FFCP PHASE1:Mm9::chr1:182413541..182413616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381310 | |EntrezGene=381310 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=235 | |MCL_coexpression_id=235 | ||
|TSSclassifier=NA | |||
|UniProt=Q0VBF8 | |UniProt=Q0VBF8 | ||
|association_with_transcript=0bp_to_ENSMUST00000136521_5end | |association_with_transcript=0bp_to_ENSMUST00000136521_5end | ||
|cluster_id=chr1:182413541..182413616,- | |||
|description=CAGE_peak_1_at_6330403A02Rik_5end | |description=CAGE_peak_1_at_6330403A02Rik_5end | ||
|id=chr1:182413541..182413616,- | |id=chr1:182413541..182413616,- | ||
|ontology_enrichment_celltype=CL:0000117!2.41e-10!23;CL:0000337!2.41e-10!23 | |ontology_enrichment_celltype=CL:0000117!2.41e-10!23;CL:0000337!2.41e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-11,23;CL:0000337,1.24e-11,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-14!52;UBERON:0005068!1.08e-14!52;UBERON:0006241!1.08e-14!52;UBERON:0007135!1.08e-14!52;UBERON:0002020!1.10e-14!34;UBERON:0001017!1.43e-14!73;UBERON:0005743!1.43e-14!73;UBERON:0000955!1.73e-13!50;UBERON:0006238!1.73e-13!50;UBERON:0000073!2.24e-13!75;UBERON:0001016!2.24e-13!75;UBERON:0002616!5.94e-13!49;UBERON:0000033!5.01e-12!63;UBERON:0002791!1.47e-11!29;UBERON:0003528!1.47e-11!29;UBERON:0001893!1.47e-11!29;UBERON:0002346!6.03e-11!71;UBERON:0003075!6.03e-11!71;UBERON:0007284!6.03e-11!71;UBERON:0003080!2.29e-10!40;UBERON:0004121!4.77e-10!102;UBERON:0000924!4.77e-10!102;UBERON:0006601!4.77e-10!102;UBERON:0003056!5.99e-10!49;UBERON:0002780!6.94e-10!39;UBERON:0001890!6.94e-10!39;UBERON:0006240!6.94e-10!39;UBERON:0000956!4.72e-08!21;UBERON:0001869!4.72e-08!21;UBERON:0000203!4.72e-08!21;UBERON:0002619!1.05e-07!17;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10 | |ontology_enrichment_uberon=UBERON:0001049!1.08e-14!52;UBERON:0005068!1.08e-14!52;UBERON:0006241!1.08e-14!52;UBERON:0007135!1.08e-14!52;UBERON:0002020!1.10e-14!34;UBERON:0001017!1.43e-14!73;UBERON:0005743!1.43e-14!73;UBERON:0000955!1.73e-13!50;UBERON:0006238!1.73e-13!50;UBERON:0000073!2.24e-13!75;UBERON:0001016!2.24e-13!75;UBERON:0002616!5.94e-13!49;UBERON:0000033!5.01e-12!63;UBERON:0002791!1.47e-11!29;UBERON:0003528!1.47e-11!29;UBERON:0001893!1.47e-11!29;UBERON:0002346!6.03e-11!71;UBERON:0003075!6.03e-11!71;UBERON:0007284!6.03e-11!71;UBERON:0003080!2.29e-10!40;UBERON:0004121!4.77e-10!102;UBERON:0000924!4.77e-10!102;UBERON:0006601!4.77e-10!102;UBERON:0003056!5.99e-10!49;UBERON:0002780!6.94e-10!39;UBERON:0001890!6.94e-10!39;UBERON:0006240!6.94e-10!39;UBERON:0000956!4.72e-08!21;UBERON:0001869!4.72e-08!21;UBERON:0000203!4.72e-08!21;UBERON:0002619!1.05e-07!17;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.61e-17,34;UBERON:0000073,1.67e-16,54;UBERON:0001049,4.28e-15,52;UBERON:0005068,4.28e-15,52;UBERON:0006241,4.28e-15,52;UBERON:0007135,4.28e-15,52;UBERON:0001017,8.07e-14,73;UBERON:0003528,3.79e-13,29;UBERON:0002791,3.79e-13,29;UBERON:0001893,3.79e-13,29;UBERON:0001016,7.64e-13,75;UBERON:0002346,1.81e-12,64;UBERON:0003075,1.81e-12,64;UBERON:0007284,1.81e-12,64;UBERON:0000955,6.55e-12,47;UBERON:0006238,6.55e-12,47;UBERON:0002616,2.42e-11,46;UBERON:0004121,4.51e-11,95;UBERON:0000924,4.51e-11,95;UBERON:0006601,4.51e-11,95;UBERON:0010371,4.91e-11,73;UBERON:0003080,5.00e-11,40;UBERON:0002780,1.74e-10,39;UBERON:0001890,1.74e-10,39;UBERON:0006240,1.74e-10,39;UBERON:0003056,4.17e-10,49;UBERON:0000956,4.01e-09,21;UBERON:0001869,4.01e-09,21;UBERON:0000203,4.01e-09,21;UBERON:0002619,9.87e-09,17;UBERON:0002021,1.85e-08,10;UBERON:0000411,1.85e-08,10;UBERON:0001950,1.85e-08,10 