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FFCP PHASE1:Mm9::chr6:142456430..142456482,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16832,433229
|EntrezGene=16832,433229
|HGNC=
|HGNC=
|MCL_coexpression_id=79
|TSSclassifier=NA
|UniProt=P16125
|UniProt=P16125
|association_with_transcript=0bp_to_ENSMUST00000032373,ENSMUST00000130817,NM_008492,uc009epj.1_5end
|association_with_transcript=0bp_to_ENSMUST00000032373,ENSMUST00000130817,NM_008492,uc009epj.1_5end
|cluster_id=chr6:142456430..142456482,-
|description=CAGE_peak_1_at_Gm5514_5end,CAGE_peak_1_at_Ldhb_5end
|description=CAGE_peak_1_at_Gm5514_5end,CAGE_peak_1_at_Ldhb_5end
|id=chr6:142456430..142456482,-
|id=chr6:142456430..142456482,-
|ontology_enrichment_celltype=CL:0000117!6.43e-07!23;CL:0000337!6.43e-07!23
|ontology_enrichment_celltype=CL:0000117!6.43e-07!23;CL:0000337!6.43e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.43e-07,23;CL:0000337,6.43e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.22e-16!73;UBERON:0005743!5.22e-16!73;UBERON:0000073!1.77e-15!75;UBERON:0001016!1.77e-15!75;UBERON:0001049!8.85e-15!52;UBERON:0005068!8.85e-15!52;UBERON:0006241!8.85e-15!52;UBERON:0007135!8.85e-15!52;UBERON:0000955!1.20e-14!50;UBERON:0006238!1.20e-14!50;UBERON:0000033!1.41e-14!63;UBERON:0002616!3.97e-14!49;UBERON:0007811!1.03e-12!86;UBERON:0003103!1.54e-12!43;UBERON:0002020!7.40e-12!34;UBERON:0004121!1.34e-11!102;UBERON:0000924!1.34e-11!102;UBERON:0006601!1.34e-11!102;UBERON:0000153!1.93e-11!94;UBERON:0002346!6.81e-11!71;UBERON:0003075!6.81e-11!71;UBERON:0007284!6.81e-11!71;UBERON:0003080!1.36e-10!40;UBERON:0002791!2.98e-10!29;UBERON:0003528!2.98e-10!29;UBERON:0001893!2.98e-10!29;UBERON:0002780!4.67e-10!39;UBERON:0001890!4.67e-10!39;UBERON:0006240!4.67e-10!39;UBERON:0003056!1.51e-09!49;UBERON:0004111!2.04e-09!122;UBERON:0000025!4.36e-09!114;UBERON:0007100!4.44e-08!18;UBERON:0000948!4.44e-08!18;UBERON:0005498!4.44e-08!18;UBERON:0004140!4.44e-08!18;UBERON:0009881!4.44e-08!18;UBERON:0004141!4.44e-08!18;UBERON:0003084!4.44e-08!18;UBERON:0007005!4.44e-08!18;UBERON:0004139!4.44e-08!18;UBERON:0004291!4.44e-08!18;UBERON:0000956!6.22e-08!21;UBERON:0001869!6.22e-08!21;UBERON:0000203!6.22e-08!21;UBERON:0004535!3.19e-07!23;UBERON:0001009!3.19e-07!23;UBERON:0000489!3.53e-07!21;UBERON:0002619!4.68e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.57e-19,92;UBERON:0001017,5.21e-16,73;UBERON:0000073,7.31e-16,54;UBERON:0001016,1.76e-15,75;UBERON:0001049,8.83e-15,52;UBERON:0005068,8.83e-15,52;UBERON:0006241,8.83e-15,52;UBERON:0007135,8.83e-15,52;UBERON:0004121,3.06e-13,95;UBERON:0000924,3.06e-13,95;UBERON:0006601,3.06e-13,95;UBERON:0000955,5.15e-13,47;UBERON:0006238,5.15e-13,47;UBERON:0002346,5.22e-13,64;UBERON:0003075,5.22e-13,64;UBERON:0007284,5.22e-13,64;UBERON:0003103,1.54e-12,43;UBERON:0002616,1.64e-12,46;UBERON:0002020,7.39e-12,34;UBERON:0010371,9.51e-12,73;UBERON:0003080,1.36e-10,40;UBERON:0003528,2.97e-10,29;UBERON:0002791,2.97e-10,29;UBERON:0001893,2.97e-10,29;UBERON:0002780,4.66e-10,39;UBERON:0001890,4.66e-10,39;UBERON:0006240,4.66e-10,39;UBERON:0003056,1.51e-09,49;UBERON:0004111,1.99e-09,122;UBERON:0000025,4.25e-09,114;UBERON:0007100,4.44e-08,18;UBERON:0000948,4.44e-08,18;UBERON:0005498,4.44e-08,18;UBERON:0004140,4.44e-08,18;UBERON:0009881,4.44e-08,18;UBERON:0004141,4.44e-08,18;UBERON:0003084,4.44e-08,18;UBERON:0007005,4.44e-08,18;UBERON:0004139,4.44e-08,18;UBERON:0004291,4.44e-08,18;UBERON:0000956,6.22e-08,21;UBERON:0001869,6.22e-08,21;UBERON:0000203,6.22e-08,21;UBERON:0004535,3.18e-07,23;UBERON:0001009,3.18e-07,23;UBERON:0000489,3.53e-07,21;UBERON:0002619,4.68e-07,17
