FFCP PHASE1:Mm9::chr15:36724045..36724056,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:36724045..36724056,-
|short_description=p7@Ywhaz
|description=CAGE_peak_7_at_Ywhaz_5end
|association_with_transcript=229bp_to_ENSMUST00000110361_5end
|En...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22631 | |EntrezGene=22631 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P63101 | |UniProt=P63101 | ||
|association_with_transcript=229bp_to_ENSMUST00000110361_5end | |||
|cluster_id=chr15:36724045..36724056,- | |||
|description=CAGE_peak_7_at_Ywhaz_5end | |||
|id=chr15:36724045..36724056,- | |||
|ontology_enrichment_celltype=CL:0000117!2.75e-08!23;CL:0000337!2.75e-08!23;CL:0000393!6.50e-07!39;CL:0000211!6.50e-07!39;CL:0000540!7.58e-07!33;CL:0000047!7.58e-07!33;CL:0000031!7.58e-07!33;CL:0000404!7.58e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-08,23;CL:0000337,2.23e-08,23;CL:0000393,3.48e-07,39;CL:0000211,3.48e-07,39;CL:0000540,4.32e-07,33;CL:0000047,4.32e-07,33;CL:0000031,4.32e-07,33;CL:0000404,4.32e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.56e-15!52;UBERON:0005068!1.56e-15!52;UBERON:0006241!1.56e-15!52;UBERON:0007135!1.56e-15!52;UBERON:0001017!1.84e-15!73;UBERON:0005743!1.84e-15!73;UBERON:0002020!5.50e-15!34;UBERON:0000073!1.72e-14!75;UBERON:0001016!1.72e-14!75;UBERON:0002346!9.81e-14!71;UBERON:0003075!9.81e-14!71;UBERON:0007284!9.81e-14!71;UBERON:0000955!1.81e-13!50;UBERON:0006238!1.81e-13!50;UBERON:0002616!6.90e-13!49;UBERON:0003080!7.54e-13!40;UBERON:0002791!2.08e-12!29;UBERON:0003528!2.08e-12!29;UBERON:0001893!2.08e-12!29;UBERON:0002780!2.77e-12!39;UBERON:0001890!2.77e-12!39;UBERON:0006240!2.77e-12!39;UBERON:0004121!2.27e-11!102;UBERON:0000924!2.27e-11!102;UBERON:0006601!2.27e-11!102;UBERON:0000033!6.70e-11!63;UBERON:0003056!7.28e-11!49;UBERON:0000956!1.77e-10!21;UBERON:0001869!1.77e-10!21;UBERON:0000203!1.77e-10!21;UBERON:0002619!1.27e-08!17;UBERON:0002021!6.61e-08!10;UBERON:0000411!6.61e-08!10;UBERON:0001950!6.61e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.51e-16,73;UBERON:0001049,9.13e-16,52;UBERON:0005068,9.13e-16,52;UBERON:0006241,9.13e-16,52;UBERON:0007135,9.13e-16,52;UBERON:0000073,1.26e-15,54;UBERON:0002020,3.62e-15,34;UBERON:0001016,8.57e-15,75;UBERON:0002346,5.16e-14,64;UBERON:0003075,5.16e-14,64;UBERON:0007284,5.16e-14,64;UBERON:0000955,2.16e-13,47;UBERON:0006238,2.16e-13,47;UBERON:0003080,7.34e-13,40;UBERON:0002616,8.45e-13,46;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0002780,2.73e-12,39;UBERON:0001890,2.73e-12,39;UBERON:0006240,2.73e-12,39;UBERON:0010371,1.06e-11,73;UBERON:0004121,2.18e-11,95;UBERON:0000924,2.18e-11,95;UBERON:0006601,2.18e-11,95;UBERON:0003056,5.96e-11,49;UBERON:0000956,1.34e-10,21;UBERON:0001869,1.34e-10,21;UBERON:0000203,1.34e-10,21;UBERON:0010314,6.67e-09,92;UBERON:0002619,1.02e-08,17;UBERON:0002021,5.42e-08,10;UBERON:0000411,5.42e-08,10;UBERON:0001950,5.42e-08,10 | |||
|phase1_expression=1.60148847104794,1.39590163055744,2.27499619694768,1.20985684522732,1.50268718983904,2.01455126294268,1.86890112476421,0.645616617207881,0.140788722151667,0,0.513653904676515,0.239316476986009,1.02720437958723,0.437102012094987,1.66554880907831,0.202475267389826,0,0.473193248037357,1.37114433605739,0.84877930359606,1.78590909317247,1.29078236561151,1.04479915655574,0.639969691173627,0.68822784320151,1.72269589234506,3.4460959692726,2.15471232685889,0.760093677825496,0.504060259519861,1.77384408524244,0.635030673459631,0,0,0.866554859253824,0.997407872150954,0.612508068787107,