FFCP PHASE1:Mm9::chr11:116029452..116029519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217335 | |EntrezGene=217335 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=376 | |MCL_coexpression_id=376 | ||
|TSSclassifier=NA | |||
|UniProt=A2A870,A2A872,B7ZN01 | |UniProt=A2A870,A2A872,B7ZN01 | ||
|association_with_transcript=0bp_to_ENSMUST00000103031,ENSMUST00000124828,ENSMUST00000139020,ENSMUST00000148350,NM_172571,uc007mkg.1,uc007mkh.1,uc007mki.1_5end | |association_with_transcript=0bp_to_ENSMUST00000103031,ENSMUST00000124828,ENSMUST00000139020,ENSMUST00000148350,NM_172571,uc007mkg.1,uc007mkh.1,uc007mki.1_5end | ||
|cluster_id=chr11:116029452..116029519,- | |||
|description=CAGE_peak_1_at_Fbf1_5end | |description=CAGE_peak_1_at_Fbf1_5end | ||
|id=chr11:116029452..116029519,- | |id=chr11:116029452..116029519,- | ||
|ontology_enrichment_celltype=CL:0002319!1.58e-11!43;CL:0000221!2.10e-11!44;CL:0000133!2.10e-11!44;CL:0000540!5.48e-09!33;CL:0000047!5.48e-09!33;CL:0000031!5.48e-09!33;CL:0000404!5.48e-09!33;CL:0000055!2.36e-08!50;CL:0000117!2.32e-07!23;CL:0000337!2.32e-07!23 | |ontology_enrichment_celltype=CL:0002319!1.58e-11!43;CL:0000221!2.10e-11!44;CL:0000133!2.10e-11!44;CL:0000540!5.48e-09!33;CL:0000047!5.48e-09!33;CL:0000031!5.48e-09!33;CL:0000404!5.48e-09!33;CL:0000055!2.36e-08!50;CL:0000117!2.32e-07!23;CL:0000337!2.32e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.58e-11,43;CL:0000221,2.10e-11,44;CL:0000133,2.10e-11,44;CL:0000540,5.48e-09,33;CL:0000047,5.48e-09,33;CL:0000031,5.48e-09,33;CL:0000404,5.48e-09,33;CL:0000117,2.32e-07,23;CL:0000337,2.32e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.65e-25!73;UBERON:0005743!7.65e-25!73;UBERON:0000073!3.02e-24!75;UBERON:0001016!3.02e-24!75;UBERON:0004121!1.09e-23!102;UBERON:0000924!1.09e-23!102;UBERON:0006601!1.09e-23!102;UBERON:0002346!2.49e-21!71;UBERON:0003075!2.49e-21!71;UBERON:0007284!2.49e-21!71;UBERON:0000033!2.14e-20!63;UBERON:0003056!2.97e-20!49;UBERON:0001049!7.17e-20!52;UBERON:0005068!7.17e-20!52;UBERON:0006241!7.17e-20!52;UBERON:0007135!7.17e-20!52;UBERON:0000955!4.54e-19!50;UBERON:0006238!4.54e-19!50;UBERON:0002616!1.42e-18!49;UBERON:0003080!5.74e-18!40;UBERON:0002780!1.71e-17!39;UBERON:0001890!1.71e-17!39;UBERON:0006240!1.71e-17!39;UBERON:0000153!6.02e-16!94;UBERON:0002020!7.79e-14!34;UBERON:0002791!9.52e-14!29;UBERON:0003528!9.52e-14!29;UBERON:0001893!9.52e-14!29;UBERON:0007811!1.87e-13!86;UBERON:0000956!2.38e-10!21;UBERON:0001869!2.38e-10!21;UBERON:0000203!2.38e-10!21;UBERON:0002619!3.57e-08!17;UBERON:0000468!1.12e-07!333;UBERON:0000922!2.73e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!7.65e-25!73;UBERON:0005743!7.65e-25!73;UBERON:0000073!3.02e-24!75;UBERON:0001016!3.02e-24!75;UBERON:0004121!1.09e-23!102;UBERON:0000924!1.09e-23!102;UBERON:0006601!1.09e-23!102;UBERON:0002346!2.49e-21!71;UBERON:0003075!2.49e-21!71;UBERON:0007284!2.49e-21!71;UBERON:0000033!2.14e-20!63;UBERON:0003056!2.97e-20!49;UBERON:0001049!7.17e-20!52;UBERON:0005068!7.17e-20!52;UBERON:0006241!7.17e-20!52;UBERON:0007135!7.17e-20!52;UBERON:0000955!4.54e-19!50;UBERON:0006238!4.54e-19!50;UBERON:0002616!1.42e-18!49;UBERON:0003080!5.74e-18!40;UBERON:0002780!1.71e-17!39;UBERON:0001890!1.71e-17!39;UBERON:0006240!1.71e-17!39;UBERON:0000153!6.02e-16!94;UBERON:0002020!7.79e-14!34;UBERON:0002791