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FFCP PHASE1:Mm9::chr17:5975802..5975830,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20975
|EntrezGene=20975
|HGNC=
|HGNC=
|MCL_coexpression_id=547
|MCL_coexpression_id=547
|TSSclassifier=NA
|UniProt=D3YZB2
|UniProt=D3YZB2
|association_with_transcript=62bp_to_ENSMUST00000115790_5end
|association_with_transcript=62bp_to_ENSMUST00000115790_5end
|cluster_id=chr17:5975802..5975830,+
|description=CAGE_peak_3_at_Synj2_5end
|description=CAGE_peak_3_at_Synj2_5end
|id=chr17:5975802..5975830,+
|id=chr17:5975802..5975830,+
|ontology_enrichment_celltype=CL:0000791!2.50e-07!9;CL:0000789!2.50e-07!9;CL:0002420!2.50e-07!9;CL:0002419!2.50e-07!9;CL:0000790!2.50e-07!9;CL:0000838!4.46e-07!12
|ontology_enrichment_celltype=CL:0000791!2.50e-07!9;CL:0000789!2.50e-07!9;CL:0002420!2.50e-07!9;CL:0002419!2.50e-07!9;CL:0000790!2.50e-07!9;CL:0000838!4.46e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000791,1.64e-13,9;CL:0000789,1.64e-13,9;CL:0002420,1.64e-13,9;CL:0002419,1.64e-13,9;CL:0000790,1.64e-13,9;CL:0000624,3.23e-12,8;CL:0000838,2.26e-11,12;CL:0000084,1.29e-10,11;CL:0000827,1.29e-10,11;CL:0000542,2.71e-10,13;CL:0000051,2.71e-10,13;CL:0000893,3.41e-09,6;CL:0002489,3.41e-09,6;CL:0000898,3.41e-09,6;CL:0000809,3.41e-09,6;CL:0000810,3.41e-09,6;CL:0000895,3.41e-09,6;CL:0000808,3.41e-09,6;CL:0000894,3.41e-09,6;CL:0000806,3.41e-09,6;CL:0000807,3.41e-09,6;CL:0000805,3.41e-09,6;CL:0002425,3.41e-09,6;CL:0002436,3.41e-09,6;CL:0002427,3.41e-09,6;CL:0002428,3.41e-09,6;CL:0002429,3.41e-09,6;CL:0002433,3.41e-09,6;CL:0002431,3.41e-09,6;CL:0002432,3.41e-09,6;CL:0002031,2.75e-07,25;CL:0000738,2.88e-07,17;CL:0002087,2.88e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!2.85e-08!10;UBERON:0000411!2.85e-08!10;UBERON:0001950!2.85e-08!10;UBERON:0000065!6.68e-08!41;UBERON:0001004!2.26e-07!42;UBERON:0002193!7.90e-07!48
|ontology_enrichment_uberon=UBERON:0002021!2.85e-08!10;UBERON:0000411!2.85e-08!10;UBERON:0001950!2.85e-08!10;UBERON:0000065!6.68e-08!41;UBERON:0001004!2.26e-07!42;UBERON:0002193!7.90e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.87e-15,10;UBERON:0000411,1.87e-15,10;UBERON:0001950,1.87e-15,10;UBERON:0000065,3.68e-13,41;UBERON:0002370,8.99e-13,23;UBERON:0000974,8.99e-13,23;UBERON:0004807,8.99e-13,23;UBERON:0005058,8.99e-13,23;UBERON:0003351,8.99e-13,23;UBERON:0009113,8.99e-13,23;UBERON:0003295,8.99e-13,23;UBERON:0009722,8.99e-13,23;UBERON:0005562,8.99e-13,23;UBERON:0007690,8.99e-13,23;UBERON:0001004,1.10e-12,42;UBERON:0006562,4.77e-12,24;UBERON:0003408,4.77e-12,24;UBERON:0001557,4.77e-12,24;UBERON:0001042,4.77e-12,24;UBERON:0008814,4.77e-12,24;UBERON:0009145,4.77e-12,24;UBERON:0000072,1.49e-11,27;UBERON:0002619,9.40e-10,17;UBERON:0004177,3.39e-09,29;UBERON:0005057,3.39e-09,29;UBERON:0000956,6.10e-09,21;UBERON:0001869,6.10e-09,21;UBERON:0000203,6.10e-09,21;UBERON:0002193,4.65e-07,48;UBERON:0002405,4.65e-07,48;UBERON:0000077,6.81e-07,35;UBERON:0002390,7.17e-07,45;UBERON:0003061,7.17e-07,45;UBERON:0000073,8.38e-07,54
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,19.2393751927949,10.2775767170717,6.08567768437183,5.13653904676515,2.07407613387875,13.6960583944965,9.00430144915673,0.333109761815663,0.607425802169478,0,2.5236973228659,2.4680598049033,2.97072756258621,1.44573593256819,0.297872853602656,0.261199789138935,0.799962113967033,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0.7813353445238,2.61761871986899,0.588231488031014,1.36609096991689,2.42755176515577,1.51076181570693,2.02753862439029,0,0,0,0,0.194429899074283,0,0,1.34226084846189,15.9579671242496,6.72187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,3.19218345212969,2.61131106535614,0,0,0,0.558365998002762,0,0.916789486660861,0.589257170947335,0.284743361598206,0,0.908714319998209,0.68014404096107,0.869593466105033,0,0,0,0,0,0.421333260395256,0.511290967734173,0,1