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FFCP PHASE1:Mm9::chr2:84727165..84727201,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269295
|EntrezGene=269295
|HGNC=
|HGNC=
|MCL_coexpression_id=731
|TSSclassifier=NA
|UniProt=A2ATS6
|UniProt=A2ATS6
|association_with_transcript=-298bp_to_ENSMUST00000151799_5end
|association_with_transcript=-298bp_to_ENSMUST00000151799_5end
|cluster_id=chr2:84727165..84727201,-
|description=CAGE_peak_1_at_Rtn4rl2_5end
|description=CAGE_peak_1_at_Rtn4rl2_5end
|id=chr2:84727165..84727201,-
|id=chr2:84727165..84727201,-
|ontology_enrichment_celltype=CL:0000117!2.46e-08!23;CL:0000337!2.46e-08!23;CL:0000393!1.16e-07!39;CL:0000211!1.16e-07!39;CL:0000540!3.02e-07!33;CL:0000047!3.02e-07!33;CL:0000031!3.02e-07!33;CL:0000404!3.02e-07!33;CL:0000221!3.35e-07!44;CL:0000133!3.35e-07!44;CL:0000055!6.65e-07!50;CL:0002319!8.85e-07!43
|ontology_enrichment_celltype=CL:0000117!2.46e-08!23;CL:0000337!2.46e-08!23;CL:0000393!1.16e-07!39;CL:0000211!1.16e-07!39;CL:0000540!3.02e-07!33;CL:0000047!3.02e-07!33;CL:0000031!3.02e-07!33;CL:0000404!3.02e-07!33;CL:0000221!3.35e-07!44;CL:0000133!3.35e-07!44;CL:0000055!6.65e-07!50;CL:0002319!8.85e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-08,23;CL:0000337,1.72e-08,23;CL:0000393,1.22e-07,39;CL:0000211,1.22e-07,39;CL:0000540,2.24e-07,33;CL:0000047,2.24e-07,33;CL:0000031,2.24e-07,33;CL:0000404,2.24e-07,33;CL:0000221,2.73e-07,44;CL:0000133,2.73e-07,44;CL:0002319,7.35e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!7.64e-18!49;UBERON:0004121!2.41e-16!102;UBERON:0000924!2.41e-16!102;UBERON:0006601!2.41e-16!102;UBERON:0000033!2.43e-16!63;UBERON:0002780!1.33e-15!39;UBERON:0001890!1.33e-15!39;UBERON:0006240!1.33e-15!39;UBERON:0001017!1.70e-15!73;UBERON:0005743!1.70e-15!73;UBERON:0000073!3.77e-15!75;UBERON:0001016!3.77e-15!75;UBERON:0003080!5.77e-15!40;UBERON:0002346!1.11e-14!71;UBERON:0003075!1.11e-14!71;UBERON:0007284!1.11e-14!71;UBERON:0002020!2.51e-14!34;UBERON:0002791!8.79e-14!29;UBERON:0003528!8.79e-14!29;UBERON:0001893!8.79e-14!29;UBERON:0000955!2.94e-13!50;UBERON:0006238!2.94e-13!50;UBERON:0002616!1.02e-12!49;UBERON:0001049!2.83e-12!52;UBERON:0005068!2.83e-12!52;UBERON:0006241!2.83e-12!52;UBERON:0007135!2.83e-12!52;UBERON:0000956!7.22e-12!21;UBERON:0001869!7.22e-12!21;UBERON:0000203!7.22e-12!21;UBERON:0002619!2.41e-09!17;UBERON:0000025!1.70e-08!114;UBERON:0007811!3.26e-08!86;UBERON:0002021!5.56e-08!10;UBERON:0000411!5.56e-08!10;UBERON:0001950!5.56e-08!10;UBERON:0004111!5.60e-08!122;UBERON:0000153!7.43e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.58e-20,92;UBERON:0003056,3.23e-18,49;UBERON:0004121,3.49e-16,95;UBERON:0000924,3.49e-16,95;UBERON:0006601,3.49e-16,95;UBERON:0002780,6.33e-16,39;UBERON:0001890,6.33e-16,39;UBERON:0006240,6.33e-16,39;UBERON:0001017,1.05e-15,73;UBERON:0001016,2.36e-15,75;UBERON:0003080,2.84e-15,40;UBERON:0002346,5.33e-15,64;UBERON:0003075,5.33e-15,64;UBERON:0007284,5.33e-15,64;UBERON:0002020,1.28e-14,34;UBERON:0010371,2.67e-14,73;UBERON:0003528,4.61e-14,29;UBERON:0002791,4.61e-14,29;UBERON:0001893,4.61e-14,29;UBERON:0000073,9.65e-14,54;UBERON:0000955,1.46e-12,47;UBERON:0006238,1.46e-12,47;UBERON:0001049,2.08e-12,52;UBERON:0005068,2.08e-12,52;UBERON:0006241,2.08e-12,52;UBERON:0007135,2.08e-12,52;UBERON:0000956,4.19e-12,21;UBERON:0001869,4.19e-12,21;UBERON:0000203,4.19e-12,21;UBERON:0002616,5.12e-12,46;UBERON:0002619,1.60e-09,17;UBERON:0002021,3.96e-08,10;UBERON:0000411,3.96e-08,10;UBERON:0001950,3.96e-08,10;UBERON:0000025,1.24e-07,114;UBERON:0004111,6.95e-07,122
