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FFCP PHASE1:Mm9::chr9:4795561..4795644,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14802
|EntrezGene=14802
|HGNC=
|HGNC=
|MCL_coexpression_id=281
|TSSclassifier=NA
|UniProt=G5E863
|UniProt=G5E863
|association_with_transcript=-42bp_to_ENSMUST00000171931_5end
|association_with_transcript=-42bp_to_ENSMUST00000171931_5end
|cluster_id=chr9:4795561..4795644,-
|description=CAGE_peak_3_at_Gria4_5end
|description=CAGE_peak_3_at_Gria4_5end
|id=chr9:4795561..4795644,-
|id=chr9:4795561..4795644,-
|ontology_enrichment_celltype=CL:0000540!4.60e-17!33;CL:0000047!4.60e-17!33;CL:0000031!4.60e-17!33;CL:0000404!4.60e-17!33;CL:0000393!9.68e-16!39;CL:0000211!9.68e-16!39;CL:0000221!8.11e-12!44;CL:0000133!8.11e-12!44;CL:0002319!1.33e-11!43;CL:0000055!1.38e-10!50;CL:0000117!1.65e-10!23;CL:0000337!1.65e-10!23;CL:0000107!5.82e-08!9
|ontology_enrichment_celltype=CL:0000540!4.60e-17!33;CL:0000047!4.60e-17!33;CL:0000031!4.60e-17!33;CL:0000404!4.60e-17!33;CL:0000393!9.68e-16!39;CL:0000211!9.68e-16!39;CL:0000221!8.11e-12!44;CL:0000133!8.11e-12!44;CL:0002319!1.33e-11!43;CL:0000055!1.38e-10!50;CL:0000117!1.65e-10!23;CL:0000337!1.65e-10!23;CL:0000107!5.82e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.80e-20,33;CL:0000047,1.80e-20,33;CL:0000031,1.80e-20,33;CL:0000404,1.80e-20,33;CL:0000393,2.12e-15,39;CL:0000211,2.12e-15,39;CL:0000221,6.14e-14,44;CL:0000133,6.14e-14,44;CL:0002319,1.14e-13,43;CL:0000117,2.71e-12,23;CL:0000337,2.71e-12,23;CL:0000107,1.33e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.24e-27!73;UBERON:0005743!2.24e-27!73;UBERON:0004121!6.01e-27!102;UBERON:0000924!6.01e-27!102;UBERON:0006601!6.01e-27!102;UBERON:0000073!6.34e-27!75;UBERON:0001016!6.34e-27!75;UBERON:0002346!1.10e-24!71;UBERON:0003075!1.10e-24!71;UBERON:0007284!1.10e-24!71;UBERON:0000033!2.16e-19!63;UBERON:0001049!9.44e-19!52;UBERON:0005068!9.44e-19!52;UBERON:0006241!9.44e-19!52;UBERON:0007135!9.44e-19!52;UBERON:0000955!1.95e-17!50;UBERON:0006238!1.95e-17!50;UBERON:0003056!8.28e-17!49;UBERON:0002616!1.08e-16!49;UBERON:0002020!4.81e-16!34;UBERON:0003080!6.34e-14!40;UBERON:0002780!2.62e-13!39;UBERON:0001890!2.62e-13!39;UBERON:0006240!2.62e-13!39;UBERON:0002791!6.38e-13!29;UBERON:0003528!6.38e-13!29;UBERON:0001893!6.38e-13!29;UBERON:0000956!7.10e-09!21;UBERON:0001869!7.10e-09!21;UBERON:0000203!7.10e-09!21;UBERON:0002619!2.16e-08!17;UBERON:0002021!2.78e-08!10;UBERON:0000411!2.78e-08!10;UBERON:0001950!2.78e-08!10;UBERON:0007811!5.11e-08!86;UBERON:0002410!5.82e-08!9;UBERON:0000010!6.47e-07!11
|ontology_enrichment_uberon=UBERON:0001017!2.24e-27!73;UBERON:0005743!2.24e-27!73;UBERON:0004121!6.01e-27!102;UBERON:0000924!6.01e-27!102;UBERON:0006601!6.01e-27!102;UBERON:0000073!6.34e-27!75;UBERON:0001016!6.34e-27!75;UBERON:0002346!1.10e-24!71;UBERON:0003075!1.10e-24!71;UBERON:0007284!1.10e-24!71;UBERON:0000033!2.16e-19!63;UBERON:0001049!9.44e-19!52;UBERON:0005068!9.44e-19!52;UBERON:0006241!9.44e-19!52;UBERON:0007135!9.44e-19!52;UBERON:0000955!1.95e-17!50;UBERON:0006238!1.95e-17!50;UBERON:0003056!8.28e-17!49;UBERON:0002616!1.08e-16!49;UBERON:0002020!4.81e-16!34;UBERON:0003080!6.34e-14!40;UBERON:0002780!2.62e-13!39;UBERON:0001890!2.62e-13!39;UBERON:0006240!2.62e-13!39;UBERON:0002791!6.38e-13!29;UBERON:0003528!6.38e-13!29;UBERON:0001893!6.38e-13!29;UBERON:0000