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,3.14742044938943,2.93993100536592,3.30384153891027,0,0.65407546914134,1.31811709640683,1.55543919259427,2.65974201088189,1.43752564364972,0.503347818173209,0.725362142011344,1.68046899571232,0.514518872071894,2.29226751951005,1.03134418455488,4.85559506063035,7.40587370980846,3.1691570175309,1.69422266034566,0,3.1496490104849,1.97773272513395,1.4209602298922,0.599200221036809,1.15265491596466,2.59224030771194,3.91517221161903,3.99617426567626,2.85650984403804,3.97563373712904,4.89963196859816,4.79227355091182,1.83843757322004,1.10115880999389,2.93680877595932,3.68655679814984,5.14356522147756,7.31901148819277,6.77187381723788,1.11673199600552,1.68828783009504,2.59757021220577,5.30331453852602,5.26775218956681,4.65998614563251,0.908714319998209,1.28471652181535,0.579728977403356,1.72084775396277,2.03991400112325,0,0,0.896053774194671,1.12355536105401,2.55645483867087,1.55871602761721,2.47337702157238,2.11265129665021,0,0,0,2.38140145112336,0.760079596425296,0,2.05530983494308,1.29468941823586,1.1875371125186,2.25530924795977,2.74018930480927,2.30615497256059,1.80867168663147,2.23418543557839,1.38233250462643,1.97755974187499,0.722996784599558,0,0.808834249737046,1.10420759230197,0.484875253135222,0,4.9772735491963,3.14170060220183,1.02182822083437,1.31796636956512,1.79970819298022,1.27070227073065,5.84183493678809,4.11750542536764,7.03664371832041,11.298580812498,9.2057564638919,3.32460871295296,5.353961681236,2.34230536855727,1.61729061793121,4.29628689337247,0.420883711772948,1.17108398666433,2.29902104433473,1.44049703844279,1.80845781402858,1.97305847538851,1.92170580427275,2.06143794031403,1.55222022443409,1.07783996466421,1.51284864134255,1.23165786914764,1.53437012699302,1.66828349535359,1.39300866608867,1.4404749548556,1.79130840136644,1.40442637462647,1.28673953557358,0.568326998791185,2.07125772535502,1.17263029990548,1.44049649168812,1.65721314909647,1.37734962223183,0.925602677324269,0.930135779001631,1.87791380979733,2.33530684734339,2.13927804887525,0.985004784474571,1.13496333364198,0.877199924551994,0.658650345873152,1.20785776884335,8.41159794256509,11.936935035997,0.991256348951394,0.793351699990633,2.77274725695804,1.85789337488351,2.31961430379768,2.21851877085677,2.2237804384487,2.47293313946327,0.949058123089023,2.9645811850322,1.75934646160189,1.59165177632921,1.75467678407208,1.79763881730844,0.864552199498777,0.995706366271836,2.46568271239006,1.5994791765362,1.1270773567308,3.05476991767971,1.35766741017338,1.26244475802573,1.07502113111237,1.91893192373483,1.72698600625512,1.60416313098341,2.37162101669719,1.16791574001266,1.37591296579242,0.674586337154561,1.82574109249653,0.72353147925725,1.01850340712568,1.43848068725405,0.810676133875177,1.09824565275233,4.31304619582064,0.744281895337007,2.80833905803104,1.01031551178845,0.896987067609561,0.482443521363367,1.47802552133284,2.4633883530163,1.30371981153621,1.01847051465113,2.58159273117352,1.34005005953453,2.14239276797412,1.17080188714679,1.41871629695572,1.32878813789265,2.23236676120482,0.327726629431476,1.72684981865896,0.867894351489069,3.01582567878545,1.08781136763742,0.491764273019036,1.37968373152366,4.0137647496948,2.57865710502847,1.3114795630134,0.757412781613119,3.47059041357882,1.95219372148319,1.29254038639679,2.38968797952552,2.45078541490634,2.26461224631066,0.404810701674894,0.292255857911312,2.37172666767914,7.39039027770156,2.83880170416537,2.84904965867608,2.60619134965722,1.81467135269789,0,1.69946445308487