FFCP PHASE1:Mm9::chr6:142912655..142912712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20449 | |EntrezGene=20449 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=822 | |||
|TSSclassifier=NA | |||
|UniProt=Q64687 | |UniProt=Q64687 | ||
|association_with_transcript=259bp_to_ENSMUST00000032421,NM_011374,uc009epv.1_5end | |association_with_transcript=259bp_to_ENSMUST00000032421,NM_011374,uc009epv.1_5end | ||
|cluster_id=chr6:142912655..142912712,- | |||
|description=CAGE_peak_1_at_St8sia1_5end | |description=CAGE_peak_1_at_St8sia1_5end | ||
|id=chr6:142912655..142912712,- | |id=chr6:142912655..142912712,- | ||
|ontology_enrichment_celltype=CL:0000117!5.28e-10!23;CL:0000337!5.28e-10!23;CL:0000540!1.01e-09!33;CL:0000047!1.01e-09!33;CL:0000031!1.01e-09!33;CL:0000404!1.01e-09!33;CL:0002319!7.98e-08!43;CL:0000221!2.03e-07!44;CL:0000133!2.03e-07!44;CL:0000791!4.64e-07!9;CL:0000789!4.64e-07!9;CL:0002420!4.64e-07!9;CL:0002419!4.64e-07!9;CL:0000790!4.64e-07!9 | |ontology_enrichment_celltype=CL:0000117!5.28e-10!23;CL:0000337!5.28e-10!23;CL:0000540!1.01e-09!33;CL:0000047!1.01e-09!33;CL:0000031!1.01e-09!33;CL:0000404!1.01e-09!33;CL:0002319!7.98e-08!43;CL:0000221!2.03e-07!44;CL:0000133!2.03e-07!44;CL:0000791!4.64e-07!9;CL:0000789!4.64e-07!9;CL:0002420!4.64e-07!9;CL:0002419!4.64e-07!9;CL:0000790!4.64e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.06e-11,23;CL:0000337,8.06e-11,23;CL:0000540,1.32e-09,33;CL:0000047,1.32e-09,33;CL:0000031,1.32e-09,33;CL:0000404,1.32e-09,33;CL:0000791,5.60e-08,9;CL:0000789,5.60e-08,9;CL:0002420,5.60e-08,9;CL:0002419,5.60e-08,9;CL:0000790,5.60e-08,9;CL:0002319,2.07e-07,43;CL:0000624,3.57e-07,8;CL:0000221,5.47e-07,44;CL:0000133,5.47e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!3.01e-21!86;UBERON:0000153!3.48e-19!94;UBERON:0001017!9.34e-18!73;UBERON:0005743!9.34e-18!73;UBERON:0000073!8.54e-17!75;UBERON:0001016!8.54e-17!75;UBERON:0002346!2.11e-15!71;UBERON:0003075!2.11e-15!71;UBERON:0007284!2.11e-15!71;UBERON:0004121!8.80e-15!102;UBERON:0000924!8.80e-15!102;UBERON:0006601!8.80e-15!102;UBERON:0001049!2.00e-13!52;UBERON:0005068!2.00e-13!52;UBERON:0006241!2.00e-13!52;UBERON:0007135!2.00e-13!52;UBERON:0000955!4.88e-13!50;UBERON:0006238!4.88e-13!50;UBERON:0000033!9.22e-13!63;UBERON:0002616!1.40e-12!49;UBERON:0002020!1.51e-10!34;UBERON:0003056!2.91e-10!49;UBERON:0003080!4.93e-09!40;UBERON:0002791!1.34e-08!29;UBERON:0003528!1.34e-08!29;UBERON:0001893!1.34e-08!29;UBERON:0002780!1.49e-08!39;UBERON:0001890!1.49e-08!39;UBERON:0006240!1.49e-08!39;UBERON:0002370!1.76e-08!23;UBERON:0000974!1.76e-08!23;UBERON:0004807!1.76e-08!23;UBERON:0005058!1.76e-08!23;UBERON:0003351!1.76e-08!23;UBERON:0009113!1.76e-08!23;UBERON:0003295!1.76e-08!23;UBERON:0009722!1.76e-08!23;UBERON:0005562!1.76e-08!23;UBERON:0007690!1.76e-08!23;UBERON:0004177!7.92e-08!29;UBERON:0006562!1.40e-07!24;UBERON:0003408!1.40e-07!24;UBERON:0001557!1.40e-07!24;UBERON:0001042!1.40e-07!24;UBERON:0008814!1.40e-07!24;UBERON:0009145!1.40e-07!24 | |ontology_enrichment_uberon=UBERON:0007811!3.01e-21!86;UBERON:0000153!3.48e-19!94;UBERON:0001017!9.34e-18!73;UBERON:0005743!9.34e-18!73;UBERON:0000073!8.54e-17!75;UBERON:0001016!8.54e-17!75;UBERON:0002346!2.11e-15!71;UBERON:0003075!2.11e-15!71;UBERON:0007284!2.11e-15!71;UBERON:0004121!8.80e-15!102;UBERON:0000924!8.80e-15!102;UBERON:0006601!8.80e-15!102;UBERON:0001049!2.00e-13!52;UBERON:0005068!2.00e-13!52;UBERON:0006241!2.00e-13!52;UBERON:0007135!2.00e-13!52;UBERON:0000955!4.88e-13!50;UBERON:0006238!4.88e-13!50;UBERON:0000033!9.22e-13!63;UBERON:0002616!1.40e-12!49;UBERON:0002020!1.51e-10!34;UBERON:0003056!2.91e-10!49;UBERON:0003080!4.93e-09!40;UBERON:0002791!1.34e-08!29;UBERON:0003528!1.34e-08!29;UBERON:0001893!1.34e-08!29;UBERON:0002780!1.49e-08!39;UBERON:0001890!1.49e-08!39;UBERON:0006240!1.49e-08!39;UBERON:0002370!1.76e-08!23;UBERON:0000974!1.76e-08!23;UBERON:0004807!1.76e-08!23;UBERON:0005058!1.76e-08!23;UBERON:0003351!1.76e-08!23;UBERON:0009113!1.76e-08!23;UBERON:0003295!1.76e-08!23;UBERON:0009722!1.76e-08!23;UBERON:0005562!1.76e-08!23;UBERON:0007690!1.76e-08!23;UBERON:0004177!7.92e-08!29;UBERON:0006562!1.40e-07!24;UBERON:0003408!1.40e-07!24;UBERON:0001557!1.40e-07!24;UBERON:0001042!1.40e-07!24;UBERON:0008814!1.40e-07!24;UBERON:0009145!1.40e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.44e-19,73;UBERON:0001016,5.43e-18,75;UBERON:0000073,4.72e-17,54;UBERON:0002346,9.40e-17,64;UBERON:0003075,9.40e-17,64;UBERON:0007284,9.40e-17,64;UBERON:0001049,1.25e-15,52;UBERON:0005068,1.25e-15,52;UBERON:0006241,1.25e-15,52;UBERON:0007135,1.25e-15,52;UBERON:0004121,1.31e-14,95;UBERON:0000924,1.31e-14,95;UBERON:0006601,1.31e-14,95;UBERON:0010371,1.52e-13,73;UBERON:0000955,3.79e-13,47;UBERON:0006238,3.79e-13,47;UBERON:0002616,1.25e-12,46;UBERON:0010314,4.73e-12,92;UBERON:0002020,1.90e-11,34;UBERON:0003056,2.82e-11,49;UBERON:0002370,1.50e-10,23;UBERON:0000974,1.50e-10,23;UBERON:0004807,1.50e-10,23;UBERON:0005058,1.50e-10,23;UBERON:0003351,1.50e-10,23;UBERON:0009113,1.50e-10,23;UBERON:0003295,1.50e-10,23;UBERON:0009722,1.50e-10,23;UBERON:0005562,1.50e-10,23;UBERON:0007690,1.50e-10,23;UBERON:0003080,3.04e-10,40;UBERON:0006562,1.03e-09,24;UBERON:0003408,1.03e-09,24;UBERON:0001557,1.03e-09,24;UBERON:0001042,1.03e-09,24;UBERON:0008814,1.03e-09,24;UBERON:0009145,1.03e-09,24;UBERON:0002780,1.10e-09,39;UBERON:0001890,1.10e-09,39;UBERON:0006240,1.10e-09,39;UBERON:0007811,1.58e-09,36;UBERON:0003528,3.31e-09,29;UBERON:0002791,3.31e-09,29;UBERON:0001893,3.31e-09,29;UBERON:0004177,7.27e-09,29;UBERON:0005057,7.27e-09,29;UBERON:0000072,1.24e-07,27 | |||
|phase1_expression=4.80446541314382,0,0,0,0,0,0,18.2063886052623,19.5696323790817,22.4701945269114,7.36237263369671,5.98291192465023,44.8545912419759,44.4969848312697,0.999329285446988,1.01237633694913,0,2.5236973228659,2.60517423850904,2.97072756258621,6.4632900514813,0.893618560807968,1.30599894569468,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.28495594245697,0.659058548203415,0,1.81982348112971,1.43752564364972,0.671130424230945,54.4021606508508,31.2567233202492,0,0,0,5.86717736492834,5.81890077199236,6.33831403506179,0.677689064138264,0,0,0,0,0.898800331555214,2.68952813725088,3.94020526772215,4.99521971827255,3.99617426567626,4.57041575046086,2.87129103237098,2.57230678351403,4.50473713785711,0.919218786610021,24.2254938198655,14.1732945274558,17.9719643909805,2.76961204233407,3.93396867490361,5.73004707612436,15.9134309430787,11.2552522006336,11.9182633265912,7.36571463684169,8.54230084794618,7.08317