FFCP PHASE1:Mm9::chr18:16967125..16967186,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:16967125..16967186,- to FFCP PHASE1:Mm9::chr18:16967125..16967186,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12558 | |EntrezGene=12558 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-154bp_to_ENSMUST00000152779_5end | |||
|cluster_id=chr18:16967125..16967186,- | |||
|description=CAGE_peak_5_at_Cdh2_5end | |||
|id=chr18:16967125..16967186,- | |||
|ontology_enrichment_celltype=CL:0000117!2.06e-12!23;CL:0000337!2.06e-12!23;CL:0000393!6.72e-12!39;CL:0000211!6.72e-12!39;CL:0000540!9.57e-12!33;CL:0000047!9.57e-12!33;CL:0000031!9.57e-12!33;CL:0000404!9.57e-12!33;CL:0000055!3.33e-11!50;CL:0002319!5.88e-11!43;CL:0000221!9.86e-11!44;CL:0000133!9.86e-11!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.74e-14,23;CL:0000337,3.74e-14,23;CL:0000540,1.63e-12,33;CL:0000047,1.63e-12,33;CL:0000031,1.63e-12,33;CL:0000404,1.63e-12,33;CL:0000393,1.50e-11,39;CL:0000211,1.50e-11,39;CL:0002319,2.24e-11,43;CL:0000221,8.64e-11,44;CL:0000133,8.64e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.04e-27!71;UBERON:0003075!5.04e-27!71;UBERON:0007284!5.04e-27!71;UBERON:0001017!4.82e-25!73;UBERON:0005743!4.82e-25!73;UBERON:0000073!6.61e-25!75;UBERON:0001016!6.61e-25!75;UBERON:0004121!1.17e-22!102;UBERON:0000924!1.17e-22!102;UBERON:0006601!1.17e-22!102;UBERON:0000033!1.65e-22!63;UBERON:0001049!1.90e-22!52;UBERON:0005068!1.90e-22!52;UBERON:0006241!1.90e-22!52;UBERON:0007135!1.90e-22!52;UBERON:0003056!1.34e-21!49;UBERON:0000955!2.11e-21!50;UBERON:0006238!2.11e-21!50;UBERON:0002616!8.13e-21!49;UBERON:0000025!7.39e-19!114;UBERON:0003080!2.94e-18!40;UBERON:0002780!1.17e-17!39;UBERON:0001890!1.17e-17!39;UBERON:0006240!1.17e-17!39;UBERON:0002020!3.27e-17!34;UBERON:0004111!1.18e-15!122;UBERON:0002791!4.48e-15!29;UBERON:0003528!4.48e-15!29;UBERON:0001893!4.48e-15!29;UBERON:0000956!1.75e-11!21;UBERON:0001869!1.75e-11!21;UBERON:0000203!1.75e-11!21;UBERON:0007811!2.52e-09!86;UBERON:0000153!4.00e-09!94;UBERON:0002619!8.49e-09!17;UBERON:0007100!2.96e-08!18;UBERON:0000948!2.96e-08!18;UBERON:0005498!2.96e-08!18;UBERON:0004140!2.96e-08!18;UBERON:0009881!2.96e-08!18;UBERON:0004141!2.96e-08!18;UBERON:0003084!2.96e-08!18;UBERON:0007005!2.96e-08!18;UBERON:0004139!2.96e-08!18;UBERON:0004291!2.96e-08!18;UBERON:0000468!3.34e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.03e-40,92;UBERON:0002346,5.33e-31,64;UBERON:0003075,5.33e-31,64;UBERON:0007284,5.33e-31,64;UBERON:0001017,4.64e-28,73;UBERON:0001016,2.71e-27,75;UBERON:0000073,5.59e-27,54;UBERON:0001049,3.85e-26,52;UBERON:0005068,3.85e-26,52;UBERON:0006241,3.85e-26,52;UBERON:0007135,3.85e-26,52;UBERON:0003056,7.97e-25,49;UBERON:0010371,2.43e-24,73;UBERON:0004121,3.72e-24,95;UBERON:0000924,3.72e-24,95;UBERON:0006601,3.72e-24,95;UBERON:0000955,1.42e-23,47;UBERON:0006238,1.42e-23,47;UBERON:0002616,6.71e-23,46;UBERON:0003080,6.06e-21,40;UBERON:0002780,3.02e-20,39;UBERON:0001890,3.02e-20,39;UBERON:0006240,3.02e-20,39;UBERON:0002020,9.94e-20,34;UBERON:0003528,3.02e-17,29;UBERON:0002791,3.02e-17,29;UBERON:0001893,3.02e-17,29;UBERON:0000025,9.66e-16,114;UBERON:0004111,3.13e-13,122;UBERON:0000956,4.48e-13,21;UBERON:0001869,4.48e-13,21;UBERON:0000203,4.48e-13,21;UBERON:0002619,5.83e-10,17;UBERON:0007100,2.48e-09,18;UBERON:0000948,2.48e-09,18;UBERON:0005498,2.48e-09,18;UBERON:0004140,2.48e-09,18;UBERON:0009881,2.48e-09,18;UBERON:0004141,2.48e-09,18;UBERON:0003084,2.48e-09,18;UBERON:0007005,2.48e-09,18;UBERON:0004139,2.48e-09,18;UBERON:0004291,2.48e-09,18 