,0.906970670894253,2.64047111658257,2.95301892880773,0.922305443831782,1.55056975900933,2.54473610634254,1.78248689192361,0.632073515871632,0,3.09406629744561,0.680879211507576,1.44048875225048,2.8458910432206,3.21505552547388,1.77340233642274,0.891844088010353,2.63278432963394,2.74018454203139,0.938686832254841,1.27099242518292,3.30792597082443,1.81374878235628,1.13025098687134,1.44751019827574,1.43246812803764,1.31312719796049,0.874442509889552,2.96680483216816,0.683483523191411,1.65109494370578,2.22233432843654,1.31857919903284,0.820165366326151,1.37266903923914,1.69978429993855,1.6794174278839,1.93479963326193,0.954670618015114,2.68885594543965,2.43983360552218,2.16010681643603,2.92723614420256,1.9652630737156,1.61837215661785,2.23164330458407,1.04702376793612,1.94422459937689,1.24267862617385,1.69107881605257,0.747582730219894,1.15820943319968,1.94451188344048,4.00395452780966,2.70329800785245,2.8165737274981,3.25510962109875,2.41176492179135,0.724752362478018,0.288030006257865,2.8441000856536,1.82452693761148,1.64337531463724,1.16928740680016,1.9692936523423,0.79472541912506,0.961563596159751,1.9199638532695,1.31256384932592,1.5241361331,1.10908803650525,1.94915761479505,2.02044867444692,2.22066114144981,1.13365191807606,0.221985953374065,0.807424709485281,0.839423081820392,0.965947970160952,1.68914227906064,2.01466786693992,2.35805216986972,2.50786052017682,6.21227026878773,10.1271552031579,8.59343270159095,8.59265911718438,8.90607275701835,9.82012066606611,7.42524750254986,8.10578165803597,5.89085131679466,7.7664046762773,1.3492355185943,1.99512436700516,1.87806966329548,2.18796045361465,1.67690530102386,3.30918315210025,2.44471400581777,2.47242068686673,1.92551525755089,2.77966932940177,2.78827229879264,2.64076877940507,1.96647165686753,1.79270426733634,2.52716063404698,2.38146845641537,2.78122382267653,2.89363830695558,0.412085900803307,2.64958056241915,3.08582327146874,2.30718548007139,0.953744759789284,1.88950341622027,2.72917203204459,2.45382362885862,2.19513567447327,1.57841826862706,2.03706170768793,2.80571135828869,1.54225523561426,1.77308068276014,1.22769312950907,1.85924209423159,1.92906610981141,2.74791635731741,2.33931608445408,2.36358159453128,1.3390183244819,3.30887128679273,1.15933917810211 | |phase1_expression=1.60148847104794,1.39590163055744,2.27499619694768,1.20985684522732,1.50268718983904,2.01455126294268,1.86890112476421,0.645616617207881,0.140788722151667,0,0.513653904676515,0.239316476986009,1.02720437958723,0.437102012094987,1.66554880907831,0.202475267389826,0,0.473193248037357,1.37114433605739,0.84877930359606,1.78590909317247,1.29078236561151,1.04479915655574,0.639969691173627,0.68822784320151,1.72269589234506,3.4460959692726,2.15471232685889,0.760093677825496,0.504060259519861,1.77384408524244,0.635030673459631,0,0,0.866554859253824,0.997407872150954,0.612508068787107,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,3.14742044938943,2.93993100536592,3.30384153891027,0,0.65407546914134,1.31811709640683,1.55543919259427,2.65974201088189,1.43752564364972,0.503347818173209,0.725362142011344,1.68046899571232,0.514518872071894,2.29226751951005,1.03134418455488,4.85559506063035,7.40587370980846,3.1691570175309,1.69422266034566,0,3.1496490104849,1.97773272513395,1.4209602298922,0.599200221036809,1.15265491596466,2.59224030771194,3.91517221161903,3.99617426567626,2.85650984403804,3.97563373712904,4.89963196859816,4.79227355091182,1.83843757322004,1.10115880999389,2.93680877595932,3.68655679814984,5.14356522147756,7.31