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FFCP PHASE1:Mm9::chr9:47338426..47338445,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54725
|EntrezGene=54725
|HGNC=
|HGNC=
|MCL_coexpression_id=979
|TSSclassifier=NA
|UniProt=Q8R5M8
|UniProt=Q8R5M8
|association_with_transcript=0bp_to_ENSMUST00000124073,ENSMUST00000148925,NM_001025600,NM_018770,NM_207675,NM_207676,uc009phm.1,uc009phn.1,uc009pho.1,uc009php.1,uc009phq.1,uc009phr.1,uc009phs.1,uc012gsm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000124073,ENSMUST00000148925,NM_001025600,NM_018770,NM_207675,NM_207676,uc009phm.1,uc009phn.1,uc009pho.1,uc009php.1,uc009phq.1,uc009phr.1,uc009phs.1,uc012gsm.1_5end
|cluster_id=chr9:47338426..47338445,+
|description=CAGE_peak_1_at_Cadm1_5end
|description=CAGE_peak_1_at_Cadm1_5end
|id=chr9:47338426..47338445,+
|id=chr9:47338426..47338445,+
|ontology_enrichment_celltype=CL:0000221!1.31e-14!44;CL:0000133!1.31e-14!44;CL:0002319!3.03e-14!43;CL:0000540!5.05e-14!33;CL:0000047!5.05e-14!33;CL:0000031!5.05e-14!33;CL:0000404!5.05e-14!33;CL:0000055!2.05e-09!50;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39;CL:0000117!1.10e-08!23;CL:0000337!1.10e-08!23
|ontology_enrichment_celltype=CL:0000221!1.31e-14!44;CL:0000133!1.31e-14!44;CL:0002319!3.03e-14!43;CL:0000540!5.05e-14!33;CL:0000047!5.05e-14!33;CL:0000031!5.05e-14!33;CL:0000404!5.05e-14!33;CL:0000055!2.05e-09!50;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39;CL:0000117!1.10e-08!23;CL:0000337!1.10e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000221,1.28e-14,44;CL:0000133,1.28e-14,44;CL:0002319,2.94e-14,43;CL:0000540,4.91e-14,33;CL:0000047,4.91e-14,33;CL:0000031,4.91e-14,33;CL:0000404,4.91e-14,33;CL:0000393,5.87e-09,39;CL:0000211,5.87e-09,39;CL:0000117,1.08e-08,23;CL:0000337,1.08e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.52e-31!102;UBERON:0000924!3.52e-31!102;UBERON:0006601!3.52e-31!102;UBERON:0000073!8.65e-30!75;UBERON:0001016!8.65e-30!75;UBERON:0001017!2.14e-28!73;UBERON:0005743!2.14e-28!73;UBERON:0002346!5.00e-26!71;UBERON:0003075!5.00e-26!71;UBERON:0007284!5.00e-26!71;UBERON:0000033!1.39e-23!63;UBERON:0003056!3.02e-22!49;UBERON:0001049!1.33e-20!52;UBERON:0005068!1.33e-20!52;UBERON:0006241!1.33e-20!52;UBERON:0007135!1.33e-20!52;UBERON:0000955!1.25e-19!50;UBERON:0006238!1.25e-19!50;UBERON:0002616!2.55e-19!49;UBERON:0003080!5.76e-18!40;UBERON:0002780!1.77e-17!39;UBERON:0001890!1.77e-17!39;UBERON:0006240!1.77e-17!39;UBERON:0002020!4.70e-16!34;UBERON:0002791!1.56e-14!29;UBERON:0003528!1.56e-14!29;UBERON:0001893!1.56e-14!29;UBERON:0000468!8.85e-13!333;UBERON:0000956!9.76e-11!21;UBERON:0001869!9.76e-11!21;UBERON:0000203!9.76e-11!21;UBERON:0000922!2.70e-10!328;UBERON:0004111!6.58e-10!122;UBERON:0000025!1.64e-09!114;UBERON:0002619!1.70e-09!17;UBERON:0007811!1.87e-08!86;UBERON:0000153!4.23e-08!94;UBERON:0000010!8.71e-08!11;UBERON:0002021!8.63e-07!10;UBERON:0000411!8.63e-07!10;UBERON:0001950!8.63e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.21e-31,95;UBERON:0000924,1.21e-31,95;UBERON:0006601,1.21e-31,95;UBERON:0001016,8.14e-30,75;UBERON:0001017,2.02e-28,73;UBERON:0002346,4.51e-27,64;UBERON:0003075,4.51e-27,64;UBERON:0007284,4.51e-27,64;UBERON:0010371,9.28e-26,73;UBERON:0003056,2.89e-22,49;UBERON:0000073,4.41e-21,54;UBERON:0001049,1.27e-20,52;UBERON:0005068,1.27e-20,52;UBERON:0006241,1.27e-20,52;UBERON:0007135,1.27e-20,52;UBERON:0000955,7.66e-19,47;UBERON:0006238,7.66e-19,47;UBERON:0002616,1.54e-18,46;UBERON:0003080,5.56e-18,40;UBERON:0002780,1.71e-17,39;UBERON:0001890,1.71e-17,39;UBERON:0006240,1.71e-17,39;UBERON:0002020,4.56e-16,34;UBERON:0010314,6.55e-15,92;UBERON:0003528,1.52e-14,29;UBERON:0002791,1.52e-14,29;UBERON:0001893,1.52e-14,29;UBERON:0000956,9.58e-11,21;UBERON:0001869,9.58e-11,21;UBERON:0000203,9.58e-11,21;UBERON:0004111,5.54e-10,122;UBERON:0000922,7.43e-10,320;UBERON:0000025,1.38e-09,114;UBERON:0002619,1.67e-09,17;UBERON:0000010,8.60e-08,11;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10