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.912392380975631,0.734187008646726,0,3.2703773457067,4.61340983742391,3.4997381833371,2.09979632438044,0,0,0,0,3.60163210450326,2.29226751951005,3.6097046459421,9.91350658212029,7.40587370980846,9.50747105259269,1.35537812827653,1.77858959222228,0,0,0,0.599200221036809,1.53687322128622,14.9313041724208,18.4958135514416,17.8776217148675,2.85650984403804,2.87129103237098,14.6988959057945,15.9103481890272,17.4651569455904,2.20231761998777,3.83062014255563,4.14737639791857,9.36392642884376,8.78281378583133,10.939180781692,2.23346399201105,3.37657566019008,1.5279824777681,4.12480019663135,3.41692033917847,9.13357284543973,0.984440513331393,1.51143120213571,0.289864488701678,0.860423876981386,2.03991400112325,0,0,0.448026887097336,0.421333260395256,0.511290967734173,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,0,0,0,1.25602267690966,0,2.3750742250372,2.77576522825817,1.21786191324856,1.38369298353635,0.753613202763113,2.58695155698551,1.50799909595611,0.247194967734374,0.86759614151947,0,1.29413479957927,0.441683036920787,0.969750506270444,0,10.2473278954042,9.00620839297857,0.255457055208591,0,0,0,5.84183493678809,6.8625090422794,34.303638126812,9.56033761057521,6.13717097592793,4.57133698031032,6.81413304884582,0.81471491080253,0.995255764880744,0,2.10441855886474,2.08192708740326,2.75882525320168,3.24111833649629,2.41127708537144,5.03470093719826,5.25266253167884,6.27801554550183,4.13925393182425,0.215567992932842,1.32374256117473,1.58356011747554,1.31517439456545,2.22437799380478,1.39300866608867,1.23469281844766,2.18937693500343,0,0,0,2.48550927042602,5.39409937956521,4.50155153652537,3.55117103377815,5.3126342571799,3.23960937063494,4.65067889500816,3.21928081679543,5.48797109125697,4.60767579757745,3.11918181750281,3.56702762001765,3.36259971078264,3.29325172936576,2.41571553768669,10.0939175310781,20.5809224758569,0,0,1.06644125267617,0.232236671860439,1.41754207454303,0,1.11189021922435,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0,0.779856348476481,0,0.648414149624083,0,1.51734320762465,0.685491075658373,1.1270773567308,0.407302655690628,0.775809948670503,0.631222379012867,0.252946148497029,0,0.31399745568275,0.123397163921801,1.1858105083486,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.482354319504834,0,0.287696137450811,1.78348749452539,0.823684239564244,0,1.11642284300551,0.312037673114561,0.757736633841335,1.61457672169721,2.41221760681684,0,1.13694847062291,0.814824882210129,0.678980343100753,0.938760993154008,0.502518772325447,1.19021820443007,1.17080188714679,0.788175720530955,1.10732344824387,1.43509291791738,0.163863314715738,0.345369963731791,0,0,0,0,0,2.72936002979246,3.98519734413491,0.983609672260053,0.252470927204373,2.2085575359138,2.34263246577983,2.36965737506079,1.91175038362042,1.11399337041197,0.566153061577665,1.21443210502468,2.33804686329049,0.790575555893047,4.81981974632711,1.13552068166615,1.95872164033981,1.62886959353576,0.824850614862677,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0,0,0,2.04263763452273,2.16073312837