894136142,0.075726193333184,0.302286240427142,0,0,0,0,0,0,4.0728881838208,0,0,0,0.14084341977668,0,0,0,0,0,0,4.22480354960522,13.2058320660058,0.29688427812965,2.08182392119363,2.13125834818499,2.7673859670727,2.71300752994721,1.64624189989987,0.376999773989026,0.494389935468748,0,0,0.323533699894818,0,0.484875253135222,0,17.5668478206928,13.6140359428746,0.255457055208591,1.07833612055328,0,0.127070227073065,11.833460512981,8.23501085073528,1.50785222535437,6.25767552692195,4.34716277461562,9.76603809429932,8.27430441645564,0.712875546952214,0.373220911830279,0,2.10441855886474,6.8963834770233,4.36813998423599,1.98068342785884,1.50704817835715,0.884474488967262,1.15302348256365,1.40552586839593,3.62184719034622,0.431135985865684,0.945530400839096,0.351902248327898,0.219195732427575,0.834141747676794,0,0.205782136407943,4.57778813682534,0,0,0,2.07125772535502,2.11073453982987,2.70093092191522,2.3674473558521,1.18058539048442,1.07986979021165,1.16266972375204,0.536546802799238,0.817357396570186,0.493679549740441,0.492502392237286,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,8.20130799400096,2.16099685996497,0.330418782983798,0,5.75878276445132,3.71578674976702,2.31961430379768,1.21010114774006,1.33426826306922,0.380451252225118,0.474529061544512,0.988193728344065,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,2.27601481143698,3.54170389090159,3.38123207019241,4.07302655690629,3.49114476901726,2.31448205638051,2.97211724484009,8.26616828685772,8.63493003127561,7.77402132707343,0,0.500535317148282,0.393117990226406,0.674586337154561,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0.369506380333209,1.89491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.655453258862952,1.03610989119537,0.289298117163023,0,0,0,0.275936746304732,16.3761601787548,14.417037450841,0,0,0.94652465824877,2.34263246577983,4.09304455692318,0.238968797952552,1.33679204449436,0.849229592366497,1.21443210502468,1.46127928955656,1.97643888973262,7.39039027770156,0.709700426041343,2.67098405500883,2.11753047159649,0.329940245945071,0,1.21390318077491,0.604647113929502,1.50884063804718,0.295301892880773,1.22974059177571,0.516856586336442,0.727067458955011,0,0.632073515871632,0,0,0,2.88097750450096,1.29358683782755,2.14337035031592,2.30542303734956,1.24858172321449,1.31639216481697,0,0.469343416127421,0,0,1.81374878235628,0,0.422190474497091,0.477489376012546,0.984845398470368,1.1659233465194,15.9465759729038,1.70870880797853,1.03193433981611,0.555583582109135,1.13021074202815,1.6403307326523,0.915112692826091,0.849892149969277,0.839708713941948,0.552799895217695,0,1.42351197111511,1.42323626988794,0.972048067396211,1.04544148007234,0,0,0.0826534557253359,0,0.259229946583586,0,0,4.63501292736334,3.47462829959905,2.33341426012857,2.32487682259916,2.19642963138012,1.76035857968631,2.3436789271911,1.99232754408851,2.17425708743405,0.288030006257865,17.0646005139216,1.41907650703115,2.46506297195585,5.97635785697857,10.025494957379,13.1129694155635,15.0244311899961,11.0767145380933,15.5488332920147,11.73584822487,19.1569751759997,22.6102283316226,22.3211472605564,19.0509350555957,0,0,0,0,0,0,0,0,0,4.51801474093653,3.22227665555024,2.86447756719698,3.60891682921744,4.7955776383945,3.0215755895588,6.