!9.52e-14!29;UBERON:0003528!9.52e-14!29;UBERON:0001893!9.52e-14!29;UBERON:0007811!1.87e-13!86;UBERON:0000956!2.38e-10!21;UBERON:0001869!2.38e-10!21;UBERON:0000203!2.38e-10!21;UBERON:0002619!3.57e-08!17;UBERON:0000468!1.12e-07!333;UBERON:0000922!2.73e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.75e-25,95;UBERON:0000924,6.75e-25,95;UBERON:0006601,6.75e-25,95;UBERON:0001017,7.65e-25,73;UBERON:0001016,3.02e-24,75;UBERON:0002346,3.60e-23,64;UBERON:0003075,3.60e-23,64;UBERON:0007284,3.60e-23,64;UBERON:0010371,1.79e-21,73;UBERON:0003056,2.97e-20,49;UBERON:0000955,4.99e-20,47;UBERON:0006238,4.99e-20,47;UBERON:0001049,7.17e-20,52;UBERON:0005068,7.17e-20,52;UBERON:0006241,7.17e-20,52;UBERON:0007135,7.17e-20,52;UBERON:0002616,1.58e-19,46;UBERON:0000073,6.38e-19,54;UBERON:0003080,5.74e-18,40;UBERON:0002780,1.71e-17,39;UBERON:0001890,1.71e-17,39;UBERON:0006240,1.71e-17,39;UBERON:0010314,5.02e-14,92;UBERON:0002020,7.79e-14,34;UBERON:0003528,9.52e-14,29;UBERON:0002791,9.52e-14,29;UBERON:0001893,9.52e-14,29;UBERON:0000956,2.38e-10,21;UBERON:0001869,2.38e-10,21;UBERON:0000203,2.38e-10,21;UBERON:0002619,3.57e-08,17 | |||
|phase1_expression=20.8193501236232,1.04692622291808,0.454999239389536,3.62957053568196,2.00358291978539,8.72972213941827,7.00837921786577,8.52213934714403,3.801295498095,6.31974221069382,7.0199366972457,8.45584885350566,7.36163138704185,10.6652890951177,13.3243904726265,11.3386149738303,9.79386629379405,7.88655413395594,8.63820931716154,10.1853516431527,31.721147226349,13.9007331681239,10.9703911438353,4.95976510659561,5.50582274561208,1.72269589234506,2.15380998079537,4.52489588640367,3.23039813075836,3.78045194639896,5.32153225572731,20.9560122241678,20.9122027778754,15.8481681015439,13.5760261283099,10.472782657585,11.8418226632174,2.51118978442145,3.1253413780952,4.18818995179039,1.17646297606203,4.78131839470912,1.94204141212461,18.0032449705076,18.0450937570736,20.3736894899467,21.1245662973971,46.4393583090351,42.1797470850186,38.1082602185596,32.4768498170841,40.250718022192,6.20795642413625,7.97898356212479,7.05796978199174,7.97504251711436,9.45560351797897,12.8918023069361,40.26097571106,26.9785399428737,32.9592329823213,23.041428180701,26.6788438833342,15.7482450524245,13.8441290759376,12.0781619540837,26.3648097256196,32.2743376470106,40.2315695756893,44.6869655877896,43.9579169224388,25.1372866275347,24.5164080456291,39.5645281464302,47.8268900380999,36.7687514644008,14.3150645299205,23.4944702076745,21.5049146558741,49.3254716110925,47.4820870296506,42.7148963856543,26.8015679041326,21.9477417912355,29.1844653253707,22.0971439105251,23.6336990126511,28.519115211271,15.22096485997,23.2004689527832,37.6823835312181,5.16254326188832,0,6.47643829965381,3.89865850468601,1.34408066129201,11.7973312910672,11.930122580464,10.3914401841148,11.6602059588412,21.4081998060554,16.6824420638613,50.9610479413291,35.5533351576666,15.154372870785,16.4683912558814,13.6491600153991,7.76450382089608,17.8667139716548,19.7428044956217,24.4614310740252,18.8768596553528,19.602317266765,20.4982791151567,19.519725384527,15.9596570988688,15.3260879995312,8.24216334443496,18.5768215909474,16.5002186946357,11.4837589599405,14.5462575940567,9.31958806090611,34.255353250351,29.1130922470703,6.64188343542338,6.94927722134338,3.59941638596045,6.86179226