572,2.8458910432206,3.42939256050548,2.83744373827638,2.67553226403106,1.81003922662333,2.43571959291679,0,0,0,0,0.807322133479528,0.120625849856312,0.119372344003136,0,0.291480836629851,3.52308073819968,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,1.89801596148681,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,1.04661582230785,0.330916980914195,0.777804753376191,0.774958940866387,0.675824501963113,0.938857909166032,1.3020438484395,3.25063967719704,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0,4.51801474093653,2.30162618253588,2.29158205375759,2.57779773515531,6.85082519770642,3.7769694869485,4.72515750162264,2.70192721934532,2.71885445390523,3.62432218226274,0.93408612825759,1.99512436700516,2.04880326904961,3.8897074730927,1.88651846365184,1.83843508450014,3.33370091702423,2.26638562962784,1.92551525755089,3.53776096469316,2.5347929989024,2.64076877940507,2.62196220915671,2.68905640100451,2.98664438569189,2.38146845641537,2.31768651889711,3.27945674788299,2.06042950401653,2.79677948255355,1.02860775715625,2.8396128985494,2.14592570952589,2.18019624948493,2.25862512996793,2.876896668317,3.10977553883713,2.36762740294059,3.12349461845482,1.12228454331548,2.96587545310435,4.0386837773981,2.86461730218783,2.32405261778949,3.08650577569826,8.49355964989016,1.63752125911786,1.93383948643468,1.14772999241306,0.661774257358546,0.695603506861264 | |phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.912392380975631,0.734187008646726,0,3.2703773457067,4.61340983742391,3.4997381833371,2.09979632438044,0,0,0,0,3.60163210450326,2.29226751951005,3.6097046459421,9.91350658212029,7.40587370980846,9.50747105259269,1.35537812827653,1.77858959222228,0,0,0,0.599200221036809,1.53687322128622,14.9313041724208,18.4958135514416,17.8776217148675,2.85650984403804,2.87129103237098,14.6988959057945,15.9103481890272,17.4651569455904,2.20231761998777,3.83062014255563,4.14737639791857,9.36392642884376,8.78281378583133,10.939180781692,2.23346399201105,3.37657566019008,1.5279824777681,4.12480019663135,3.41692033917847,9.13357284543973,0.984440513331393,1.51143120213571,0.289864488701678,0.860423876981386,2.03991400112325,0,0,0.448026887097336,0.421333260395256,0.511290967734173,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,0,0,0,1.25602267690966,0,2.3750742250372,2.77576522825817,1.21786191324856,1.38369298353635,0.753613202763113,2.58695155698551,1.50799909595611,0.247194967734374,0.86759614151947,0,1.29413479957927,0.441683036920787,0.969750506270444,0,10.2473278954042,9.00620839297857,0.255457055208591,0,0,0,5.84183493678809,6.8625090422794,34.303638126812,9.56033761057521,6.13717097592793,4.57133698031032,6.81413304884582,0.81471491080253,0.995255764880744,0,2.10441855886474,2.08192708740326,2.75882525320168,3.24111833649629,2.41127708537144,5.03470093719826,5.25266253167884,6.27801554550183,4.13925393182425,0.215567992932842,1.32374256117473,1.58356011747554,1.31517439456545,2.22437799380478,1.39300866608867,1.23469281844766,2.18937693500343,0,0,0,2.48550927042602,5.39409937956521,4.50155153652537,3.55117103377815,5.3126342571799,3.23960937063494,4.65067889500816,3.21928081679543,5.48797109125697,4.60767579757745,3.11918181750281,3.56702762001765,3.36259971078264,3.29325172936576,2.41571553768669,10.0939175310781,20.5809224758569,0,0,1.06