07520250208625,9.45674526770863,11.3285602246051,2.5888015587591,0.726511433089237,4.38927360741134,1.36586884603307,1.70174701947806,0.419226325255965,0.183843508450014,1.55572709461131,1.03017528619447,1.60459604795908,1.26348605881899,1.2673964994512,0.754505365544305,1.03005658216871,1.21647789569252,0.746661096422973,0.952587382566147,0.579421629724277,1.15745532278223,1.23625770240992,0.883193520806384,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,0.752875043322645,0.676916863133412,0.73171189149109,1.05227884575137,0.679020569229309,1.12228454331548,0.949080144993393,1.47756723563345,0,1.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|phase1_expression=4.80446541314382,0,0,0,0,0,0,18.2063886052623,19.5696323790817,22.4701945269114,7.36237263369671,5.98291192465023,44.8545912419759,44.4969848312697,0.999329285446988,1.01237633694913,0,2.5236973228659,2.60517423850904,2.97072756258621,6.4632900514813,0.893618560807968,1.30599894569468,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.28495594245697,0.659058548203415,0,1.81982348112971,1.43752564364972,0.671130424230945,54.4021606508508,31.2567233202492,0,0,0,5.86717736492834,5.81890077199236,6.33831403506179,0.677689064138264,0,0,0,0,0.898800331555214,2.68952813725088,3.94020526772215,4.99521971827255,3.99617426567626,4.57041575046086,2.87129103237098,2.57230678351403,4.50473713785711,0.919218786610021,24.2254938198655,14.1732945274558,17.9719643909805,2.76961204233407,3.93396867490361,5.73004707612436,15.9134309430787,11.2552522006336,11.9182633265912,7.36571463684169,8.54230084794618,7.08317894136142,0.075726193333184,0.302286240427142,0,0,0,0,0,0,4.0728881838208,0,0,0,0.14084341977668,0,0,0,0,0,0,4.22480354960522,13.2058320660058,0.29688427812965,2.08182392119363,2.13125834818499,2.7673859670727,2.71300752994721,1.64624189989987,0.376999773989026,0.494389935468748,0,0,0.323533699894818,0,0.484875253135222,0,17.5668478206928,13.6140359428746,0.255457055208591,1.07833612055328,0,0.127070227073065,11.833460512981,8.23501085073528,1.50785222535437,6.25767552692195,4.34716277461562,9.76603809429932,8.27430441645564,0.712875546952214,0.373220911830279,0,2.10441855886474,6.8963834770233,4.36813998423599,1.98068342785884,1.50704817835715,0.884474488967262,1.15302348256365,1.40552586839593,3.62184719034622,0.431135985865684,0.945530400839096,0.351902248327898,0.219195732427575,0.834141747676794,0,0.205782136407943,4.57778813682534,0,0,0,2.07125772535502,2.11073453982987,2.70093092191522,2.3674473558521,1.18058539048442,1.07986979021165,1.16266972375204,0.536546802799238,0.817357396570186,0.493679549740441,0.492502392237286,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,8.20130799400096,2.16099685996497,0.330418782983798,0,5.75878276445132,3.71578674976702,2.31961430379768,1.21010114774006,1.33426826306922,0.380451252225118,0.474529061544512,0.988193728344065,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,2.27601481143698,3.54170389090159,3.38123207019241,4.07302655690629,3.49114476901726,2.31448205638051,2.97211724484009,8.26616828685772,8.63493003127561,7.77402132707343,0,0.500535317148282,0.393117990226406,0.674586337154561,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0.369506380333209,1.89491