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237198,0.501572104035363,97.7020687727525,85.1601687538277,88.7988045831065,77.8494916016905,56.8618491409633,71.0070263546318,85.7278575294393,81.5081377835839,75.6747823003622,83.359410192043,2.69847103718859,7.98049746802062,6.31714341290296,5.83456120963906,3.35381060204772,4.22840069435032,4.22268782823069,5.15087643097235,3.20919209591815,3.28506375292937,3.04175159868288,4.33840585187975,4.40115085108447,6.53056554529667,4.307660171671,4.28664322154766,5.33067899346335,3.6652751888104,6.59337441285291,5.88795680537589,5.82877729055206,4.2594193478241,5.96090474868302,3.63366041580821,3.48204707536723,4.39995961036718,5.48783918618318,5.26139422875686,2.71608227691724,7.85599180320834,5.33857581558784,4.13718825977367,4.50154147486658,4.64810523557898,5.98010494041538,15.4882558321526,4.91256377735358,5.58664740525576,4.97349663378993,1.98532277207564,1.15933917810211
|phase1_expression=55.8919476395731,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0.999329285446988,0.607425802169478,0,0,0,0,11.3107575900923,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,34.2916563668201,43.0545351309199,47.5445043046316,0,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,0.202753862439029,4.77221555620372,3.12956537739216,0.436050312760893,1.31811709640683,1.94429899074283,1.95980990275508,10.062679505548,0,0,0,39.1034342774639,32.0917452731408,32.4873418134789,12.7459370341547,15.340738398889,14.5781222806421,0,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,22.7696083993988,14.9845139075406,55.9923906465779,52.5173100110277,55.9464397194676,3.42781181284564,6.84692476950002,22.5383070555515,18.4981759065196,20.2228133054205,3.30347642998166,15.1947932321373,9.98442466165583,9.75958529203434,11.3444678066988,14.0646610050325,1.67509799400829,4.50210088025344,15.5854212732346,4.71405736757868,4.41352210477219,7.82877672466262,1.28734528666413,3.40072020480535,10.4351215932604,0.860423876981386,0.679971333707751,0,0.649776417447669,0,4.21333260395256,1.1930122580464,0.779358013808606,0.35333957451034,24.6475984609191,12.8326477414318,20.3844191765317,21.3320010945999,0.216491041011214,0,0,4.22480354960522,12.6879562987114,3.71105347662062,2.60227990149204,4.87144765299426,3.92046345335299,2.71300752994721,4.23319345688537,2.13633205260448,1.48316980640624,7.22996784599558,0.884610551949874,0.808834249737046,1.10420759230197,0.484875253135222,1.86391761218122,0.878342391034642,0,2.81002760729451,0,0,0,1.19832511523858,20.1300265240196,8.67015029578764,102.730173233635,79.2717917724025,7.2725815595846,18.9822277789276,13.9519928474933,1.61729061793121,0.758168275301024,7.57590681191306,2.86264974517948,7.81667155073808,12.4242869565691,8.28876498096433,11.3620953582718,5.89323113310309,9.18276900685342,26.6464471861186,0.862271971731369,2.64748512234947,1.93546236580344,2.41115305670332,3.33656699070717,3.1342694986995,1.02891068203972,0.995171334092466,0,0,0,1.65700618028402,1.64168241986767,2.70093092191522,6.15536312521547,6.49321964766433,6.32495162838251,7.90615412151387,6.17028823219124,12.1435956061856,5.10135534731789,5.08919138645195,8.26901857367728,5.99419948443863,6.14740322814942,8.72341721942416,102.200915002166,98.3768094345959,0.660837565967596,2.90895623329899,5.54549451391608,3.25131340604614,2.31961430379768,3.02525286935014,2.66853652613844,2.85338439168839,2.37264530772256,6.42325923423642,2.26201687920243,1.79060824837036,2.9244613067868,1.79763881730844,1.51296634912286,2.98711909881551,5.31070