644125267617,0.232236671860439,1.41754207454303,0,1.11189021922435,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0,0.779856348476481,0,0.648414149624083,0,1.51734320762465,0.685491075658373,1.1270773567308,0.407302655690628,0.775809948670503,0.631222379012867,0.252946148497029,0,0.31399745568275,0.123397163921801,1.1858105083486,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.482354319504834,0,0.287696137450811,1.78348749452539,0.823684239564244,0,1.11642284300551,0.312037673114561,0.757736633841335,1.61457672169721,2.41221760681684,0,1.13694847062291,0.814824882210129,0.678980343100753,0.938760993154008,0.502518772325447,1.19021820443007,1.17080188714679,0.788175720530955,1.10732344824387,1.43509291791738,0.163863314715738,0.345369963731791,0,0,0,0,0,2.72936002979246,3.98519734413491,0.983609672260053,0.252470927204373,2.2085575359138,2.34263246577983,2.36965737506079,1.91175038362042,1.11399337041197,0.566153061577665,1.21443210502468,2.33804686329049,0.790575555893047,4.81981974632711,1.13552068166615,1.95872164033981,1.62886959353576,0.824850614862677,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0,0,0,2.04263763452273,2.16073312837572,2.8458910432206,3.42939256050548,2.83744373827638,2.67553226403106,1.81003922662333,2.43571959291679,0,0,0,0,0.807322133479528,0.120625849856312,0.119372344003136,0,0.291480836629851,3.52308073819968,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,1.89801596148681,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,1.04661582230785,0.330916980914195,0.777804753376191,0.774958940866387,0.675824501963113,0.938857909166032,1.3020438484395,3.25063967719704,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0,4.51801474093653,2.30162618253588,2.29158205375759,2.57779773515531,6.85082519770642,3.7769694869485,4.72515750162264,2.70192721934532,2.71885445390523,3.62432218226274,0.93408612825759,1.99512436700516,2.04880326904961,3.8897074730927,1.88651846365184,1.83843508450014,3.33370091702423,2.26638562962784,1.92551525755089,3.53776096469316,2.5347929989024,2.64076877940507,2.62196220915671,2.68905640100451,2.98664438569189,2.38146845641537,2.31768651889711,3.27945674788299,2.06042950401653,2.79677948255355,1.02860775715625,2.8396128985494,2.14592570952589,2.18019624948493,2.25862512996793,2.876896668317,3.10977553883713,2.36762740294059,3.12349461845482,1.12228454331548,2.96587545310435,4.0386837773981,2.86461730218783,2.32405261778949,3.08650577569826,8.49355964989016,1.63752125911786,1.93383948643468,1.14772999241306,0.661774257358546,0.695603506861264 | ||
|short_description=p5@Cdh2 | |||
}} | }} |
Latest revision as of 02:01, 27 September 2015
Short description: | p5@Cdh2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdh2_5end |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | -154bp_to_ENSMUST00000152779_5end |
EntrezGene: | Cdh2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.74e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.74e-14 | 23 |
neuron | 1.63e-12 | 33 |
neuronal stem cell | 1.63e-12 | 33 |
neuroblast | 1.63e-12 | 33 |
electrically signaling cell | 1.63e-12 | 33 |
electrically responsive cell | 1.50e-11 | 39 |
electrically active cell | 1.50e-11 | 39 |
neural cell | 2.24e-11 | 43 |
ectodermal cell | 8.64e-11 | 44 |
neurectodermal cell | 8.64e-11 | 44 |