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.655453258862952,1.03610989119537,0.289298117163023,0,0,0,0.275936746304732,16.3761601787548,14.417037450841,0,0,0.94652465824877,2.34263246577983,4.09304455692318,0.238968797952552,1.33679204449436,0.849229592366497,1.21443210502468,1.46127928955656,1.97643888973262,7.39039027770156,0.709700426041343,2.67098405500883,2.11753047159649,0.329940245945071,0,1.21390318077491,0.604647113929502,1.50884063804718,0.295301892880773,1.22974059177571,0.516856586336442,0.727067458955011,0,0.632073515871632,0,0,0,2.88097750450096,1.29358683782755,2.14337035031592,2.30542303734956,1.24858172321449,1.31639216481697,0,0.469343416127421,0,0,1.81374878235628,0,0.422190474497091,0.477489376012546,0.984845398470368,1.1659233465194,15.9465759729038,1.70870880797853,1.03193433981611,0.555583582109135,1.13021074202815,1.6403307326523,0.915112692826091,0.849892149969277,0.839708713941948,0.552799895217695,0,1.42351197111511,1.42323626988794,0.972048067396211,1.04544148007234,0,0,0.0826534557253359,0,0.259229946583586,0,0,4.63501292736334,3.47462829959905,2.33341426012857,2.32487682259916,2.19642963138012,1.76035857968631,2.3436789271911,1.99232754408851,2.17425708743405,0.288030006257865,17.0646005139216,1.41907650703115,2.46506297195585,5.97635785697857,10.025494957379,13.1129694155635,15.0244311899961,11.0767145380933,15.5488332920147,11.73584822487,19.1569751759997,22.6102283316226,22.3211472605564,19.0509350555957,0,0,0,0,0,0,0,0,0,4.51801474093653,3.22227665555024,2.86447756719698,3.60891682921744,4.7955776383945,3.0215755895588,6.07520250208625,9.45674526770863,11.3285602246051,2.5888015587591,0.726511433089237,4.38927360741134,1.36586884603307,1.70174701947806,0.419226325255965,0.183843508450014,1.55572709461131,1.03017528619447,1.60459604795908,1.26348605881899,1.2673964994512,0.754505365544305,1.03005658216871,1.21647789569252,0.746661096422973,0.952587382566147,0.579421629724277,1.15745532278223,1.23625770240992,0.883193520806384,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,0.752875043322645,0.676916863133412,0.73171189149109,1.05227884575137,0.679020569229309,1.12228454331548,0.949080144993393,1.47756723563345,0,1.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| ||
|short_description=p1@St8sia1 | |short_description=p1@St8sia1 | ||
}} | }} |
Latest revision as of 21:34, 26 September 2015
Short description: | p1@St8sia1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St8sia1_5end |
Coexpression cluster: | MCL_coexpression_mm9:822 |
Association with transcript: | 259bp_to_ENSMUST00000032421, NM_011374, uc009epv.1_5end |
EntrezGene: | St8sia1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.06e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.06e-11 | 23 |
neuron | 1.32e-09 | 33 |
neuronal stem cell | 1.32e-09 | 33 |
neuroblast | 1.32e-09 | 33 |
electrically signaling cell | 1.32e-09 | 33 |
mature alpha-beta T cell | 5.60e-08 | 9 |
alpha-beta T cell | 5.60e-08 | 9 |
immature T cell | 5.60e-08 | 9 |
mature T cell | 5.60e-08 | 9 |
immature alpha-beta T cell | 5.60e-08 | 9 |
neural cell | 2.07e-07 | 43 |
CD4-positive, alpha-beta T cell | 3.57e-07 | 8 |
ectodermal cell | 5.47e-07 | 44 |
neurectodermal cell | 5.47e-07 | 44 |