194549,32.953940669061,37.972550033946,49.5078147324686,30.7669046740329,32.7315785382823,27.6358099264215,30.1768749306029,17.9237280376557,18.1634177090736,26.2831668771022,13.6787206326208,34.7421582710419,25.0593293832485,27.0093194708024,31.6480117455002,36.739709541717,34.4625907566246,28.5790259907173,28.4573707812917,32.5507669328592,37.632109953396,36.4218827019374,25.4267049615987,33.3656699070717,28.5566776548177,27.3690241422565,30.8503113568664,5.61770549850588,5.40430604940902,5.39910648851626,16.9843133479112,24.390710238034,20.3470129450947,21.7805156738393,22.6278866509514,19.591923336697,15.5797742982773,14.4867636755794,11.2094728672483,12.8356682932515,12.9692296622485,12.3224590509701,13.1579988682799,16.4662586468288,11.541752013392,34.0669716673886,41.0589403393345,4.29544417878937,4.49565963328025,27.0876078179747,30.4230040137174,21.6497335021117,16.3363654944907,13.1203045868473,12.5548913234289,4.74529061544512,6.75265714368445,10.0534083520108,10.1467800740987,10.7230247915516,2.69645822596266,7.78096979548899,7.36822711041159,22.3808123124636,23.4209450849944,24.7957018480777,30.5476991767971,30.2565879981496,21.9525116256697,23.2078091246024,22.4367424928995,16.7988638790271,17.7691916047393,4.44678940630723,17.5187361001899,15.1350426237166,13.4917267430912,10.7515864335907,11.576503668116,9.42115651591253,12.3709339103849,5.67473293712624,6.58947391651396,7.18841032636773,7.07067800570156,8.7370548472077,5.55673531483646,3.94674309748207,4.82443521363367,20.5076041084931,22.9284608242287,27.7040459951444,26.9894686382549,25.3465468151582,33.3337452309213,26.8989314201196,23.2209040950781,33.1033802623001,26.1328333785554,23.9182152986231,20.9745042836145,17.6138681503213,21.6973587872267,12.0633027151418,5.4390568381871,16.2282210096282,17.1080782708934,23.6009367282054,28.7168632150898,14.0984053023941,13.6334300690361,27.1337068697981,24.5976408906882,30.3746990803246,28.6762557543062,33.6425997864415,28.0245765480944,28.7415598189175,25.1340037803728,20.5549644532192,33.0960955914461,24.5556347410305,25.6414469280848,18.4062264069541,23.7556977080451,19.9117707509944,20.6363540731734,19.9533547596736,21.3123740124165,17.7181135728464,13.2197113615889,17.3146956422708,23.9932261455154,18.8943610543902,16.1178746547266,17.9211634577498,20.6271086496374,36.0865982099015,34.0315467719176,39.0663225023919,28.0781515891386,28.3744373827638,31.0361742627603,34.3907453058433,24.9661258273971,11.7335854031855,15.2519091021951,22.934953397716,23.9085066765146,22.7664841641227,20.9888978749982,19.8158091045207,23.6362895632888,7.57850175237612,25.0324157714188,11.1066072518604,21.0514605322487,17.7786746274923,15.25784501738,13.1226458612184,10.5237959675,10.7086410896129,9.09684440103777,8.84479832348312,2.86401185404534,31.3172633645324,26.43153072649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|phase1_expression=20.8193501236232,1.04692622291808,0.454999239389536,3.62957053568196,2.00358291978539,8.72972213941827,7.00837921786577,8.52213934714403,3.801295498095,6.31974221069382,7.0199366972457,8.45584885350566,7.36163138704185,10.6652890951177,13.3243904726265,11.3386149738303,9.79386629379405,7.88655413395594,8.63820931716154,10.1853516431527,31.721147226349,13.9007331681239,10.9703911438353,4.95976510659