901148819277,6.77187381723788,1.11673199600552,1.68828783009504,2.59757021220577,5.30331453852602,5.26775218956681,4.65998614563251,0.908714319998209,1.28471652181535,0.579728977403356,1.72084775396277,2.03991400112325,0,0,0.896053774194671,1.12355536105401,2.55645483867087,1.55871602761721,2.47337702157238,2.11265129665021,0,0,0,2.38140145112336,0.760079596425296,0,2.05530983494308,1.29468941823586,1.1875371125186,2.25530924795977,2.74018930480927,2.30615497256059,1.80867168663147,2.23418543557839,1.38233250462643,1.97755974187499,0.722996784599558,0,0.808834249737046,1.10420759230197,0.484875253135222,0,4.9772735491963,3.14170060220183,1.02182822083437,1.31796636956512,1.79970819298022,1.27070227073065,5.84183493678809,4.11750542536764,7.03664371832041,11.298580812498,9.2057564638919,3.32460871295296,5.353961681236,2.34230536855727,1.61729061793121,4.29628689337247,0.420883711772948,1.17108398666433,2.29902104433473,1.44049703844279,1.80845781402858,1.97305847538851,1.92170580427275,2.06143794031403,1.55222022443409,1.07783996466421,1.51284864134255,1.23165786914764,1.53437012699302,1.66828349535359,1.39300866608867,1.4404749548556,1.79130840136644,1.40442637462647,1.28673953557358,0.568326998791185,2.07125772535502,1.17263029990548,1.44049649168812,1.65721314909647,1.37734962223183,0.925602677324269,0.930135779001631,1.87791380979733,2.33530684734339,2.13927804887525,0.985004784474571,1.13496333364198,0.877199924551994,0.658650345873152,1.20785776884335,8.41159794256509,11.936935035997,0.991256348951394,0.793351699990633,2.77274725695804,1.85789337488351,2.31961430379768,2.21851877085677,2.2237804384487,2.47293313946327,0.949058123089023,2.9645811850322,1.75934646160189,1.59165177632921,1.75467678407208,1.79763881730844,0.864552199498777,0.995706366271836,2.46568271239006,1.5994791765362,1.1270773567308,3.05476991767971,1.35766741017338,1.26244475802573,1.07502113111237,1.91893192373483,1.72698600625512,1.60416313098341,2.37162101669719,1.16791574001266,1.37591296579242,0.674586337154561,1.82574109249653,0.72353147925725,1.01850340712568,1.43848068725405,0.810676133875177,1.09824565275233,4.31304619582064,0.744281895337007,2.80833905803104,1.01031551178845,0.896987067609561,0.482443521363367,1.47802552133284,2.4633883530163,1.30371981153621,1.01847051465113,2.58159273117352,1.34005005953453,2.14239276797412,1.17080188714679,1.41871629695572,1.32878813789265,2.23236676120482,0.327726629431476,1.72684981865896,0.867894351489069,3.01582567878545,1.08781136763742,0.491764273019036,1.37968373152366,4.0137647496948,2.57865710502847,1.3114795630134,0.757412781613119,3.47059041357882,1.95219372148319,1.29254038639679,2.38968797952552,2.45078541490634,2.26461224631066,0.404810701674894,0.292255857911312,2.37172666767914,7.39039027770156,2.83880170416537,2.84904965867608,2.60619134965722,1.81467135269789,0,1.69946445308487,0.906970670894253,2.64047111658257,2.95301892880773,0.922305443831782,1.55056975900933,2.54473610634254,1.78248689192361,0.632073515871632,0,3.09406629744561,0.680879211507576,1.44048875225048,2.8458910432206,3.21505552547388,1.77340233642274,0.891844088010353,2.63278432963394,2.74018454203139,0.938686832254841,1.27099242518292,3.30792597082443,1.81374878235628,1.13025098687134,1.44751019827574,1.43246812803764,1.31312719796049,0.874442509889552,2.96680483216816,0.683483523191411,1.65109494370578,2.22233432843654,1.31857919903284,0.820165366326151,1.37266903923914,1.69978429993855,1.6794174278839,1.93479963326193,0.954670618015114,2.68885594