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252059957,184.32759094973,374.538947840167,389.158369555094,188.228750317038,257.157208544163,265.092160895031,223.448182381516,211.321716601731,408.951443260272,247.38213972583,158.704533448084,308.74286485373,70.7511001362673,93.7751038914873,107.964203894548,105.446723748147,157.951677051106,176.326724445794,194.064038707394,222.025223435977,181.905647485485,233.311792406649,249.297258932287,224.558438388529,284.010872301213,405.167195520383,88.7943813496259,73.2962208499416,106.103077542098,277.80663621829,63.2489942270483,88.462234521089,24.4379952150135,24.5770330977328,381.20749376652,431.324746607225,430.817426106426,402.136446684229,541.900273138578,529.53112207018,506.941897674086,502.108141595006,553.286881369714,536.399682974885,190.242208121796,110.529889932086,118.489122393369,72.4458016863516,94.745149507848,122.807463644609,150.461034721694,118.676192969603,136.390664076521,134.43491665834,144.990159537217,136.376844822133,137.184808443378,125.105147799115,119.121162613942,112.405311142805,102.789397113087,109.186618782457,114.971966324123,123.941490753163,125.833015625447,134.349185262618,129.470851141395,126.74207530339,134.388195233092,133.860309684632,126.220301282213,124.958112932975,138.248587895087,96.516470725131,111.3982820186,115.053235414658,85.9385190656348,107.52616778306,116.901406254572,128.152826482166,110.883582403124,145.897445698795,144.613979044046,168.31125278819,180.161308277067
|phase1_expression=322.860075763265,2.44282785347553,1.81999695755814,0,0,0.33575854382378,1.63528848416868,61.3335786347487,31.1143075955184,34.407485369333,5.99262888789267,6.22222840163624,30.3025291978234,36.7165690159789,0.333109761815663,1.21485160433896,0,2.20823515750766,2.05671650408608,0.42438965179803,362.114329463255,0.297872853602656,0,0.799962113967033,1.14704640533585,0,1.7230479846363,0.646413698057667,0,0.756090389279792,1.33038306393183,0,0,0,2.59966457776147,3.82339684324532,3.67504841272264,17.1597968602132,25.7840663692854,26.6997109426637,22.3527965451785,15.7100461540443,28.1596004758069,72.7683607898837,63.3605820121966,138.027157625585,64.1560902365392,185.32138292338,302.507873625368,271.229709208625,117.168634900428,99.1892694118304,0.167782606057736,29.7398478224651,10.4189077734164,13.6347501099052,33.2378790328958,182.032248573937,127.864003263266,166.103167491418,124.864786490717,89.1161119341817,67.5864045044466,13.9484456178617,11.8663963508037,9.2362414942993,76.3980281821932,146.771392632834,154.912280788866,154.176781574791,165.94639450624,302.218741499224,317.167224806517,193.290481161197,171.659238593661,120.417661045913,524.15159355709,612.643848132731,625.024983819655,125.951404782335,137.414440690819,168.77593206039,714.987660442537,521.118176889336,482.078471735836,263.692583998933,287.021308490992,175.774677413258,37.4844656999261,96.202596015938,60.8715426273523,11.185510400758,0,2.69851595818909,1.94932925234301,1.34408066129201,250.13151225465,40.9032774187339,37.668970667416,34.273938727503,589.852242024738,51.3305909657271,35.6727335589304,14.2213340630666,29.2262905365139,25.0826266820348,28.3093689208279,224.485507527672,8.02707439306232,79.4165443996813,49.9637741086471,32.273340701087,29.5187836487755,32.8575356404717,41.7439910331752,111.466266509422,27.9330313539842,449.125602593246,56.615075324792,64.059672579174,52.3394398751133,52.366527338604,42.8701050801681,413.406485380305,425.805154951754,15.5828803677241,16.534487181817,20.9965955847693,21.601938602421,639.606030258593,542.138214340072,147.141246324164,553.108986851824,470.516441487808,618.169432564691,549.835640536631,129.234152726051,99.2767625468542,176.400485386705,89.6482306076379,135.585501567137,116.100562738904,77.9669022057162,90.5735955192648,78.7182295180863,107.743638759559,83.7693417563976,131.680015706159,165.34065057949,114.220072421363,106.450430119189,88.1166844358851,63.9508673218875,43.5315208152708,39.7159523267331,240.234360049921,43.5372176134206,32.9405321106835,58.8218443748877,230.116733286943,389.782311688582,448.89471922231,387.787876888574,695.168030763578,796.018302498872,915.486140482356,773.163942833703,924.314450178514,693.61976738532,1064.29766962477,1189.68478008543,1709.22405298956,1251.2161070437,1501.36720667228,362.750161273119,94.775148001321,1.65209391491899,8.46241813323342,123.06732055883,81.2828351511535,29.2529137201152,23.1936053316844,21.7930482967973,23.5879776379573,17.0830462156024,18.6109818838132,24.3795152536261,24.8695590051439,18.5215882763164,11.6846523125049,15.9942156907274,19.1175622324193,163.873066423463,179.827158847713,208.509310995199,393.658016724992,409.045795436523,437.086429556465,565.587588039357,1313.58270687048,1291.78553267883,1376.98895220337,5.03969466048153,35.0374722003798,24.7664