956!7.10e-09!21;UBERON:0001869!7.10e-09!21;UBERON:0000203!7.10e-09!21;UBERON:0002619!2.16e-08!17;UBERON:0002021!2.78e-08!10;UBERON:0000411!2.78e-08!10;UBERON:0001950!2.78e-08!10;UBERON:0007811!5.11e-08!86;UBERON:0002410!5.82e-08!9;UBERON:0000010!6.47e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-33,73;UBERON:0001016,1.06e-31,75;UBERON:0004121,2.68e-28,95;UBERON:0000924,2.68e-28,95;UBERON:0006601,2.68e-28,95;UBERON:0002346,7.01e-27,64;UBERON:0003075,7.01e-27,64;UBERON:0007284,7.01e-27,64;UBERON:0000073,3.88e-23,54;UBERON:0010371,9.19e-23,73;UBERON:0001049,9.52e-22,52;UBERON:0005068,9.52e-22,52;UBERON:0006241,9.52e-22,52;UBERON:0007135,9.52e-22,52;UBERON:0002020,7.46e-19,34;UBERON:0000955,4.81e-18,47;UBERON:0006238,4.81e-18,47;UBERON:0010314,2.19e-17,92;UBERON:0003056,2.29e-17,49;UBERON:0002616,3.71e-17,46;UBERON:0003080,2.48e-15,40;UBERON:0003528,5.67e-15,29;UBERON:0002791,5.67e-15,29;UBERON:0001893,5.67e-15,29;UBERON:0002780,1.39e-14,39;UBERON:0001890,1.39e-14,39;UBERON:0006240,1.39e-14,39;UBERON:0002021,5.26e-10,10;UBERON:0000411,5.26e-10,10;UBERON:0001950,5.26e-10,10;UBERON:0000956,5.94e-10,21;UBERON:0001869,5.94e-10,21;UBERON:0000203,5.94e-10,21;UBERON:0002619,8.56e-10,17;UBERON:0002410,1.33e-09,9;UBERON:0000010,3.13e-07,11;UBERON:0003076,3.44e-07,12;UBERON:0003057,3.44e-07,12
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.550640256485045,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0.573066879877513,0.515672092277442,2.63011399117477,7.40587370980846,3.1691570175309,0,0,0,0,0,0,0,1.55534418462716,0.135005938331691,1.26194976810829,12.5686433137674,9.718215801871,3.42974237801871,1.91690942036473,3.67687514644008,8.8092704799511,9.83192503255945,14.7462271925994,6.06676923558892,4.57438218012048,9.37644067002168,8.37548997004143,10.6924895906019,12.2238598221448,22.9810296669461,22.7794689278565,16.2167517868012,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,1.56136794089522,2.74018930480927,1.15307748628029,2.56228488939458,1.76383060703557,0,0,0.144599356919912,0,0,0,0,0,24.8863677459815,35.6059401582874,0,0,0,0,18.8736205650077,13.2675174817402,6.15706325353036,17.2086076990354,18.9229438424445,9.55825004973976,17.6842976743856,0.509196819251581,0,0.252722758433675,1.26265113531884,0.780722657776222,0.919608417733892,2.70093194708024,3.61691562805716,4.55844544313897,5.76511741281824,4.77878795254617,13.4525752784288,0,0,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,9.2527577368216,3.91037527041281,0,0,0.213288250535234,0.928946687441754,0.38660238396628,1.21010114774006,0.889512175379481,1.14135375667535,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0,0,0.379335801906163,2.62771579002376,2.25415471346161,3.25842124552503,2.71533482034676,0.631222379012867,1.58091342810643,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6238684385839,15.9407893765396,0,0,28.3957397474631,35.9203644752907,31.8826628644542,22.941004603445,24.5078541490634,18.3999745012741,23.8838313988188,22.503701059171,30.0418711239358,29.8828824272281,0.141940085208269,0,1.14020871547503,0.824850614862677,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,6.46835250932197,1.26042765821917,0.388076051348264,0,0.709360934569094,1.42695054081656,2.63278432963394,0,0,0,0.220528398054962,0,0.484393280087717,0.180938774784468,0.119372344003