543965,2.43983360552218,2.16010681643603,2.92723614420256,1.9652630737156,1.61837215661785,2.23164330458407,1.04702376793612,1.94422459937689,1.24267862617385,1.69107881605257,0.747582730219894,1.15820943319968,1.94451188344048,4.00395452780966,2.70329800785245,2.8165737274981,3.25510962109875,2.41176492179135,0.724752362478018,0.288030006257865,2.8441000856536,1.82452693761148,1.64337531463724,1.16928740680016,1.9692936523423,0.79472541912506,0.961563596159751,1.9199638532695,1.31256384932592,1.5241361331,1.10908803650525,1.94915761479505,2.02044867444692,2.22066114144981,1.13365191807606,0.221985953374065,0.807424709485281,0.839423081820392,0.965947970160952,1.68914227906064,2.01466786693992,2.35805216986972,2.50786052017682,6.21227026878773,10.1271552031579,8.59343270159095,8.59265911718438,8.90607275701835,9.82012066606611,7.42524750254986,8.10578165803597,5.89085131679466,7.7664046762773,1.3492355185943,1.99512436700516,1.87806966329548,2.18796045361465,1.67690530102386,3.30918315210025,2.44471400581777,2.47242068686673,1.92551525755089,2.77966932940177,2.78827229879264,2.64076877940507,1.96647165686753,1.79270426733634,2.52716063404698,2.38146845641537,2.78122382267653,2.89363830695558,0.412085900803307,2.64958056241915,3.08582327146874,2.30718548007139,0.953744759789284,1.88950341622027,2.72917203204459,2.45382362885862,2.19513567447327,1.57841826862706,2.03706170768793,2.80571135828869,1.54225523561426,1.77308068276014,1.22769312950907,1.85924209423159,1.92906610981141,2.74791635731741,2.33931608445408,2.36358159453128,1.3390183244819,3.30887128679273,1.15933917810211 | ||
|short_description=p7@Ywhaz | |||
}} | }} |
Latest revision as of 18:20, 26 September 2015
Short description: | p7@Ywhaz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ywhaz_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 229bp_to_ENSMUST00000110361_5end |
EntrezGene: | Ywhaz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.23e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.23e-08 | 23 |
electrically responsive cell | 3.48e-07 | 39 |
electrically active cell | 3.48e-07 | 39 |
neuron | 4.32e-07 | 33 |
neuronal stem cell | 4.32e-07 | 33 |
neuroblast | 4.32e-07 | 33 |
electrically signaling cell | 4.32e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.51e-16 | 73 |
neural tube | 9.13e-16 | 52 |
neural rod | 9.13e-16 | 52 |
future spinal cord | 9.13e-16 | 52 |
neural keel | 9.13e-16 | 52 |
regional part of nervous system | 1.26e-15 | 54 |
gray matter | 3.62e-15 | 34 |
nervous system | 8.57e-15 | 75 |
neurectoderm | 5.16e-14 | 64 |
neural plate | 5.16e-14 | 64 |
presumptive neural plate | 5.16e-14 | 64 |
brain | 2.16e-13 | 47 |
future brain | 2.16e-13 | 47 |
anterior neural tube | 7.34e-13 | 40 |
regional part of brain | 8.45e-13 | 46 |
brain grey matter | 1.48e-12 | 29 |
regional part of telencephalon | 1.48e-12 | 29 |
telencephalon | 1.48e-12 | 29 |
regional part of forebrain | 2.73e-12 | 39 |
forebrain | 2.73e-12 | 39 |
future forebrain | 2.73e-12 | 39 |
ecto-epithelium | 1.06e-11 | 73 |
ectoderm-derived structure | 2.18e-11 | 95 |
ectoderm | 2.18e-11 | 95 |
presumptive ectoderm | 2.18e-11 | 95 |
pre-chordal neural plate | 5.96e-11 | 49 |
cerebral cortex | 1.34e-10 | 21 |
cerebral hemisphere | 1.34e-10 | 21 |
pallium | 1.34e-10 | 21 |
structure with developmental contribution from neural crest | 6.67e-09 | 92 |
regional part of cerebral cortex | 1.02e-08 | 17 |
occipital lobe | 5.42e-08 | 10 |
visual cortex | 5.42e-08 | 10 |
neocortex | 5.42e-08 | 10 |