122668629,2.97046132785295,1.1270773567308,3.46207257337034,2.13347735884388,3.29638353484497,1.01178459398812,1.62371162777562,1.255989822731,2.96153193412321,1.77871576252289,0.667380422864376,0.982794975566015,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.863088412352432,1.29708181420028,0.274561413188081,2.87536413054709,1.86070473834252,0.936113019343682,1.26289438973556,0.717589654087649,3.85954817090694,6.65111484599777,2.84237117655727,2.44447464663039,1.52770577197669,2.11221223459652,3.01511263395268,5.47500374037832,13.0739544064725,1.89162172927429,3.10050565508285,1.59454768657487,3.11340297959902,2.93564469172023,6.94315481191256,0,0,4.91764273019036,1.65562047782839,2.88991061978026,1.99259867206745,10.9836413402373,1.00988370881749,2.52406575533005,2.73307121007647,3.23135096599198,2.38968797952552,1.78238939265915,2.83076530788832,4.04810701674894,2.33804686329049,2.76701444562566,33.7387382242897,4.11626247103979,4.98583690268315,9.61033060186099,1.81467135269789,2.65490276679926,5.58395463156457,3.02323556964751,4.14931175462976,8.56375489354241,6.7635732547664,15.5056975900933,5.08947221268508,2.49548164869305,2.84433082142234,1.05418608574999,2.06271086496374,8.85142974959849,1.08036656418786,2.97524972700335,5.14408884075822,5.85222771019503,9.45354733290974,11.0247843803421,15.8321773539592,2.11204537257339,1.0591603543191,0.882113592219848,6.10079135883476,1.77610869365496,1.02531972377865,0.596861720015682,1.14898629821543,3.78925087618806,1.11255181206306,3.2465467351592,1.857481811669,2.96311243791539,0.565105371014073,1.77702496037333,1.37266903923914,0,0,0,0.954670618015114,2.05618395827738,2.43983360552218,1.72808545314882,0.627264888043406,2.83871332870031,1.88810084938749,1.57041565878138,0.785267825952089,2.46268449254406,1.86401793926078,1.12738587736838,0,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.87771581833206,1.3020438484395,0.524296722128554,0,1.44015003128933,1.58005560314089,7.50083296573608,3.08132871494482,2.5984164595559,0.716106782669926,0.993406773906324,0,0.295379054349154,0.706765149637033,0.457240839929999,0.504130925684203,0.0974578807397524,0.192423683280659,0.233753804363138,0.680191150845634,0.887943813496259,0.897138566094757,0.335769232728157,2.51146472241848,4.129014459926,1.28206136987086,0.643105137237198,0.501572104035363,97.7020687727525,85.1601687538277,88.7988045831065,77.8494916016905,56.8618491409633,71.0070263546318,85.7278575294393,81.5081377835839,75.6747823003622,83.359410192043,2.69847103718859,7.98049746802062,6.31714341290296,5.83456120963906,3.35381060204772,4.22840069435032,4.22268782823069,5.15087643097235,3.20919209591815,3.28506375292937,3.04175159868288,4.33840585187975,4.40115085108447,6.53056554529667,4.307660171671,4.28664322154766,5.33067899346335,3.6652751888104,6.59337441285291,5.88795680537589,5.82877729055206,4.2594193478241,5.96090474868302,3.63366041580821,3.48204707536723,4.39995961036718,5.48783918618318,5.26139422875686,2.71608227691724,7.85599180320834,5.33857581558784,4.13718825977367,4.50154147486658,4.64810523557898,5.98010494041538,15.4882558321526,4.91256377735358,5.58664740525576,4.97349663378993,1.98532277207564,1.15933917810211
|short_description=p1@Rtn4rl2
|short_description=p1@Rtn4rl2
}}
}}

Latest revision as of 01:55, 27 September 2015

Short description:p1@Rtn4rl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtn4rl2_5end
Coexpression cluster:MCL_coexpression_mm9:731
Association with transcript: -298bp_to_ENSMUST00000151799_5end