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7052241124984,20.1313476043061,11.5629532450238,14.143108957731,8.94066096515692,7.81270421879797,9.15675068482379,7.16861794631848,8.38274873204998,6.65452821903147,9.35595655101623,6.92725259810372,6.42822961998629,17.4582395383713,64.5979124318528,48.8940518521643,51.0369233746799,39.9902459646634,67.5656911624255,50.7329999220324,51.6627793580549,69.7185224609155,207.82867808308,201.622453590143,224.002145754804,221.862458405701,243.889377038349,222.085805832572,247.733257585073,201.743899044451,222.03978040226,217.459330935764,35.806634916541,66.2381289845711,65.2202373980792,57.859398662254,36.6823034598969,40.2617283505531,75.3416407247476,62.2225872861461,81.8343984459129,73.7875858350289,70.4672453694866,72.2438887508672,64.2380741243393,66.6501836534689,68.8651272777803,70.4914663098949,74.3977372565972,72.5338668943531,69.6425172357588,59.9099604946997,79.5456665534164,69.7479918206196,62.9471541460927,73.3999403993259,61.5475347916262,71.0762706290083,71.8906933389996,72.6072403568446,63.6921293937092,58.3587962524048,72.8419011282429,72.7948124755414,72.8431256842047,70.3413258984286,65.2024345116258,104.920442733937,64.5651239309327,69.4033504576004,42.6572980513521,38.8240897650347,42.6636817541576
|phase1_expression=94.4878197918284,1.74487703819681,3.18499467572675,0.90739263392049,0,2.35030980676646,1.16806320297763,1.16210991097419,0.281577444303333,4.44722600011788,0,0.159544317990673,0,0.437102012094987,27.6481102307,18.627724599864,13.2916756844348,8.3597473819933,12.4774134581222,11.4585205985468,91.4215369124,0,0,0.47997726838022,0.45881856213434,1.72269589234506,2.15380998079537,1.29282739611533,1.33016393619462,0.756090389279792,0.665191531965914,0,0,0,2.02196133825892,1.16364251750945,2.6542016314108,0.418531630736908,0,0,0,0.683045484958446,0.971020706062307,0,0,0,3.9119567217402,83.9396852064719,185.634824410629,149.32216248905,32.7568226603348,53.1884488150395,0.167782606057736,0,0.336093799142464,4.63066984864705,15.7593391966316,21.6582278756526,159.627687618223,180.914914911035,122.329460876693,16.2645375393183,8.89294796111139,172.330795859388,203.706470688797,161.278986092765,72.8028268559723,28.432154593795,112.503229354698,119.210243546883,108.10703013461,114.831695730329,119.04814357292,125.920541592973,112.810119388464,113.983129539643,116.722833859352,106.235865286876,106.756540613089,254.012990168353,225.15109090553,238.578323714996,97.434866651482,158.699056028934,154.631826750132,148.198178493255,125.856565826407,127.497220944506,206.883960186259,315.73797812615,99.4235196246755,32.6961073252927,33.9985666853875,42.6365521393876,70.1758530843483,62.2757373065296,42.5546592999208,0,0,0,139.15329873936,0,0,0,13.6389355837065,14.1881524666055,14.6602089054287,48.6423327603195,52.3054524967287,68.580268247949,57.423643159591,62.7198885323011,52.8109488716374,55.0137638017072,59.735063224938,31.5423144237485,7.41584903203122,13.013942122792,62.8073491884411,44.6476505854849,46.8184019136034,65.9430344263902,5.59175283654366,120.625688368757,162.321197780428,11.240110429178,0.838705871541442,0,0.635351135365324,187.987252453052,180.712738113357,224.16736416935,239.182264584572,241.139676262502,158.334489954385,187.713141369396,28.9223793334898,56.231950715762,30.8321765289083,140.996043443938,111.122858290149,104.835359621664,146.210449401944,148.594950386015,249.285732890465,228.042422107033,212.609213026025,348.990847126932,51.951886296815,54.6516571684998,51.729630504201,36.1672958505498,43.6534181284189,35.1734688187388,36.217656007798,24.8792833523116,0,0.772043721344145,0.568326998791185,22.5767092063697,16.6513502586578,14.2249028554202,16.8088762265499,15.9379027715397,12.3413690309903,9.99895962426754,13.413670069981,7.12268588439734,6.7469538464527,4.76085645829376,6.89084881139774,4.09359964790931,6.14740322814942,5.09984391289413,254.24054781403,307.273172564543,1.65209391491899,8.46241813323342,49.269585873639,66.8841614958063,57.0882853656873,55