:0003351,7.96e-19,23;UBERON:0009113,7.96e-19,23;UBERON:0003295,7.96e-19,23;UBERON:0009722,7.96e-19,23;UBERON:0005562,7.96e-19,23;UBERON:0007690,7.96e-19,23;UBERON:0006562,7.36e-18,24;UBERON:0001557,7.36e-18,24;UBERON:0001042,7.36e-18,24;UBERON:0008814,7.36e-18,24;UBERON:0009145,7.36e-18,24;UBERON:0000077,9.07e-18,35;UBERON:0000072,2.15e-15,27;UBERON:0007811,7.68e-12,36;UBERON:0003081,9.27e-12,87;UBERON:0001004,9.91e-11,42;UBERON:0000065,7.05e-10,41;UBERON:0000153,3.31e-09,43;UBERON:0000926,4.35e-09,120;UBERON:0004120,4.35e-09,120;UBERON:0006603,4.35e-09,120;UBERON:0002384,5.11e-08,46 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,3.87369970324729,1.40788722151667,1.87251621057595,0.171217968225505,0.398860794976682,5.64962408772979,7.60557501045277,2.33176833270964,2.22722794128809,0,10.4102514568218,10.2835825204304,16.5511964201232,0.255129870453209,2.28369187762036,2.61199789138935,1.11994695955385,0,0.57423196411502,0,0,0.380046838912748,0,0,0,0,0,0,0,0,27.204555997899,10.1573594788094,17.7998072951091,24.1174910092716,20.4913645487534,23.7900072985265,0,0,0,0,0,0.219686182734472,0.388859798148567,0.419959264876088,0,10.9058693937529,3.62681071005672,4.36921938885203,0,0,0,0,0,0,0,0.889294796111139,0,0,2.1314403448383,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0.505524445014783,0.68510327831436,11.3932668804756,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.144599356919912,6.19227386364912,0,0.662524555381181,0,0,0,0.209446706813455,0.766371165625774,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,1.11966273549084,0,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0.863088412352432,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0,1.29327233116623,0,0,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0,0.318909537314974,0.655453258862952,0,0.289298117163023,3.01582567878545,0,0,0.827810238914197,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0,0,0,0,0,0,0.938686832254841,0,0,0,0.161464426695906,0,0,0,0.582961673259701,0,3.58828849675491,0.206386867963223,0.555583582109135,1.31857919903284,2.1871076435364,4.11800711771741,1.35982743995084,1.95932033253121,1.52019971184866,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,1.24267862617385,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0.104859344425711,0,0.576060012515731,5.05617793005085,0.202725215290164,1.1298205288131,0.649604114888975,3.04345382634718,3.57626438606277,2.16351809135944,1.9199638532695,3.02899349844443,1.98137697303,2.31900225814733,3.50848370663109,2.98256709085021,3.15567635890236,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0.282328141245992,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,3.87369970324729,1.40788722151667,1.87251621057595,0.171217968225505,0.398860794976682,5.64962408772979,7.60557501045277,2.33176833270964,2.22722794128809,0,10.4102514568218,10.2835825204304,16.5511964201232,0.255129870453209,2.28369187762036,2.61199789138935,1.11994695955385,0,0.57423196411502,0,0,0.380046838912748,0,0,0,0,0,0,0,0,27.204555997899,10.1573594788094,17.7998072951091,24.1174910092716,20.4913645487534,23.7900072985265,0,0,0,0,0,0.219686182734472,0.388859798148567,0.419959264876088,0,10.9058693937529,3.62681071005672,4.36921938885203,0,0,0,0,0,0,0,0.889294796111139,0,0,2.1314403448383,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0.505524445014783,0.68510327831436,11.3932668804756,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.144599356919912,6.19227386364912,0,0.662524555381181,0,0,0,0.209446706813455,0.766371165625774,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,1.11966273549084,0,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