333842636,14.8408994174003,13.5916281330297,11.0941493486112,14.5136735515409,14.0971107350897,18.159145398804,24.1614043605512,21.5652309791032,22.3284568601102,19.0342980599882,8.08252409430758,27.9859965094183,7.23665282045051,157.77922440228,126.390771650913,67.1415702941147,93.6992873479038,64.3051280310496,63.9873903427736,61.6533029894776,57.3692924701929,67.6254768215559,64.6676893774423,47.5175210599312,114.376593671585,118.979952505602,149.567126573283,6.03165135757089,8.70249094109935,114.581075613435,46.6333101254998,899.725506291586,759.414517430884,109.016738675489,165.620928246069,80.1390877317292,76.5259938821411,94.1400248092331,122.829962147612,135.461593842096,127.950591916552,81.7717617383286,79.2013374939655,79.4528433672512,528.894886830294,153.863052365763,175.394619612246,141.874541596965,160.515929652277,9.2921596837974,49.2844691394612,30.8370028104046,22.255399411196,23.328849537581,17.8312385807478,16.0225541764297,14.5413491791002,28.5197902707777,25.2829406348653,13.7044191147498,8.25084345985495,37.1079170271629,136.126187087671,162.215789463574,129.24523212405,88.6701168211368,96.140792687516,90.9956083929729,85.5546507012024,130.242797975359,272.416043130873,14.9959310677374,54.9071222295129,44.7256461947658,31.0008434130721,48.2264269772671,34.962011645698,22.7355052571284,655.478442607152,4.44264290074417,36.5304756294904,9.07453184111587,4.1441060541032,3.14396723758358,1.83022538565218,94.8479639365713,94.7471332231165,73.6605860377579,234.848972031718,110.875765750188,56.5228118612639,53.5706490476134,68.1627845007168,77.0819850024007,86.7177747254397,86.4555146887014,352.847009794472,14.5168770086808,85.7448252059957,184.32759094973,374.538947840167,389.158369555094,188.228750317038,257.157208544163,265.092160895031,223.448182381516,211.321716601731,408.951443260272,247.38213972583,158.704533448084,308.74286485373,70.7511001362673,93.7751038914873,107.964203894548,105.446723748147,157.951677051106,176.326724445794,194.064038707394,222.025223435977,181.905647485485,233.311792406649,249.297258932287,224.558438388529,284.010872301213,405.167195520383,88.7943813496259,73.2962208499416,106.103077542098,277.80663621829,63.2489942270483,88.462234521089,24.4379952150135,24.5770330977328,381.20749376652,431.324746607225,430.817426106426,402.136446684229,541.900273138578,529.53112207018,506.941897674086,502.108141595006,553.286881369714,536.399682974885,190.242208121796,110.529889932086,118.489122393369,72.4458016863516,94.745149507848,122.807463644609,150.461034721694,118.676192969603,136.390664076521,134.43491665834,144.990159537217,136.376844822133,137.184808443378,125.105147799115,119.121162613942,112.405311142805,102.789397113087,109.186618782457,114.971966324123,123.941490753163,125.833015625447,134.349185262618,129.470851141395,126.74207530339,134.388195233092,133.860309684632,126.220301282213,124.958112932975,138.248587895087,96.516470725131,111.3982820186,115.053235414658,85.9385190656348,107.52616778306,116.901406254572,128.152826482166,110.883582403124,145.897445698795,144.613979044046,168.31125278819,180.161308277067
|short_description=p1@Gm5514,p1@Ldhb
|short_description=p1@Gm5514,p1@Ldhb
}}
}}

Latest revision as of 21:28, 26 September 2015

Short description:p1@Gm5514, p1@Ldhb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm5514_5end, CAGE_peak_1_at_Ldhb_5end
Coexpression cluster:MCL_coexpression_mm9:79
Association with transcript: 0bp_to_ENSMUST00000032373, ENSMUST00000130817, NM_008492, uc009epj.1_5end
EntrezGene:16832,433229
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm5514p1@Ldhb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7322.86
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E961.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E731.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.22
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E430.30
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E836.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3362.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H428.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D872.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D963.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3138.03