.6646527960425,40.0280478920767,31.7676795607974,16.1339880925134,26.0224348463937,24.1281800448259,26.0632978373908,25.5402954126047,11.6846523125049,10.3746263939853,10.3553462092271,59.7453888002207,66.149888801033,59.7350999067326,48.8763186828754,44.6090720485539,50.63806196081,17.8327034690406,13.1373031701846,11.303908404579,13.0800993757109,78.5599461780945,13.3476084572875,18.8696635308675,14.1663130802458,15.6202293469147,14.7118067448974,17.8238096246994,29.9203982948843,19.4562272130042,38.4385978463314,54.6319184803947,70.3346391093471,44.9334249284967,49.758038955581,43.7729688993466,66.5772059481447,235.560317462421,43.0145504719,69.423079964303,79.1012099712377,92.9373383222468,111.726673713691,143.778359095152,115.519119531817,199.88136272665,196.882109097761,221.163764127935,224.328877845845,207.740033184672,202.942629189861,392.057338242108,186.015743865999,36.3905562034087,33.6642830491774,128.119370810258,129.401701997792,0,12.6235463602186,209.181949472978,213.960431874558,294.914631496202,132.627682863666,222.353076734229,273.168852211223,279.724194857352,364.150798957495,445.489325745732,115.996995228272,31.3687588310274,32.4079398674405,49.0289747654264,66.1530193119867,18.5843193675948,31.0759214278376,34.7672090509464,26.5933162455816,25.3959627877465,37.5070880491592,25.5844010236539,42.8969800783456,40.2842037574735,24.018793603122,21.0837217149998,20.6271086496374,220.604864528455,87.6897527932481,66.2316460967703,140.176420910661,176.27619224042,113.442567994917,114.690667359678,81.5966063627126,9.38686832254841,8.68511490541663,69.686973785368,59.3590510589328,67.8150592122803,51.7484895883577,32.2305328808468,29.7095028538561,17.7803310344209,128.128883689262,39.8129152258997,16.5109494370578,18.3342582096015,22.0391094695488,23.7847956234584,22.1914828010327,1.01987057996313,1.11961161858926,1.65839968565309,18.1387417422872,66.7468946456196,48.5933526433168,48.4943980289888,39.9358645387635,34.0645599444037,35.0647300600534,43.310410800076,21.7257431846745,13.3503422490547,35.4163408459548,83.4265549252602,25.5673293735204,20.8477697975943,21.0007283411571,21.1822110503479,16.8956125490778,28.635166229564,82.9401931455962,189.690554066111,143.259383649822,131.341682853587,12.324433704499,22.7052241124984,20.1313476043061,11.5629532450238,14.143108957731,8.94066096515692,7.81270421879797,9.15675068482379,7.16861794631848,8.38274873204998,6.65452821903147,9.35595655101623,6.92725259810372,6.42822961998629,17.4582395383713,64.5979124318528,48.8940518521643,51.0369233746799,39.9902459646634,67.5656911624255,50.7329999220324,51.6627793580549,69.7185224609155,207.82867808308,201.622453590143,224.002145754804,221.862458405701,243.889377038349,222.085805832572,247.733257585073,201.743899044451,222.03978040226,217.459330935764,35.806634916541,66.2381289845711,65.2202373980792,57.859398662254,36.6823034598969,40.2617283505531,75.3416407247476,62.2225872861461,81.8343984459129,73.7875858350289,70.4672453694866,72.2438887508672,64.2380741243393,66.6501836534689,68.8651272777803,70.4914663098949,74.3977372565972,72.5338668943531,69.6425172357588,59.9099604946997,79.5456665534164,69.7479918206196,62.9471541460927,73.3999403993259,61.5475347916262,71.0762706290083,71.8906933389996,72.6072403568446,63.6921293937092,58.3587962524048,72.8419011282429,72.7948124755414,72.8431256842047,70.3413258984286,65.2024345116258,104.920442733937,64.5651239309327,69.4033504576004,42.6572980513521,38.8240897650347,42.6636817541576
|short_description=p1@Cadm1
|short_description=p1@Cadm1
}}
}}

Latest revision as of 18:32, 26 September 2015

Short description:p1@Cadm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cadm1_5end
Coexpression cluster:MCL_coexpression_mm9:979
Association with transcript: 0bp_to_ENSMUST00000124073, ENSMUST00000148925, NM_001025600, NM_018770, NM_207675, NM_207676, uc009phm.1, uc009phn.1, uc009pho.1, uc009php.1, uc009phq.1, uc009phr.1, uc009phs.1, uc012gsm.1_5end