136,0.328281799490123,0,15.9465759729038,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,1.40406943068342,1.04544148007234,1.31017538247707,0.134864346384821,0.41326727862668,0.26175594198403,0,0,0,0.149516546043979,0,1.55560950675238,0.516639293910924,1.85851738039856,1.29092962510329,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0.36630324853453,0,0,19.2015626489803,26.6988637174163,19.4784474569395,9.96748457593388,19.8673930733486,21.9064230243013,27.675922509504,27.9199145999017,25.8291173120997,27.4412965228465,0.62272408550506,3.59122386060928,2.21953687480374,2.67417388775123,2.30574478890781,1.47074806760011,2.889207461421,4.12070114477788,4.81378814387723,4.80124702351215,6.08350319736575,5.09291121742406,3.65201879132541,2.88113185821912,3.50356360629241,5.23923060411381,3.24476112645595,4.43691207066522,1.23625770240992,2.79677948255355,3.42869252385415,4.79184676630211,3.57654284920981,4.50573891560218,3.3879376949519,2.96151127620868,3.29270351170991,4.47218509444333,4.34573164306758,3.92799590160417,3.32178050747688,2.9551344712669,4.91077251803627,3.56354734727722,0.964533054905707,3.74715866906919,2.10538447600868,1.71896843238639,0.765153328275374,1.10295709559758,0.463735671240843
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.550640256485045,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0.573066879877513,0.515672092277442,2.63011399117477,7.40587370980846,3.1691570175309,0,0,0,0,0,0,0,1.55534418462716,0.135005938331691,1.26194976810829,12.5686433137674,9.718215801871,3.42974237801871,1.91690942036473,3.67687514644008,8.8092704799511,9.83192503255945,14.7462271925994,6.06676923558892,4.57438218012048,9.37644067002168,8.37548997004143,10.6924895906019,12.2238598221448,22.9810296669461,22.7794689278565,16.2167517868012,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,1.56136794089522,2.74018930480927,1.15307748628029,2.56228488939458,1.76383060703557,0,0,0.144599356919912,0,0,0,0,0,24.8863677459815,35.6059401582874,0,0,0,0,18.8736205650077,13.2675174817402,6.15706325353036,17.2086076990354,18.9229438424445,9.55825004973976,17.6842976743856,0.509196819251581,0,0.252722758433675,1.26265113531884,0.780722657776222,0.919608417733892,2.70093194708024,3.61691562805716,4.55844544313897,5.76511741281824,4.77878795254617,13.4525752784288,0,0,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,9.2527577368216,3.91037527041281,0,0,0.213288250535234,0.928946687441754,0.38660238396628,1.21010114774006,0.889512175379481,1.14135375667535,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0,0,0.379335801906163,2.62771579002376,2.25415471346161,3.25842124552503,2.71533482034676,0.631222379012867,1.58091342810643,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6238684385839,15.9407893765396,0,0,28.3957397474631,35.9203644752907,31.8826628644542,22.941004603445,24.5078541490634,18.3999745012741,23.8838313988188,22.503701059171,30.0418711239358,29.8828824272281,0.141940085208269,0,1.14020871547503,0.824850614862677,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,6.46835250932197,1.26042765821917,0.388076051348264,0,0.709360934569094,1.42695054081656,2.63278432963394,0,0,0,0.220528398054962,0,0.484393280087717,0.180938774784468,0.119372344003136,0.328281799490123,0,15.9465759729038,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