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B764.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2185.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8302.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3271.23
Mouse Astrocytes, donor2.CNhs12078.11552-120C4117.17
Mouse Astrocytes, donor3.CNhs12107.11633-122C499.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.24
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5182.03
Mouse Granule cells, donor1.CNhs12131.11713-123C3127.86
Mouse Granule cells, donor2.CNhs12357.11731-123E3166.10
Mouse Granule cells, donor3.CNhs12108.11636-122C7124.86
Mouse Meningeal cells, donor1.CNhs12132.11716-123C689.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D167.59
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C876.40
Mouse Microglia, donor2.CNhs12634.11736-123E8146.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5154.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5154.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9165.95
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1302.22
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5317.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2193.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2171.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6120.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3524.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3612.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7625.02
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4125.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4137.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8168.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4714.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5521.12
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6482.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6263.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6287.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1175.77
Mouse Schwann, donor1.CNhs12507.11728-123D937.48
Mouse Schwann, donor2.CNhs12573.11746-123F996.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G360.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7250.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I740.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E337.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I834.27
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6589.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H151.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.31
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6224.49
accessory axillary lymph node, adult.CNhs10475.1063-29H98.03
adrenal gland, adult.CNhs10508.49-24D779.42
adrenal gland, embryo E14.CNhs11038.406-44C549.96
adrenal gland, embryo E16.CNhs11004.1254-43D632.27
adrenal gland, embryo E17.CNhs11043.1263-45I129.52
adrenal gland, embryo E18.CNhs11026.1262-18F532.86
adrenal gland, neonate N00.CNhs11191.1311-23C141.74
adrenal gland, neonate N25.CNhs11223.1377-27I3111.47
amnion, adult pregnant day17.5.CNhs10488.583-22A827.93
aorta, adult.CNhs10498.46-23H1449.13
bone (os femoris), adult.CNhs10483.56-12G256.62
bone (os femoris), neonate N02.CNhs11227.1985-43F564.06
bone (os femoris), neonate N16.CNhs11225.1525-43A652.34
bone (os femoris), neonate N20.CNhs11195.1350-25C352.37
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B2413.41
cerebellum, neonate N30.CNhs11135.1395-42I2425.81
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.60
corpora quadrigemina, adult.CNhs10501.16-22A4639.61
corpus striatum, adult.CNhs10487.19-21D8542.14
corpus striatum, neonate N00.CNhs11226.630-43F1147.14
cortex, adult.CNhs10473.12-14D5553.11
cortex, neonate N30.CNhs11107.1392-42F2470.52
diencephalon, adult.CNhs10482.20-12F2618.17
diencephalon, neonate N30.CNhs11201.1388-42B2549.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1129.23
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A299.28
epididymis, adult.CNhs10490.58-23B2176.40
eyeball, adult.CNhs10484.31-12G489.65
eyeball, embryo E12.CNhs11016.345-16C6135.59
eyeball, embryo E14.CNhs10521.399-16E2116.10