EntrezGene:Cadm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cadm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G794.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A391.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C283.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8185.63
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3149.32
Mouse Astrocytes, donor2.CNhs12078.11552-120C432.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C453.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C3159.63
Mouse Granule cells, donor2.CNhs12357.11731-123E3180.91
Mouse Granule cells, donor3.CNhs12108.11636-122C7122.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7172.33
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7203.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2161.28
Mouse Microglia, donor1.CNhs12629.11718-123C872.80
Mouse Microglia, donor2.CNhs12634.11736-123E828.43
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5112.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5119.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9108.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1114.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5119.05
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2125.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2112.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6113.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3116.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3106.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7106.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4254.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4225.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8238.58
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E497.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5158.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6154.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6148.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6125.86
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1127.50
Mouse Schwann, donor1.CNhs12507.11728-123D9206.88
Mouse Schwann, donor2.CNhs12573.11746-123F9315.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G399.42
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C842.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F470.18
Mouse hepatocyte, donor8.CNhs13091.11824-124F662.28
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A742.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6139.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B648.64
accessory axillary lymph node, adult.CNhs10475.1063-29H952.31
adrenal gland, adult.CNhs10508.49-24D768.58
adrenal gland, embryo E14.CNhs11038.406-44C557.42
adrenal gland, embryo E16.CNhs11004.1254-43D662.72
adrenal gland, embryo E17.CNhs11043.1263-45I152.81
adrenal gland, embryo E18.CNhs11026.1262-18F555.01
adrenal gland, neonate N00.CNhs11191.1311-23C159.74
adrenal gland, neonate N25.CNhs11223.1377-27I331.54
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H113.01
bone (os femoris), adult.CNhs10483.56-12G262.81
bone (os femoris), neonate N02.CNhs11227.1985-43F544.65
bone (os femoris), neonate N16.CNhs11225.1525-43A646.82
bone (os femoris), neonate N20.CNhs11195.1350-25C365.94
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B2120.63
cerebellum, neonate N30.CNhs11135.1395-42I2162.32
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A4187.99
corpus striatum, adult.CNhs10487.19-21D8180.71
corpus striatum, neonate N00.CNhs11226.630-43F1224.17
cortex, adult.CNhs10473.12-14D5239.18
cortex, neonate N30.CNhs11107.1392-42F2241.14
diencephalon, adult.CNhs10482.20-12F2158.33
diencephalon, neonate N30.CNhs11201.1388-42B2187.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A256.23
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G4141.00
eyeball, embryo E12.CNhs11016.345-16C6111.12
eyeball, embryo E14.CNhs10521.399-16E2104.84
eyeball, embryo E15.CNhs10593.426-16C9146.21