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0.159544317990673,0,0,0,0,0,0.473193248037357,0.548457734422955,0.42438965179803,13.8620562946244,1.68794617041505,2.87319768052829,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0.515672092277442,6.47412674750713,11.1088105647127,10.1413024560989,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,1.15265491596466,1.24427534770173,2.70011876663381,1.47227472945967,67.1279813348938,67.1440364492905,5.75706756310284,5.65488279007595,9.19218786610021,31.9336054898227,77.3785268796237,49.3076971752542,8.17694983927202,7.95942499340964,4.16730696445408,8.09630697104005,28.138130501584,43.5475006163909,87.2100613002056,67.9112917411721,44.1766686605962,0.075726193333184,0,3.76823835312181,0.860423876981386,0,0,0,0,4.21333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,2.2836775943812,0.517875767294343,0.29688427812965,0,0.608930956624282,0.230615497256059,0.60289056221049,0.587943535678524,0.251333182659351,0.494389935468748,16.4843266888699,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,14.9113408974498,6.14839673724249,3.14170060220183,4.85368404896324,0.11981512450592,0,0,17.6752954497691,74.1150976566175,14.1989417887537,118.722010691325,113.537663054667,82.0762776010262,88.0970058457924,2.54598409625791,1.8661045591514,0.758168275301024,0.631325567659422,4.16385417480652,1.37941262660084,0.540186389416048,1.05493372485001,1.36072998302656,1.2811372028485,1.96773621575431,3.3631438196072,0.862271971731369,0.756424320671277,0.351902248327898,0.43839146485515,3.33656699070717,2.089512999133,2.05782136407943,6.36909653819178,0,0,0,0.414251545071004,0,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0.930135779001631,0.804820204198858,0.700592054203017,0.822799249567402,1.64167464079095,0.891756905004413,1.02339991197733,2.63460138349261,1.74468344388483,224.799955015052,31.0771929385439,0.991256348951394,4.23120906661671,0.426576501070468,1.16118335930219,2.31961430379768,3.83198696784351,4.22518283305254,6.65789691393957,5.21981967698963,8.39964669092456,10.5560787696113,16.9113001234978,15.9870551437679,8.08937467788799,9.51007419448655,10.1562049359727,1.13800740571849,1.02823661348756,3.38123207019241,2.03651327845314,1.55161989734101,0.561086559122548,0.569128834118316,0.885660887877613,0.941992367048249,0.616985819609003,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0.624075346229121,1.01031551178845,0.538192240565737,0.482443521363367,3.14080423283228,0.37898282354097,0,0.509235257325564,0.234690248288502,0.335012514883631,0.714130922658041,0.390267295715598,0.315270288212382,0.44292937929755,1.2756381492599,1.3109065177259,1.03610989119537,1.01254341007058,0,0,0,0,12.5229460190478,14.417037450841,0,1.00988370881749,0.631016438832513,0.780877488593277,0.646270193198397,0,0.222798674082394,0,0.809621403349789,1.75353514746787,1.97643888973262,34.3813808571334,3.12268187458191,8.54714897602825,3.90928702448583,3.13443233647817,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