eyeball, embryo E15.CNhs10593.426-16C977.97
eyeball, embryo E17.CNhs11023.1261-18D490.57
eyeball, neonate N00.CNhs11207.633-15C678.72
eyeball, neonate N01.CNhs11140.1532-43E7107.74
eyeball, neonate N02.CNhs11205.1551-44G883.77
eyeball, neonate N16.CNhs11188.777-19A2131.68
forelimb, embryo E11.CNhs10596.335-25E2165.34
forelimb, embryo E12.CNhs10600.359-14H2114.22
forelimb, embryo E13.CNhs10589.384-1E2106.45
forelimb, embryo E14.CNhs10577.413-26A888.12
forelimb, embryo E15.CNhs11007.437-20E763.95
forelimb, embryo E17.CNhs10598.1517-43C443.53
forelimb, embryo E18.CNhs11008.1520-43B539.72
gonad, embryo E13.CNhs11044.1564-45I6240.23
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C843.54
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D232.94
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D558.82
heart, embryo E11.CNhs10586.331-24E9230.12
heart, embryo E12.CNhs11015.353-12F5389.78
heart, embryo E13.CNhs11013.376-3I9448.89
heart, embryo E14.CNhs10597.403-26D4387.79
heart, embryo E15.CNhs11017.431-16C8695.17
heart, embryo E16.CNhs11021.457-17C6796.02
heart, embryo E17.CNhs11025.479-18E5915.49
heart, embryo E18.CNhs11030.1283-20G3773.16
heart, neonate N00.CNhs11213.639-21E3924.31
heart, neonate N03.CNhs11221.1349-25I2693.62
heart, neonate N10.CNhs11118.749-24G11064.30
heart, neonate N16.CNhs11209.782-15G11189.68
heart, neonate N20.CNhs11127.821-26I61709.22
heart, neonate N25.CNhs11196.1351-25D31251.22
heart, neonate N30.CNhs11202.1390-42D21501.37
hippocampus, adult.CNhs10478.13-16E8362.75
hippocampus, neonate N00.CNhs11228.627-43G194.78
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I5123.07
intestine, embryo E13.CNhs11010.381-16D581.28
intestine, embryo E15.CNhs10602.976-16D829.25
intestine, embryo E16.CNhs10585.463-22H423.19
intestine, embryo E17.CNhs10582.482-18D321.79
intestine, embryo E18.CNhs10526.1289-20F723.59
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E918.61
intestine, neonate N06.CNhs11102.688-20B824.38
intestine, neonate N07.CNhs11095.720-20F224.87
intestine, neonate N10.CNhs11098.755-23A518.52
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E315.99
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I9163.87
kidney, embryo E15.CNhs10997.434-16F8179.83
kidney, embryo E16.CNhs10584.464-22A5208.51
kidney, embryo E17.CNhs11028.483-18I2393.66
kidney, embryo E18.CNhs11001.1288-20C7409.05
kidney, neonate N00.CNhs11214.646-21G7437.09
kidney, neonate N10.CNhs11206.758-6D5565.59
kidney, neonate N20.CNhs11113.832-19I11313.58
kidney, neonate N25.CNhs11122.1353-25F31291.79
kidney, neonate N30.CNhs11203.1385-42H11376.99
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F835.04
liver, embryo E13.CNhs10524.378-3H624.77
liver, embryo E14.CNhs10594.409-16E114.84
liver, embryo E15.CNhs10520.433-16D713.59
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A314.51
liver, embryo E18.CNhs10579.499-43G414.10
liver, neonate N00.CNhs11117.641-24F418.16
liver, neonate N03.CNhs11123.1345-25G224.16
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B919.03
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H127.99
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B1157.78
lung, embryo E12.CNhs10522.354-16G2126.39
lung, embryo E14.CNhs10604.404-26F867.14
lung, embryo E15.CNhs11020.432-17C593.70
lung, embryo E16.CNhs10998.458-17B664.31
lung, embryo E17.CNhs10605.480-44A663.99
lung, embryo E18.CNhs10583.1287-20I661.65
lung, neonate N00.CNhs11224.640-42C657.37
lung, neonate N06.CNhs11212.683-20E567.63
lung, neonate N07.CNhs11111.715-19A364.67
lung, neonate N10.CNhs11219.750-23E647.52
lung, neonate N20.CNhs11109.822-18A4114.38
lung, neonate N25.CNhs11119.1359-25C7118.98
lung, neonate N30.CNhs11133.1394-42H2149.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B6114.58
mammary gland, adult pregnant day19.CNhs10476.588-5H246.63
medulla oblongata, adult.CNhs10477.17-12C2899.73
medulla oblongata, neonate N30.CNhs11200.1396-42A3759.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7109.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2165.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E180.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E276.53