EntrezGene:Rtn4rl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtn4rl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G755.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G643.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C139.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.09
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C532.49
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C822.77
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D555.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.52
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D955.95
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.54
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D5102.73
cortex, neonate N30.CNhs11107.1392-42F279.27
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C912.42
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C611.36
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G89.18
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C66.32
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E312.14
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G18.27
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D28.72
hippocampus, adult.CNhs10478.13-16E8102.20
hippocampus, neonate N00.CNhs11228.627-43G198.38
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C613.07
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I933.74
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I49.61
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G915.51
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A197.70
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A285.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A388.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D777.85
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A456.86
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A571.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A685.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A781.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A875.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A983.36
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.72e-0823
neuroblast (sensu Vertebrata)1.72e-0823
electrically responsive cell1.22e-0739
electrically active cell1.22e-0739
neuron2.24e-0733
neuronal stem cell2.24e-0733
neuroblast2.24e-0733
electrically signaling cell2.24e-0733
ectodermal cell2.73e-0744
neurectodermal cell2.73e-0744
neural cell7.35e-0743

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.58e-2092
pre-chordal neural plate3.23e-1849
ectoderm-derived structure3.49e-1695
ectoderm3.49e-1695
presumptive ectoderm3.49e-1695
regional part of forebrain6.33e-1639
forebrain6.33e-1639
future forebrain6.33e-1639
central nervous system1.05e-1573
nervous system2.36e-1575
anterior neural tube2.84e-1540
neurectoderm5.33e-1564
neural plate5.33e-1564
presumptive neural plate5.33e-1564
gray matter1.28e-1434
ecto-epithelium2.67e-1473
brain grey matter4.61e-1429
regional part of telencephalon4.61e-1429
telencephalon4.61e-1429
regional part of nervous system9.65e-1454
brain1.46e-1247
future brain1.46e-1247
neural tube2.08e-1252
neural rod2.08e-1252
future spinal cord2.08e-1252
neural keel2.08e-1252
cerebral cortex4.19e-1221
cerebral hemisphere4.19e-1221
pallium4.19e-1221
regional part of brain5.12e-1246
regional part of cerebral cortex1.60e-0917
occipital lobe3.96e-0810
visual cortex3.96e-0810
neocortex3.96e-0810
tube1.24e-07114
anatomical conduit6.95e-07122
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