.06001872353102,0,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.22836775943812,5.95557132388495,0.445326417194474,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.376999773989026,0.247194967734374,0.433798070759735,0,0,0,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0.599902730993408,0.381210681219194,1.19832511523858,2.28750301409313,0.502617408451458,14.7750672163435,7.92717917724025,2.90903262383384,4.05603157669394,0.305518091550949,0.497627882440372,0.505445516867349,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.696504333044333,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.658650345873152,0.536825675041487,9.04246778825747,0.617427674275707,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0.837531287209079,0.238043640886014,0.585400943573396,1.57635144106191,2.6575762757853,1.2756381492599,1.14704320301017,1.89953480052485,1.59113964439663,0,0,0,0.551873492609465,1.44495530989013,1.75817529888305,0.819674726883377,0,0,0,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.63549621259146,0.882113592219848,1.81374878235628,0.645857706783622,0.361877549568935,0.358117032009409,0.164140899745061,0,1.48340241608408,0,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0.457556346413045,0,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0,0,2.21207784439725,0,0.205421914329655,0.129920822977795,0.895133478337407,1.58945083825012,4.56742708175882,4.43068581523732,4.2405908978222,5.71551049912499,2.92395936896837,3.70339946811059,2.79014340756955,5.72696820689688,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,1.50471631210609,7.34177395402186,5.52390283808612,9.16632821503035,8.59265911718438,10.2762377965596,7.55393897389701,12.1504050041725,14.4102785031751,24.0165476761628,12.9440077937955,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0,0,1.01391719956096,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0.282328141245992,0,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0.661774257358546,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,19.2393751927949,10.2775767170717,6.08567768437183,5.13653904676515,2.07407613387875,13.6960583944965,9.00430144915673,0.333109761815663,0.607425802169478,0,2.5236973228659,2.4680598049033,2.97072756258621,1.44573593256819,0.297872853602656,0.261199789138935,0.799962113967033,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0.7813353445238,2.61761871986899,0.588231488031014,1.36609096991689,2.42755176515577,1.51076181570693,2.02753862439029,0,0,0,0,0.194429899074283,0,0,1.34226084846189,15.9579671242496,6.72187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,3.19218345212969,2.61131106535614,0,0,0,0.558365998002762,0,0.916789486660861,0.589257170947335,0.284743361598206,0,0.908714319998209,0.68014404096107,0.869593466105033,0,0,0,0,0,0.421333260395256,0.511290967734173,0,1.06001872353102,0,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.22836775943812,5.95557132388495,0.445326417194474,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.376999773989026,0.247194967734374,0.433798070759735,0,0,0,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0.599902730993408,0.381210681219194,1.19832511523858,2.28750301409313,0.502617408451458,14.7750672163435,7.92717917724025,2.90903262383384,4.05603157669394,0.305518091550949,0.497627882440372,0.505445516867349,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.696504333044333,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.658650345873152,0.536825675041487,9.04246778825747,0.617427674275707,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0.837531287209079,0.238043640886014,0.585400943573396,1.57635144106191,2.6575762757853,1.2756381492599,1.14704320301017,1.89953480052485,1.59113964439663,0,0,0,0.551873492609465,1.44495530989013,1.75817529888305,0.819674726883377,0,0,0,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