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FFCP PHASE1:Mm9::chr4:48057987..48057996,+: Difference between revisions

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(Created page with "{{FFCP |id=chr4:48057987..48057996,+ |short_description=p7@Nr4a3 |description=CAGE_peak_7_at_Nr4a3_5end |association_with_transcript=-28bp_to_ENSMUST00000030025_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chr4:48057987..48057996,+
|DHSsupport=NA
|short_description=p7@Nr4a3
|DPIdataset=NA
|description=CAGE_peak_7_at_Nr4a3_5end
|association_with_transcript=-28bp_to_ENSMUST00000030025_5end
|EntrezGene=18124
|EntrezGene=18124
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q9QZB6
|UniProt=Q9QZB6
|association_with_transcript=-28bp_to_ENSMUST00000030025_5end
|cluster_id=chr4:48057987..48057996,+
|description=CAGE_peak_7_at_Nr4a3_5end
|id=chr4:48057987..48057996,+
|ontology_enrichment_celltype=CL:0000791!5.24e-08!9;CL:0000789!5.24e-08!9;CL:0002420!5.24e-08!9;CL:0002419!5.24e-08!9;CL:0000790!5.24e-08!9;CL:0000624!2.83e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,1.72e-20,9;CL:0000789,1.72e-20,9;CL:0002420,1.72e-20,9;CL:0002419,1.72e-20,9;CL:0000790,1.72e-20,9;CL:0000624,2.40e-18,8;CL:0000838,3.97e-18,12;CL:0000542,1.50e-16,13;CL:0000051,1.50e-16,13;CL:0000084,2.14e-16,11;CL:0000827,2.14e-16,11;CL:0000893,3.83e-14,6;CL:0002489,3.83e-14,6;CL:0000898,3.83e-14,6;CL:0000809,3.83e-14,6;CL:0000810,3.83e-14,6;CL:0000895,3.83e-14,6;CL:0000808,3.83e-14,6;CL:0000894,3.83e-14,6;CL:0000806,3.83e-14,6;CL:0000807,3.83e-14,6;CL:0000805,3.83e-14,6;CL:0002425,3.83e-14,6;CL:0002436,3.83e-14,6;CL:0002427,3.83e-14,6;CL:0002428,3.83e-14,6;CL:0002429,3.83e-14,6;CL:0002433,3.83e-14,6;CL:0002431,3.83e-14,6;CL:0002432,3.83e-14,6;CL:0000738,4.16e-12,17;CL:0002087,4.16e-12,17;CL:0002031,1.63e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.19e-12!52;UBERON:0005068!2.19e-12!52;UBERON:0006241!2.19e-12!52;UBERON:0007135!2.19e-12!52;UBERON:0000955!8.95e-12!50;UBERON:0006238!8.95e-12!50;UBERON:0003080!2.37e-11!40;UBERON:0002616!3.24e-11!49;UBERON:0001017!3.82e-11!73;UBERON:0005743!3.82e-11!73;UBERON:0002780!3.85e-11!39;UBERON:0001890!3.85e-11!39;UBERON:0006240!3.85e-11!39;UBERON:0000073!6.00e-11!75;UBERON:0001016!6.00e-11!75;UBERON:0002020!9.51e-11!34;UBERON:0004121!4.43e-10!102;UBERON:0000924!4.43e-10!102;UBERON:0006601!4.43e-10!102;UBERON:0002791!8.90e-10!29;UBERON:0003528!8.90e-10!29;UBERON:0001893!8.90e-10!29;UBERON:0000033!1.59e-09!63;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0007811!4.08e-09!86;UBERON:0000153!4.51e-08!94;UBERON:0003056!9.98e-08!49;UBERON:0000956!2.01e-07!21;UBERON:0001869!2.01e-07!21;UBERON:0000203!2.01e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.65e-13,10;UBERON:0000411,3.65e-13,10;UBERON:0001950,3.65e-13,10;UBERON:0002619,1.70e-11,17;UBERON:0003528,1.72e-11,29;UBERON:0002791,1.72e-11,29;UBERON:0001893,1.72e-11,29;UBERON:0000956,8.60e-11,21;UBERON:0001869,8.60e-11,21;UBERON:0000203,8.60e-11,21;UBERON:0002020,9.53e-11,34;UBERON:0002780,6.62e-09,39;UBERON:0001890,6.62e-09,39;UBERON:0006240,6.62e-09,39;UBERON:0003080,1.35e-08,40;UBERON:0000073,2.67e-08,54;UBERON:0000955,6.21e-08,47;UBERON:0006238,6.21e-08,47;UBERON:0002616,4.92e-07,46;UBERON:0001049,9.55e-07,52;UBERON:0005068,9.55e-07,52;UBERON:0006241,9.55e-07,52;UBERON:0007135,9.55e-07,52
|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0.500895729946347,0.503637815735669,0,3.61545305636414,20.1327872676883,29.4921303165712,8.21846247482424,4.30769658574817,2.56801094896809,2.71003247498892,0,0,0,0.630924330716475,0,0.84877930359606,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,1.5626706890476,0,2.35292595212406,1.36609096991689,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0,1.43752564364972,1.8456086666351,7.25362142011344,6.38578218370682,0,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.933206510776299,0.540023753326763,0.210324961351382,0.571301968807607,0.220868540951614,0.367472397644862,0.191690942036473,0,0,1.0214987046815,1.38245879930619,0.527545150920775,0.731901148819277,1.04182674111352,0.279182999001381,1.12552522006336,1.37518422999129,0.294628585473668,0.427115042397309,1.3047961207771,0.151452386666368,0.151143120213571,2.02905142091174,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,2.07150306917737,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0.247194967734374,1.01219549843938,0.884610551949874,0.647067399789637,0.220841518460394,0,0,0.585561594023094,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0.449371918214468,0.457500602818626,0.251308704225729,2.08589184230732,1.02286182932132,0.62336413367868,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0,0,0.360124259610698,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.61734640922383,0,0.702213187313235,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.162137619091711,0.730999937126662,0.878200461164203,0.268412837520744,5.67782861123144,7.30622747892919,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0,0.809621403349789,0,0.395287777946524,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.214337035031592,1.24138163549592,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.0603129249281559,0,0.328281799490123,0.582961673259701,0.927126510052548,0,0,0,0,0.410082683163076,0,2.37969801991397,2.6590775941495,1.38199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0.288635524920988,0.467507608726276,1.36038230169127,0,0.179427713218951,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,1.84130094602871,2.29158205375759,3.09335728218638,2.74033007908257,0,2.70009000092722,1.80128481289688,0.906284817968409,5.69536342927002,0,0.399024873401031,0.170733605754134,0,0.628839487883947,0.183843508450014,0,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0.468207537349412,0.192075457214608,0.459483751644906,1.42888107384922,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0.695603506861264
|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0.500895729946347,0.503637815735669,0,3.61545305636414,20.1327872676883,29.4921303165712,8.21846247482424,4.30769658574817,2.56801094896809,2.71003247498892,0,0,0,0.630924330716475,0,0.84877930359606,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,1.5626706890476,0,2.35292595212406,1.36609096991689,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0,1.43752564364972,1.8456086666351,7.25362142011344,6.38578218370682,0,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.933206510776299,0.540023753326763,0.210324961351382,0.571301968807607,0.220868540951614,0.367472397644862,0.191690942036473,0,0,1.0214987046815,1.38245879930619,0.527545150920775,0.731901148819277,1.04182674111352,0.279182999001381,1.12552522006336,1.37518422999129,0.294628585473668,0.427115042397309,1.3047961207771,0.151452386666368,0.151143120213571,2.02905142091174,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,2.07150306917737,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0.247194967734374,1.01219549843938,0.884610551949874,0.647067399789637,0.220841518460394,0,0,0.585561594023094,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0.449371918214468,0.457500602818626,0.251308704225729,2.08589184230732,1.02286182932132,0.62336413367868,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0,0,0.360124259610698,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.61734640922383,0,0.702213187313235,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.162137619091711,0.730999937126662,0.878200461164203,0.268412837520744,5.67782861123144,7.30622747892919,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0,0.809621403349789,0,0.395287777946524,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.214337035031592,1.24138163549592,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.0603129249281559,0,0.328281799490123,0.582961673259701,0.927126510052548,0,0,0,0,0.410082683163076,0,2.37969801991397,2.6590775941495,1.38199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0.288635524920988,0.467507608726276,1.36038230169127,0,0.179427713218951,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,1.84130094602871,2.29158205375759,3.09335728218638,2.74033007908257,0,2.70009000092722,1.80128481289688,0.906284817968409,5.69536342927002,0,0.399024873401031,0.170733605754134,0,0.628839487883947,0.183843508450014,0,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0.468207537349412,0.192075457214608,0.459483751644906,1.42888107384922,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0.695603506861264
|short_description=p7@Nr4a3
}}
}}