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E394.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7122.83
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8135.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9127.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D481.77
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D579.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D679.45
olfactory brain, adult.CNhs10489.18-22I9528.89
ovary, adult.CNhs10507.91-2I7153.86
ovary, embryo E18.CNhs11040.505-44H7175.39
ovary, neonate N00.CNhs11217.1299-22I4141.87
oviduct, adult pregnant day01.CNhs10500.988-6G6160.52
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F449.28
pancreas, embryo E15.CNhs11042.1556-45F230.84
pancreas, embryo E16.CNhs11003.460-26E522.26
pancreas, embryo E17.CNhs10599.1558-45G323.33
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G916.02
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D828.52
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G837.11
pituitary gland, embryo E12.CNhs11018.346-16E6136.13
pituitary gland, embryo E13.CNhs11009.370-44C7162.22
pituitary gland, embryo E14.CNhs11037.398-44A5129.25
pituitary gland, embryo E15.CNhs10592.427-16B988.67
pituitary gland, embryo E16.CNhs11036.449-43F696.14
pituitary gland, embryo E17.CNhs11039.1265-44F591.00
pituitary gland, neonate N00.CNhs11190.1308-22E985.55
placenta, adult pregnant day10.CNhs10472.539-13I7130.24
placenta, adult pregnant day17.CNhs10464.577-18G3272.42
prostate, adult.CNhs10470.859-1F815.00
skin, adult.CNhs10492.30-1C354.91
skin, neonate N00.CNhs11124.650-25G444.73
skin, neonate N03.CNhs11215.662-22H331.00
skin, neonate N06.CNhs11097.693-20I548.23
skin, neonate N10.CNhs11108.762-6C434.96
small intestine, neonate N16.CNhs11114.790-21I122.74
spinal cord, adult.CNhs10505.24-13C9655.48
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C136.53
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C694.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C994.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D373.66
stomach, adult.CNhs10503.33-1H6234.85
stomach, embryo E12.CNhs10588.356-43E3110.88
stomach, embryo E15.CNhs10603.1252-16G856.52
stomach, embryo E16.CNhs11022.459-17D453.57
stomach, embryo E17.CNhs11006.1035-18D568.16
stomach, embryo E18.CNhs10999.1286-20C677.08
stomach, neonate N03.CNhs11193.1340-24B886.72
stomach, neonate N07.CNhs11210.718-18A986.46
stomach, neonate N25.CNhs11104.1355-25E4352.85
stomach, neonate N30.CNhs11134.1386-42I114.52
submandibular gland, adult.CNhs10469.59-29C185.74
testis, adult.CNhs10504.57-7G5184.33
testis, embryo E13.CNhs11031.389-23F5374.54
testis, embryo E15.CNhs11034.443-27C5389.16
testis, embryo E16.CNhs11033.470-26G5188.23
testis, embryo E17.CNhs11029.486-18I5257.16
testis, embryo E18.CNhs11027.503-18G5265.09
testis, neonate N00.CNhs11189.1300-22B7223.45
testis, neonate N07.CNhs11222.726-26I4211.32
testis, neonate N10.CNhs11204.763-44D9408.95
testis, neonate N20.CNhs11110.839-18H3247.38
testis, neonate N30.CNhs11130.1391-42E2158.70
thymus, adult.CNhs10471.38-12B5308.74
thymus, embryo E14.CNhs11041.402-44I470.75
thymus, embryo E15.CNhs11005.430-45I293.78
thymus, embryo E16.CNhs11002.456-26C5107.96
thymus, embryo E17.CNhs10581.478-18C1105.45
thymus, embryo E18.CNhs10595.1273-19G4157.95
thymus, neonate N02.CNhs11181.1541-43F8176.33
thymus, neonate N03.CNhs11137.2104-43C7194.06
thymus, neonate N06.CNhs11197.681-26C4222.03
thymus, neonate N07.CNhs11211.713-19D3181.91
thymus, neonate N10.CNhs11194.748-24E4233.31
thymus, neonate N20.CNhs11186.820-7A2249.30
thymus, neonate N25.CNhs11125.1362-25G7224.56
thymus, neonate N30.CNhs11132.1393-42G2284.01
tongue, adult.CNhs10499.32-1B4405.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H388.79
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F773.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5106.10
urinary bladder, adult.CNhs10481.879-12E4277.81
uterus, adult pregnant day19.CNhs10497.590-15F563.25
uterus, adult.CNhs10509.92-27E588.46
vagina, adult.CNhs10502.89-27D524.44