,1.47650946440386,1.84461088766356,4.9101375701962,3.63533729477506,1.42598951353889,6.0046984007805,0,0,0.340439605753788,1.26042765821917,0.258717367565509,0.214337035031592,0.177340233642274,0.891844088010353,1.31639216481697,1.522324745573,1.17335854031855,0.21183207086382,5.07215315526412,1.81374878235628,1.61464426695906,2.0506394475573,2.14870219205646,1.96969079694074,11.9507143018239,15.0194494628513,1.87957968877638,1.44470807574256,0.555583582109135,0.753473828018764,0.956859594047176,1.14389086603261,0.169978429993855,0.139951452323658,0.967399816630967,8.59203556213602,0.632671987162271,1.82987520414164,3.02414954301044,4.80903080833278,6.98760203987768,16.1837215661785,31.8215804542543,18.061159996898,16.7203315546413,0,0,0.598066184175915,0.496375471371293,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,1.17183946359555,1.04859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.304827226619999,0,0.0974578807397524,0,0,1.58711268530648,0,0,0,66.4572203470735,3.75364950902364,0.915758121336325,1.71494703263253,3.00943262421218,67.770221114048,57.0803293268899,64.7371930186518,48.4625974209199,68.5082519770642,73.2732080468009,66.8272275229488,73.8526773287722,58.9085131679466,54.3648327339411,0.518936737920883,1.59609949360412,1.87806966329548,1.94485373654635,3.14419743941973,4.96377472815038,3.33370091702423,3.29656091582231,6.4183841918363,3.79045817645696,3.8021894983536,4.33840585187975,4.86935838843389,4.9939618875798,4.7671439233159,2.85776214769844,5.09891034157364,5.01563973205633,2.06042950401653,5.2991611248383,5.82877729055206,4.79184676630211,4.29185141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| ||
|short_description=p1@6330403A02Rik | |short_description=p1@6330403A02Rik | ||
}} | }} |
Latest revision as of 22:14, 26 September 2015
Short description: | p1@6330403A02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_6330403A02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:235 |
Association with transcript: | 0bp_to_ENSMUST00000136521_5end |
EntrezGene: | 6330403A02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 9.61e-17 | 34 |
regional part of nervous system | 1.67e-16 | 54 |
neural tube | 4.28e-15 | 52 |
neural rod | 4.28e-15 | 52 |
future spinal cord | 4.28e-15 | 52 |
neural keel | 4.28e-15 | 52 |
central nervous system | 8.07e-14 | 73 |
brain grey matter | 3.79e-13 | 29 |
regional part of telencephalon | 3.79e-13 | 29 |
telencephalon | 3.79e-13 | 29 |
nervous system | 7.64e-13 | 75 |
neurectoderm | 1.81e-12 | 64 |
neural plate | 1.81e-12 | 64 |
presumptive neural plate | 1.81e-12 | 64 |
brain | 6.55e-12 | 47 |
future brain | 6.55e-12 | 47 |
regional part of brain | 2.42e-11 | 46 |
ectoderm-derived structure | 4.51e-11 | 95 |
ectoderm | 4.51e-11 | 95 |
presumptive ectoderm | 4.51e-11 | 95 |
ecto-epithelium | 4.91e-11 | 73 |
anterior neural tube | 5.00e-11 | 40 |
regional part of forebrain | 1.74e-10 | 39 |
forebrain | 1.74e-10 | 39 |
future forebrain | 1.74e-10 | 39 |
pre-chordal neural plate | 4.17e-10 | 49 |
cerebral cortex | 4.01e-09 | 21 |
cerebral hemisphere | 4.01e-09 | 21 |
pallium | 4.01e-09 | 21 |
regional part of cerebral cortex | 9.87e-09 | 17 |
occipital lobe | 1.85e-08 | 10 |
visual cortex | 1.85e-08 | 10 |
neocortex | 1.85e-08 | 10 |