.63549621259146,0.882113592219848,1.81374878235628,0.645857706783622,0.361877549568935,0.358117032009409,0.164140899745061,0,1.48340241608408,0,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0.457556346413045,0,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0,0,2.21207784439725,0,0.205421914329655,0.129920822977795,0.895133478337407,1.58945083825012,4.56742708175882,4.43068581523732,4.2405908978222,5.71551049912499,2.92395936896837,3.70339946811059,2.79014340756955,5.72696820689688,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,1.50471631210609,7.34177395402186,5.52390283808612,9.16632821503035,8.59265911718438,10.2762377965596,7.55393897389701,12.1504050041725,14.4102785031751,24.0165476761628,12.9440077937955,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0,0,1.01391719956096,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0.282328141245992,0,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0.661774257358546,0.231867835620421
|short_description=p3@Synj2
|short_description=p3@Synj2
}}
}}

Latest revision as of 18:32, 26 September 2015

Short description:p3@Synj2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Synj2_5end
Coexpression cluster:MCL_coexpression_mm9:547
Association with transcript: 62bp_to_ENSMUST00000115790_5end
EntrezGene:Synj2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Synj2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F84.57
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C44.24
thymus, neonate N07.CNhs11211.713-19D35.72
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.64e-139
alpha-beta T cell1.64e-139
immature T cell1.64e-139
mature T cell1.64e-139
immature alpha-beta T cell1.64e-139
CD4-positive, alpha-beta T cell3.23e-128
lymphoid lineage restricted progenitor cell2.26e-1112
T cell1.29e-1011
pro-T cell1.29e-1011
lymphocyte2.71e-1013
common lymphoid progenitor2.71e-1013
thymocyte3.41e-096
double negative thymocyte3.41e-096
naive T cell3.41e-096
double-positive, alpha-beta thymocyte3.41e-096
CD4-positive, alpha-beta thymocyte3.41e-096
naive thymus-derived CD4-positive, alpha-beta T cell3.41e-096
DN4 thymocyte3.41e-096
DN1 thymic pro-T cell3.41e-096
DN2 thymocyte3.41e-096
DN3 thymocyte3.41e-096
immature single positive thymocyte3.41e-096
early T lineage precursor3.41e-096
mature CD4 single-positive thymocyte3.41e-096
resting double-positive thymocyte3.41e-096
double-positive blast3.41e-096
CD69-positive double-positive thymocyte3.41e-096
CD69-positive, CD4-positive single-positive thymocyte3.41e-096
CD4-positive, CD8-intermediate double-positive thymocyte3.41e-096
CD24-positive, CD4 single-positive thymocyte3.41e-096
hematopoietic lineage restricted progenitor cell2.75e-0725
leukocyte2.88e-0717
nongranular leukocyte2.88e-0717

Uber anatomy
Ontology termp-valuen
occipital lobe1.87e-1510
visual cortex1.87e-1510
neocortex1.87e-1510
respiratory tract3.68e-1341
thymus8.99e-1323
neck8.99e-1323
respiratory system epithelium8.99e-1323
hemolymphoid system gland8.99e-1323
pharyngeal epithelium8.99e-1323
thymic region8.99e-1323
pharyngeal gland8.99e-1323
entire pharyngeal arch endoderm8.99e-1323
thymus primordium8.99e-1323
early pharyngeal endoderm8.99e-1323
respiratory system1.10e-1242
pharynx4.77e-1224
gland of gut4.77e-1224
upper respiratory tract4.77e-1224
chordate pharynx4.77e-1224
pharyngeal arch system4.77e-1224
pharyngeal region of foregut4.77e-1224
segment of respiratory tract1.49e-1127
regional part of cerebral cortex9.40e-1017
hemopoietic organ3.39e-0929
immune organ3.39e-0929
cerebral cortex6.10e-0921
cerebral hemisphere6.10e-0921
pallium6.10e-0921
hemolymphoid system4.65e-0748
immune system4.65e-0748
mixed endoderm/mesoderm-derived structure6.81e-0735
hematopoietic system7.17e-0745
blood island7.17e-0745
regional part of nervous system8.38e-0754
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