vesicular gland, adult.CNhs10491.51-27F824.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1381.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2431.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3430.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7402.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4541.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5529.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6506.94
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7502.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8553.29
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9536.40
whole body, embryo E11.CNhs11014.324-5I8190.24
whole body, embryo E12.CNhs10587.857-27C9110.53
whole body, embryo E13.CNhs10512.372-23H2118.49
whole body, embryo E14.5.CNhs10578.420-27D272.45
whole body, embryo E14.CNhs10519.395-14B194.75
whole body, embryo E16.CNhs10514.453-14F2122.81
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5150.46
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5118.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5136.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5134.43
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5144.99
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5136.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5137.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5125.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5119.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5112.41
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5102.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5109.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5114.97
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5123.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5125.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5134.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5129.47
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5126.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5134.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5133.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5126.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5124.96
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5138.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G596.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5111.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5115.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G585.94
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5107.53
whole body, embryo E17.5.CNhs10513.490-9F9116.90
whole body, embryo E17.CNhs10517.475-3I5128.15
whole body, embryo E18.CNhs10516.493-3B3110.88
whole body, neonate N00.CNhs10525.657-19C2145.90
whole body, neonate N01.CNhs10576.659-23C6144.61
whole body, neonate N06.CNhs10515.692-21D1168.31
whole body, neonate N10.CNhs10518.761-6B4180.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.43e-0723
neuroblast (sensu Vertebrata)6.43e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.57e-1992
central nervous system5.21e-1673
regional part of nervous system7.31e-1654
nervous system1.76e-1575
neural tube8.83e-1552
neural rod8.83e-1552
future spinal cord8.83e-1552
neural keel8.83e-1552
ectoderm-derived structure3.06e-1395
ectoderm3.06e-1395
presumptive ectoderm3.06e-1395
brain5.15e-1347
future brain5.15e-1347
neurectoderm5.22e-1364
neural plate5.22e-1364
presumptive neural plate5.22e-1364
compound organ1.54e-1243
regional part of brain1.64e-1246
gray matter7.39e-1234
ecto-epithelium9.51e-1273
anterior neural tube1.36e-1040
brain grey matter2.97e-1029
regional part of telencephalon2.97e-1029
telencephalon2.97e-1029
regional part of forebrain4.66e-1039
forebrain4.66e-1039
future forebrain4.66e-1039
pre-chordal neural plate1.51e-0949
anatomical conduit1.99e-09122
tube4.25e-09114
primary circulatory organ4.44e-0818
heart4.44e-0818
primitive heart tube4.44e-0818
primary heart field4.44e-0818
anterior lateral plate mesoderm4.44e-0818
heart tube4.44e-0818
heart primordium4.44e-0818
cardiac mesoderm4.44e-0818
cardiogenic plate4.44e-0818
heart rudiment4.44e-0818
cerebral cortex6.22e-0821
cerebral hemisphere6.22e-0821
pallium6.22e-0821
cardiovascular system3.18e-0723
circulatory system3.18e-0723
cavitated compound organ3.53e-0721
regional part of cerebral cortex4.68e-0717
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