Latest revision as of 01:41, 27 September 2015

Short description:p7@Nr4a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Nr4a3_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -28bp_to_ENSMUST00000030025_5end
EntrezGene:Nr4a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Nr4a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G17.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.72e-209
alpha-beta T cell1.72e-209
immature T cell1.72e-209
mature T cell1.72e-209
immature alpha-beta T cell1.72e-209
CD4-positive, alpha-beta T cell2.40e-188
lymphoid lineage restricted progenitor cell3.97e-1812
lymphocyte1.50e-1613
common lymphoid progenitor1.50e-1613
T cell2.14e-1611
pro-T cell2.14e-1611
thymocyte3.83e-146
double negative thymocyte3.83e-146
naive T cell3.83e-146
double-positive, alpha-beta thymocyte3.83e-146
CD4-positive, alpha-beta thymocyte3.83e-146
naive thymus-derived CD4-positive, alpha-beta T cell3.83e-146
DN4 thymocyte3.83e-146
DN1 thymic pro-T cell3.83e-146
DN2 thymocyte3.83e-146
DN3 thymocyte3.83e-146
immature single positive thymocyte3.83e-146
early T lineage precursor3.83e-146
mature CD4 single-positive thymocyte3.83e-146
resting double-positive thymocyte3.83e-146
double-positive blast3.83e-146
CD69-positive double-positive thymocyte3.83e-146
CD69-positive, CD4-positive single-positive thymocyte3.83e-146
CD4-positive, CD8-intermediate double-positive thymocyte3.83e-146
CD24-positive, CD4 single-positive thymocyte3.83e-146
leukocyte4.16e-1217
nongranular leukocyte4.16e-1217
hematopoietic lineage restricted progenitor cell1.63e-0725

Uber anatomy
Ontology termp-valuen
occipital lobe3.65e-1310
visual cortex3.65e-1310
neocortex3.65e-1310
regional part of cerebral cortex1.70e-1117
brain grey matter1.72e-1129
regional part of telencephalon1.72e-1129
telencephalon1.72e-1129
cerebral cortex8.60e-1121
cerebral hemisphere8.60e-1121
pallium8.60e-1121
gray matter9.53e-1134
regional part of forebrain6.62e-0939
forebrain6.62e-0939
future forebrain6.62e-0939
anterior neural tube1.35e-0840
regional part of nervous system2.67e-0854
brain6.21e-0847
future brain6.21e-0847
regional part of brain4.92e-0746
neural tube9.55e-0752
neural rod9.55e-0752
future spinal cord9.55e-0752
neural keel9.55e-0752
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