FFCP PHASE1:Mm9::chr9:50536361..50536371,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=330938|HGNC=|MCL_coexpression_id=30|UniProt=Q80Y83|association_with_transcript=-189bp_to_ENSMUST00000117646_5end|description=CAGE_peak_12_at_Dixdc1_5end|id=chr9:50536361..50536371,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,1.58e-37,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.90e-23,5;UBERON:0002435,6.90e-23,5;UBERON:0000204,6.90e-23,5;UBERON:0010082,6.90e-23,5;UBERON:0002420,1.30e-14,8;UBERON:0007245,1.30e-14,8;UBERON:0010009,1.30e-14,8;UBERON:0010011,1.30e-14,8;UBERON:0000454,1.30e-14,8;UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4;UBERON:0002616,4.79e-10,46;UBERON:0000955,7.77e-10,47;UBERON:0006238,7.77e-10,47;UBERON:0004733,1.61e-09,6;UBERON:0004732,1.61e-09,6;UBERON:0002028,1.61e-09,6;UBERON:0007277,1.61e-09,6;UBERON:0001049,6.63e-09,52;UBERON:0005068,6.63e-09,52;UBERON:0006241,6.63e-09,52;UBERON:0007135,6.63e-09,52;UBERON:0000073,1.40e-08,54;UBERON:0003528,2.51e-07,29;UBERON:0002791,2.51e-07,29;UBERON:0001893,2.51e-07,29;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,1.31886287730194,1.73826522844578,2.08365348222704,0.279182999001381,0,0,0.294628585473668,0.854230084794618,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,6.73395833126558,6.91174132484402,0,0,0,0,0.149790639404823,0.915001205637253,0.628271760564322,0.173824320192276,0,0.41557608911912,0.486723789203273,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0,0,0.204109497453984,0,0,0.517406741478031,1.07783996466421,0.756424320671277,0.527853372491847,0.43839146485515,0.556094498451196,0,0,0.199034266818493,0,0.257347907114715,0,0,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0.517434735131018,0.643011105094777,0,0,0,0.304464949114599,0.938686832254841,0.42366414172764,0,0.65954501176592,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0.56369293868419,0,0.496375471371293,0,0.258319646955462,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,3.0215755895588,0,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.287177344778066,0.476293691283074,0.347652977834566,0,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.859484216193193,0,0.661774257358546,0.231867835620421|short_description=p12@Dixdc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330938 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q80Y83 | |||
|association_with_transcript=-189bp_to_ENSMUST00000117646_5end | |||
|cluster_id=chr9:50536361..50536371,- | |||
|description=CAGE_peak_12_at_Dixdc1_5end | |||
|id=chr9:50536361..50536371,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.58e-37,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.90e-23,5;UBERON:0002435,6.90e-23,5;UBERON:0000204,6.90e-23,5;UBERON:0010082,6.90e-23,5;UBERON:0002420,1.30e-14,8;UBERON:0007245,1.30e-14,8;UBERON:0010009,1.30e-14,8;UBERON:0010011,1.30e-14,8;UBERON:0000454,1.30e-14,8;UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4;UBERON:0002616,4.79e-10,46;UBERON:0000955,7.77e-10,47;UBERON:0006238,7.77e-10,47;UBERON:0004733,1.61e-09,6;UBERON:0004732,1.61e-09,6;UBERON:0002028,1.61e-09,6;UBERON:0007277,1.61e-09,6;UBERON:0001049,6.63e-09,52;UBERON:0005068,6.63e-09,52;UBERON:0006241,6.63e-09,52;UBERON:0007135,6.63e-09,52;UBERON:0000073,1.40e-08,54;UBERON:0003528,2.51e-07,29;UBERON:0002791,2.51e-07,29;UBERON:0001893,2.51e-07,29;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,1.31886287730194,1.73826522844578,2.08365348222704,0.279182999001381,0,0,0.294628585473668,0.854230084794618,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,6.73395833126558,6.91174132484402,0,0,0,0,0.149790639404823,0.915001205637253,0.628271760564322,0.173824320192276,0,0.41557608911912,0.486723789203273,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0,0,0.204109497453984,0,0,0.517406741478031,1.07783996466421,0.756424320671277,0.527853372491847,0.43839146485515,0.556094498451196,0,0,0.199034266818493,0,0.257347907114715,0,0,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0.517434735131018,0.643011105094777,0,0,0,0.304464949114599,0.938686832254841,0.42366414172764,0,0.65954501176592,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0.56369293868419,0,0.496375471371293,0,0.258319646955462,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,3.0215755895588,0,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.287177344778066,0.476293691283074,0.347652977834566,0,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.859484216193193,0,0.661774257358546,0.231867835620421 | |||
|short_description=p12@Dixdc1 | |||
}} |
Latest revision as of 19:32, 26 September 2015
Short description: | p12@Dixdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Dixdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -189bp_to_ENSMUST00000117646_5end |
EntrezGene: | Dixdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.58e-37 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 6.90e-23 | 5 |
striatum | 6.90e-23 | 5 |
ventral part of telencephalon | 6.90e-23 | 5 |
future corpus striatum | 6.90e-23 | 5 |
basal ganglion | 1.30e-14 | 8 |
nuclear complex of neuraxis | 1.30e-14 | 8 |
aggregate regional part of brain | 1.30e-14 | 8 |
collection of basal ganglia | 1.30e-14 | 8 |
cerebral subcortex | 1.30e-14 | 8 |
cerebellum | 8.72e-14 | 4 |
regional part of metencephalon | 8.72e-14 | 4 |
metencephalon | 8.72e-14 | 4 |
future metencephalon | 8.72e-14 | 4 |
rhombic lip | 8.72e-14 | 4 |
regional part of brain | 4.79e-10 | 46 |
brain | 7.77e-10 | 47 |
future brain | 7.77e-10 | 47 |
segmental subdivision of hindbrain | 1.61e-09 | 6 |
segmental subdivision of nervous system | 1.61e-09 | 6 |
hindbrain | 1.61e-09 | 6 |
presumptive hindbrain | 1.61e-09 | 6 |
neural tube | 6.63e-09 | 52 |
neural rod | 6.63e-09 | 52 |
future spinal cord | 6.63e-09 | 52 |
neural keel | 6.63e-09 | 52 |
regional part of nervous system | 1.40e-08 | 54 |
brain grey matter | 2.51e-07 | 29 |
regional part of telencephalon | 2.51e-07 | 29 |
telencephalon | 2.51e-07 | 29 |
neurectoderm | 2.95e-07 | 64 |
neural plate | 2.95e-07 | 64 |
presumptive neural plate | 2.95e-07 | 64 |