eyeball, embryo E17.CNhs11023.1261-18D4148.59
eyeball, neonate N00.CNhs11207.633-15C6249.29
eyeball, neonate N01.CNhs11140.1532-43E7228.04
eyeball, neonate N02.CNhs11205.1551-44G8212.61
eyeball, neonate N16.CNhs11188.777-19A2348.99
forelimb, embryo E11.CNhs10596.335-25E251.95
forelimb, embryo E12.CNhs10600.359-14H254.65
forelimb, embryo E13.CNhs10589.384-1E251.73
forelimb, embryo E14.CNhs10577.413-26A836.17
forelimb, embryo E15.CNhs11007.437-20E743.65
forelimb, embryo E17.CNhs10598.1517-43C435.17
forelimb, embryo E18.CNhs11008.1520-43B536.22
gonad, embryo E13.CNhs11044.1564-45I624.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E922.58
heart, embryo E12.CNhs11015.353-12F516.65
heart, embryo E13.CNhs11013.376-3I914.22
heart, embryo E14.CNhs10597.403-26D416.81
heart, embryo E15.CNhs11017.431-16C815.94
heart, embryo E16.CNhs11021.457-17C612.34
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G313.41
heart, neonate N00.CNhs11213.639-21E37.12
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G16.89
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E8254.24
hippocampus, neonate N00.CNhs11228.627-43G1307.27
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I549.27
intestine, embryo E13.CNhs11010.381-16D566.88
intestine, embryo E15.CNhs10602.976-16D857.09
intestine, embryo E16.CNhs10585.463-22H455.66
intestine, embryo E17.CNhs10582.482-18D340.03
intestine, embryo E18.CNhs10526.1289-20F731.77
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E926.02
intestine, neonate N06.CNhs11102.688-20B824.13
intestine, neonate N07.CNhs11095.720-20F226.06
intestine, neonate N10.CNhs11098.755-23A525.54
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I959.75
kidney, embryo E15.CNhs10997.434-16F866.15
kidney, embryo E16.CNhs10584.464-22A559.74
kidney, embryo E17.CNhs11028.483-18I248.88
kidney, embryo E18.CNhs11001.1288-20C744.61
kidney, neonate N00.CNhs11214.646-21G750.64
kidney, neonate N10.CNhs11206.758-6D517.83
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F311.30
kidney, neonate N30.CNhs11203.1385-42H113.08
liver, adult pregnant day01.CNhs10466.508-5B278.56
liver, embryo E12.CNhs10601.355-15F813.35
liver, embryo E13.CNhs10524.378-3H618.87
liver, embryo E14.CNhs10594.409-16E114.17
liver, embryo E15.CNhs10520.433-16D715.62
liver, embryo E16.CNhs10523.462-17F514.71
liver, embryo E17.CNhs10510.481-18A317.82
liver, embryo E18.CNhs10579.499-43G429.92
liver, neonate N00.CNhs11117.641-24F419.46
liver, neonate N03.CNhs11123.1345-25G238.44
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H270.33
liver, neonate N10.CNhs11115.751-24B944.93
liver, neonate N20.CNhs11220.823-25A349.76
liver, neonate N25.CNhs11198.1368-26H143.77
liver, neonate N30.CNhs11106.1382-42D166.58
lung, adult.CNhs10474.28-22B1235.56
lung, embryo E12.CNhs10522.354-16G243.01
lung, embryo E14.CNhs10604.404-26F869.42
lung, embryo E15.CNhs11020.432-17C579.10
lung, embryo E16.CNhs10998.458-17B692.94
lung, embryo E17.CNhs10605.480-44A6111.73
lung, embryo E18.CNhs10583.1287-20I6143.78
lung, neonate N00.CNhs11224.640-42C6115.52
lung, neonate N06.CNhs11212.683-20E5199.88
lung, neonate N07.CNhs11111.715-19A3196.88
lung, neonate N10.CNhs11219.750-23E6221.16
lung, neonate N20.CNhs11109.822-18A4224.33
lung, neonate N25.CNhs11119.1359-25C7207.74
lung, neonate N30.CNhs11133.1394-42H2202.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1392.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1186.02
mammary gland, adult lactating day02.CNhs10480.595-22B636.39
mammary gland, adult pregnant day19.CNhs10476.588-5H233.66
medulla oblongata, adult.CNhs10477.17-12C2128.12
medulla oblongata, neonate N30.CNhs11200.1396-42A3129.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1209.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2213.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3294.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7132.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8222.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9273.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4279.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5364.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6445.49