0.863088412352432,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0,1.29327233116623,0,0,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0,0.318909537314974,0.655453258862952,0,0.289298117163023,3.01582567878545,0,0,0.827810238914197,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0,0,0,0,0,0,0.938686832254841,0,0,0,0.161464426695906,0,0,0,0.582961673259701,0,3.58828849675491,0.206386867963223,0.555583582109135,1.31857919903284,2.1871076435364,4.11800711771741,1.35982743995084,1.95932033253121,1.52019971184866,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,1.24267862617385,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0.104859344425711,0,0.576060012515731,5.05617793005085,0.202725215290164,1.1298205288131,0.649604114888975,3.04345382634718,3.57626438606277,2.16351809135944,1.9199638532695,3.02899349844443,1.98137697303,2.31900225814733,3.50848370663109,2.98256709085021,3.15567635890236,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0.282328141245992,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.695603506861264 | ||
|short_description=p8@Sidt2 | |||
}} | }} |
Latest revision as of 17:55, 26 September 2015
Short description: | p8@Sidt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sidt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | -130bp_to_ENSMUST00000160927_5end |
EntrezGene: | Sidt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.14e-16 | 25 |
lymphoid lineage restricted progenitor cell | 3.07e-14 | 12 |
lymphocyte | 5.70e-13 | 13 |
common lymphoid progenitor | 5.70e-13 | 13 |
T cell | 1.78e-12 | 11 |
pro-T cell | 1.78e-12 | 11 |
hematopoietic cell | 9.02e-12 | 32 |
hematopoietic oligopotent progenitor cell | 9.02e-12 | 32 |
hematopoietic stem cell | 9.02e-12 | 32 |
hematopoietic multipotent progenitor cell | 9.02e-12 | 32 |
leukocyte | 1.93e-11 | 17 |
nongranular leukocyte | 1.93e-11 | 17 |
mature alpha-beta T cell | 1.26e-09 | 9 |
alpha-beta T cell | 1.26e-09 | 9 |
immature T cell | 1.26e-09 | 9 |
mature T cell | 1.26e-09 | 9 |
immature alpha-beta T cell | 1.26e-09 | 9 |
megakaryocyte progenitor cell | 2.76e-08 | 6 |
megakaryocyte | 2.76e-08 | 6 |
CD4-positive, alpha-beta T cell | 4.77e-08 | 8 |
connective tissue cell | 5.11e-08 | 46 |
mesenchymal cell | 5.11e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.30e-27 | 48 |
immune system | 1.30e-27 | 48 |
hematopoietic system | 1.53e-25 | 45 |
blood island | 1.53e-25 | 45 |
hemopoietic organ | 1.39e-22 | 29 |
immune organ | 1.39e-22 | 29 |
gland of gut | 4.95e-20 | 24 |
thymus | 7.96e-19 | 23 |
neck | 7.96e-19 | 23 |
respiratory system epithelium | 7.96e-19 | 23 |
hemolymphoid system gland | 7.96e-19 | 23 |
pharyngeal epithelium | 7.96e-19 | 23 |
thymic region | 7.96e-19 | 23 |
pharyngeal gland | 7.96e-19 | 23 |
entire pharyngeal arch endoderm | 7.96e-19 | 23 |
thymus primordium | 7.96e-19 | 23 |
early pharyngeal endoderm | 7.96e-19 | 23 |
pharynx | 7.36e-18 | 24 |
upper respiratory tract | 7.36e-18 | 24 |
chordate pharynx | 7.36e-18 | 24 |
pharyngeal arch system | 7.36e-18 | 24 |
pharyngeal region of foregut | 7.36e-18 | 24 |
mixed endoderm/mesoderm-derived structure | 9.07e-18 | 35 |
segment of respiratory tract | 2.15e-15 | 27 |
craniocervical region | 7.68e-12 | 36 |
lateral plate mesoderm | 9.27e-12 | 87 |
respiratory system | 9.91e-11 | 42 |
respiratory tract | 7.05e-10 | 41 |
anterior region of body | 3.31e-09 | 43 |
mesoderm | 4.35e-09 | 120 |
mesoderm-derived structure | 4.35e-09 | 120 |
presumptive mesoderm | 4.35e-09 | 120 |
connective tissue | 5.11e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.45e-07 | 3 |
muscle cancer | 2.45e-07 | 3 |