561,5.50582274561208,1.72269589234506,2.15380998079537,4.52489588640367,3.23039813075836,3.78045194639896,5.32153225572731,20.9560122241678,20.9122027778754,15.8481681015439,13.5760261283099,10.472782657585,11.8418226632174,2.51118978442145,3.1253413780952,4.18818995179039,1.17646297606203,4.78131839470912,1.94204141212461,18.0032449705076,18.0450937570736,20.3736894899467,21.1245662973971,46.4393583090351,42.1797470850186,38.1082602185596,32.4768498170841,40.250718022192,6.20795642413625,7.97898356212479,7.05796978199174,7.97504251711436,9.45560351797897,12.8918023069361,40.26097571106,26.9785399428737,32.9592329823213,23.041428180701,26.6788438833342,15.7482450524245,13.8441290759376,12.0781619540837,26.3648097256196,32.2743376470106,40.2315695756893,44.6869655877896,43.9579169224388,25.1372866275347,24.5164080456291,39.5645281464302,47.8268900380999,36.7687514644008,14.3150645299205,23.4944702076745,21.5049146558741,49.3254716110925,47.4820870296506,42.7148963856543,26.8015679041326,21.9477417912355,29.1844653253707,22.0971439105251,23.6336990126511,28.519115211271,15.22096485997,23.2004689527832,37.6823835312181,5.16254326188832,0,6.47643829965381,3.89865850468601,1.34408066129201,11.7973312910672,11.930122580464,10.3914401841148,11.6602059588412,21.4081998060554,16.6824420638613,50.9610479413291,35.5533351576666,15.154372870785,16.4683912558814,13.6491600153991,7.76450382089608,17.8667139716548,19.7428044956217,24.4614310740252,18.8768596553528,19.602317266765,20.4982791151567,19.519725384527,15.9596570988688,15.3260879995312,8.24216334443496,18.5768215909474,16.5002186946357,11.4837589599405,14.5462575940567,9.31958806090611,34.255353250351,29.1130922470703,6.64188343542338,6.94927722134338,3.59941638596045,6.86179226194549,32.953940669061,37.972550033946,49.5078147324686,30.7669046740329,32.7315785382823,27.6358099264215,30.1768749306029,17.9237280376557,18.1634177090736,26.2831668771022,13.6787206326208,34.7421582710419,25.0593293832485,27.0093194708024,31.6480117455002,36.739709541717,34.4625907566246,28.5790259907173,28.4573707812917,32.5507669328592,37.632109953396,36.4218827019374,25.4267049615987,33.3656699070717,28.5566776548177,27.3690241422565,30.8503113568664,5.61770549850588,5.40430604940902,5.39910648851626,16.9843133479112,24.390710238034,20.3470129450947,21.7805156738393,22.6278866509514,19.591923336697,15.5797742982773,14.4867636755794,11.2094728672483,12.8356682932515,12.9692296622485,12.3224590509701,13.1579988682799,16.4662586468288,11.541752013392,34.0669716673886,41.0589403393345,4.29544417878937,4.49565963328025,27.0876078179747,30.4230040137174,21.6497335021117,16.3363654944907,13.1203045868473,12.5548913234289,4.74529061544512,6.75265714368445,10.0534083520108,10.1467800740987,10.7230247915516,2.69645822596266,7.78096979548899,7.36822711041159,22.3808123124636,23.4209450849944,24.7957018480777,30.5476991767971,30.2565879981496,21.9525116256697,23.2078091246024,22.4367424928995,16.7988638790271,17.7691916047393,4.44678940630723,17.5187361001899,15.1350426237166,13.4917267430912,10.7515864335907,11.576503668116,9.42115651591253,12.3709339103849,5.67473293712624,6.58947391651396,7.18841032636773,7.07067800570156,8.7370548472077,5.55673531483646,3.94674309748207,4.82443521363367,20.5076041084931,22.9284608242287,27.7