olfactory brain, adult.CNhs10489.18-22I9116.00
ovary, adult.CNhs10507.91-2I731.37
ovary, embryo E18.CNhs11040.505-44H732.41
ovary, neonate N00.CNhs11217.1299-22I449.03
oviduct, adult pregnant day01.CNhs10500.988-6G666.15
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F431.08
pancreas, embryo E15.CNhs11042.1556-45F234.77
pancreas, embryo E16.CNhs11003.460-26E526.59
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I737.51
pancreas, neonate N00.CNhs11105.645-26G925.58
pancreas, neonate N01.CNhs11138.1531-43D742.90
pancreas, neonate N02.CNhs11139.1539-43D840.28
pancreas, neonate N16.CNhs11136.787-43B624.02
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G8220.60
pituitary gland, embryo E12.CNhs11018.346-16E687.69
pituitary gland, embryo E13.CNhs11009.370-44C766.23
pituitary gland, embryo E14.CNhs11037.398-44A5140.18
pituitary gland, embryo E15.CNhs10592.427-16B9176.28
pituitary gland, embryo E16.CNhs11036.449-43F6113.44
pituitary gland, embryo E17.CNhs11039.1265-44F5114.69
pituitary gland, neonate N00.CNhs11190.1308-22E981.60
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G38.69
prostate, adult.CNhs10470.859-1F869.69
skin, adult.CNhs10492.30-1C359.36
skin, neonate N00.CNhs11124.650-25G467.82
skin, neonate N03.CNhs11215.662-22H351.75
skin, neonate N06.CNhs11097.693-20I532.23
skin, neonate N10.CNhs11108.762-6C429.71
small intestine, neonate N16.CNhs11114.790-21I117.78
spinal cord, adult.CNhs10505.24-13C9128.13
spleen, adult.CNhs10465.25-2G239.81
spleen, embryo E16.CNhs11035.461-43C116.51
spleen, embryo E18.CNhs11011.1271-21F218.33
spleen, neonate N10.CNhs11116.752-24D122.04
spleen, neonate N20.CNhs11112.824-19H123.78
spleen, neonate N25.CNhs11099.1354-25G322.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E366.75
stomach, embryo E15.CNhs10603.1252-16G848.59
stomach, embryo E16.CNhs11022.459-17D448.49
stomach, embryo E17.CNhs11006.1035-18D539.94
stomach, embryo E18.CNhs10999.1286-20C634.06
stomach, neonate N03.CNhs11193.1340-24B835.06
stomach, neonate N07.CNhs11210.718-18A943.31
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I113.35
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G583.43
testis, embryo E13.CNhs11031.389-23F525.57
testis, embryo E15.CNhs11034.443-27C520.85
testis, embryo E16.CNhs11033.470-26G521.00
testis, embryo E17.CNhs11029.486-18I521.18
testis, embryo E18.CNhs11027.503-18G516.90
testis, neonate N00.CNhs11189.1300-22B728.64
testis, neonate N07.CNhs11222.726-26I482.94
testis, neonate N10.CNhs11204.763-44D9189.69
testis, neonate N20.CNhs11110.839-18H3143.26
testis, neonate N30.CNhs11130.1391-42E2131.34
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I422.71
thymus, embryo E15.CNhs11005.430-45I220.13
thymus, embryo E16.CNhs11002.456-26C511.56
thymus, embryo E17.CNhs10581.478-18C114.14
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C79.16
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D38.38
thymus, neonate N10.CNhs11194.748-24E46.65
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B417.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H364.60
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F748.89
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G551.04
urinary bladder, adult.CNhs10481.879-12E439.99
uterus, adult pregnant day19.CNhs10497.590-15F567.57
uterus, adult.CNhs10509.92-27E550.73
vagina, adult.CNhs10502.89-27D551.66
vesicular gland, adult.CNhs10491.51-27F869.72
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1207.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2201.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3224.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7221.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4243.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5222.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6247.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7201.74