,1.40406943068342,1.04544148007234,1.31017538247707,0.134864346384821,0.41326727862668,0.26175594198403,0,0,0,0.149516546043979,0,1.55560950675238,0.516639293910924,1.85851738039856,1.29092962510329,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0.36630324853453,0,0,19.2015626489803,26.6988637174163,19.4784474569395,9.96748457593388,19.8673930733486,21.9064230243013,27.675922509504,27.9199145999017,25.8291173120997,27.4412965228465,0.62272408550506,3.59122386060928,2.21953687480374,2.67417388775123,2.30574478890781,1.47074806760011,2.889207461421,4.12070114477788,4.81378814387723,4.80124702351215,6.08350319736575,5.09291121742406,3.65201879132541,2.88113185821912,3.50356360629241,5.23923060411381,3.24476112645595,4.43691207066522,1.23625770240992,2.79677948255355,3.42869252385415,4.79184676630211,3.57654284920981,4.50573891560218,3.3879376949519,2.96151127620868,3.29270351170991,4.47218509444333,4.34573164306758,3.92799590160417,3.32178050747688,2.9551344712669,4.91077251803627,3.56354734727722,0.964533054905707,3.74715866906919,2.10538447600868,1.71896843238639,0.765153328275374,1.10295709559758,0.463735671240843
|short_description=p3@Gria4
|short_description=p3@Gria4
}}
}}

Latest revision as of 18:43, 26 September 2015

Short description:p3@Gria4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gria4_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: -42bp_to_ENSMUST00000171931_5end
EntrezGene:Gria4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gria4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.89
cerebellum, neonate N30.CNhs11135.1395-42I235.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.87
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D517.21
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.62
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.40
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.92
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.94
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.50
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.04
olfactory brain, adult.CNhs10489.18-22I929.88
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.10e-3373
nervous system1.06e-3175
ectoderm-derived structure2.68e-2895
ectoderm2.68e-2895
presumptive ectoderm2.68e-2895
neurectoderm7.01e-2764
neural plate7.01e-2764
presumptive neural plate7.01e-2764
regional part of nervous system3.88e-2354
ecto-epithelium9.19e-2373
neural tube9.52e-2252
neural rod9.52e-2252
future spinal cord9.52e-2252
neural keel9.52e-2252
gray matter7.46e-1934
brain4.81e-1847
future brain4.81e-1847
structure with developmental contribution from neural crest2.19e-1792
pre-chordal neural plate2.29e-1749
regional part of brain3.71e-1746
anterior neural tube2.48e-1540
brain grey matter5.67e-1529
regional part of telencephalon5.67e-1529
telencephalon5.67e-1529
regional part of forebrain1.39e-1439
forebrain1.39e-1439
future forebrain1.39e-1439
occipital lobe5.26e-1010
visual cortex5.26e-1010
neocortex5.26e-1010
cerebral cortex5.94e-1021
cerebral hemisphere5.94e-1021
pallium5.94e-1021
regional part of cerebral cortex8.56e-1017
autonomic nervous system1.33e-099
peripheral nervous system3.13e-0711
posterior neural tube3.44e-0712
chordal neural plate3.44e-0712
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