040459951444,26.9894686382549,25.3465468151582,33.3337452309213,26.8989314201196,23.2209040950781,33.1033802623001,26.1328333785554,23.9182152986231,20.9745042836145,17.6138681503213,21.6973587872267,12.0633027151418,5.4390568381871,16.2282210096282,17.1080782708934,23.6009367282054,28.7168632150898,14.0984053023941,13.6334300690361,27.1337068697981,24.5976408906882,30.3746990803246,28.6762557543062,33.6425997864415,28.0245765480944,28.7415598189175,25.1340037803728,20.5549644532192,33.0960955914461,24.5556347410305,25.6414469280848,18.4062264069541,23.7556977080451,19.9117707509944,20.6363540731734,19.9533547596736,21.3123740124165,17.7181135728464,13.2197113615889,17.3146956422708,23.9932261455154,18.8943610543902,16.1178746547266,17.9211634577498,20.6271086496374,36.0865982099015,34.0315467719176,39.0663225023919,28.0781515891386,28.3744373827638,31.0361742627603,34.3907453058433,24.9661258273971,11.7335854031855,15.2519091021951,22.934953397716,23.9085066765146,22.7664841641227,20.9888978749982,19.8158091045207,23.6362895632888,7.57850175237612,25.0324157714188,11.1066072518604,21.0514605322487,17.7786746274923,15.25784501738,13.1226458612184,10.5237959675,10.7086410896129,9.09684440103777,8.84479832348312,2.86401185404534,31.3172633645324,26.43153072649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| ||
|short_description=p1@Fbf1 | |short_description=p1@Fbf1 | ||
}} | }} |
Latest revision as of 00:01, 27 September 2015
Short description: | p1@Fbf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fbf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 0bp_to_ENSMUST00000103031, ENSMUST00000124828, ENSMUST00000139020, ENSMUST00000148350, NM_172571, uc007mkg.1, uc007mkh.1, uc007mki.1_5end |
EntrezGene: | Fbf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.58e-11 | 43 |
ectodermal cell | 2.10e-11 | 44 |
neurectodermal cell | 2.10e-11 | 44 |
neuron | 5.48e-09 | 33 |
neuronal stem cell | 5.48e-09 | 33 |
neuroblast | 5.48e-09 | 33 |
electrically signaling cell | 5.48e-09 | 33 |
CNS neuron (sensu Vertebrata) | 2.32e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.32e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.75e-25 | 95 |
ectoderm | 6.75e-25 | 95 |
presumptive ectoderm | 6.75e-25 | 95 |
central nervous system | 7.65e-25 | 73 |
nervous system | 3.02e-24 | 75 |
neurectoderm | 3.60e-23 | 64 |
neural plate | 3.60e-23 | 64 |
presumptive neural plate | 3.60e-23 | 64 |
ecto-epithelium | 1.79e-21 | 73 |
pre-chordal neural plate | 2.97e-20 | 49 |
brain | 4.99e-20 | 47 |
future brain | 4.99e-20 | 47 |
neural tube | 7.17e-20 | 52 |
neural rod | 7.17e-20 | 52 |
future spinal cord | 7.17e-20 | 52 |
neural keel | 7.17e-20 | 52 |
regional part of brain | 1.58e-19 | 46 |
regional part of nervous system | 6.38e-19 | 54 |
anterior neural tube | 5.74e-18 | 40 |
regional part of forebrain | 1.71e-17 | 39 |
forebrain | 1.71e-17 | 39 |
future forebrain | 1.71e-17 | 39 |
structure with developmental contribution from neural crest | 5.02e-14 | 92 |
gray matter | 7.79e-14 | 34 |
brain grey matter | 9.52e-14 | 29 |
regional part of telencephalon | 9.52e-14 | 29 |
telencephalon | 9.52e-14 | 29 |
cerebral cortex | 2.38e-10 | 21 |
cerebral hemisphere | 2.38e-10 | 21 |
pallium | 2.38e-10 | 21 |
regional part of cerebral cortex | 3.57e-08 | 17 |