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8222.04
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9217.46
whole body, embryo E11.CNhs11014.324-5I835.81
whole body, embryo E12.CNhs10587.857-27C966.24
whole body, embryo E13.CNhs10512.372-23H265.22
whole body, embryo E14.5.CNhs10578.420-27D257.86
whole body, embryo E14.CNhs10519.395-14B136.68
whole body, embryo E16.CNhs10514.453-14F240.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G575.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G562.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G581.83
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G573.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G570.47
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G572.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G564.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G566.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G568.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G570.49
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G574.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G572.53
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G569.64
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G559.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G579.55
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G569.75
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G562.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G573.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G561.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G571.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G571.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G572.61
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G563.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G558.36
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G572.84
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G572.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G572.84
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G570.34
whole body, embryo E17.5.CNhs10513.490-9F965.20
whole body, embryo E17.CNhs10517.475-3I5104.92
whole body, embryo E18.CNhs10516.493-3B364.57
whole body, neonate N00.CNhs10525.657-19C269.40
whole body, neonate N01.CNhs10576.659-23C642.66
whole body, neonate N06.CNhs10515.692-21D138.82
whole body, neonate N10.CNhs10518.761-6B442.66





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.28e-1444
neurectodermal cell1.28e-1444
neural cell2.94e-1443
neuron4.91e-1433
neuronal stem cell4.91e-1433
neuroblast4.91e-1433
electrically signaling cell4.91e-1433
electrically responsive cell5.87e-0939
electrically active cell5.87e-0939
CNS neuron (sensu Vertebrata)1.08e-0823
neuroblast (sensu Vertebrata)1.08e-0823

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.21e-3195
ectoderm1.21e-3195
presumptive ectoderm1.21e-3195
nervous system8.14e-3075
central nervous system2.02e-2873
neurectoderm4.51e-2764
neural plate4.51e-2764
presumptive neural plate4.51e-2764
ecto-epithelium9.28e-2673
pre-chordal neural plate2.89e-2249
regional part of nervous system4.41e-2154
neural tube1.27e-2052
neural rod1.27e-2052
future spinal cord1.27e-2052
neural keel1.27e-2052
brain7.66e-1947
future brain7.66e-1947
regional part of brain1.54e-1846
anterior neural tube5.56e-1840
regional part of forebrain1.71e-1739
forebrain1.71e-1739
future forebrain1.71e-1739
gray matter4.56e-1634
structure with developmental contribution from neural crest6.55e-1592
brain grey matter1.52e-1429
regional part of telencephalon1.52e-1429
telencephalon1.52e-1429
cerebral cortex9.58e-1121
cerebral hemisphere9.58e-1121
pallium9.58e-1121
anatomical conduit5.54e-10122
embryo7.43e-10320
tube1.38e-09114
regional part of cerebral cortex1.67e-0917
peripheral nervous system8.60e-0811
occipital lobe8.53e-0710
visual cortex8.53e-0710
neocortex8.53e-0710
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