FFCP PHASE1:Mm9::chr7:82454016..82454039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64176 | |EntrezGene=64176 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BG39 | |UniProt=Q8BG39 | ||
|association_with_transcript=108bp_to_ENSMUST00000165175,NM_153579,uc009hwl.1_5end | |association_with_transcript=108bp_to_ENSMUST00000165175,NM_153579,uc009hwl.1_5end | ||
|cluster_id=chr7:82454016..82454039,- | |||
|description=CAGE_peak_3_at_Sv2b_5end | |description=CAGE_peak_3_at_Sv2b_5end | ||
|id=chr7:82454016..82454039,- | |id=chr7:82454016..82454039,- | ||
|ontology_enrichment_celltype=CL:0000540!3.68e-11!33;CL:0000047!3.68e-11!33;CL:0000031!3.68e-11!33;CL:0000404!3.68e-11!33;CL:0000117!7.23e-10!23;CL:0000337!7.23e-10!23;CL:0000221!1.02e-07!44;CL:0000133!1.02e-07!44;CL:0002319!1.74e-07!43;CL:0000393!2.25e-07!39;CL:0000211!2.25e-07!39 | |ontology_enrichment_celltype=CL:0000540!3.68e-11!33;CL:0000047!3.68e-11!33;CL:0000031!3.68e-11!33;CL:0000404!3.68e-11!33;CL:0000117!7.23e-10!23;CL:0000337!7.23e-10!23;CL:0000221!1.02e-07!44;CL:0000133!1.02e-07!44;CL:0002319!1.74e-07!43;CL:0000393!2.25e-07!39;CL:0000211!2.25e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.99e-11,23;CL:0000337,1.99e-11,23;CL:0000540,1.49e-10,33;CL:0000047,1.49e-10,33;CL:0000031,1.49e-10,33;CL:0000404,1.49e-10,33;CL:0000393,1.09e-07,39;CL:0000211,1.09e-07,39;CL:0000221,2.59e-07,44;CL:0000133,2.59e-07,44;CL:0002319,4.93e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.89e-22!102;UBERON:0000924!3.89e-22!102;UBERON:0006601!3.89e-22!102;UBERON:0000033!1.43e-21!63;UBERON:0000073!2.61e-21!75;UBERON:0001016!2.61e-21!75;UBERON:0001017!8.02e-21!73;UBERON:0005743!8.02e-21!73;UBERON:0002346!1.72e-20!71;UBERON:0003075!1.72e-20!71;UBERON:0007284!1.72e-20!71;UBERON:0001049!1.88e-18!52;UBERON:0005068!1.88e-18!52;UBERON:0006241!1.88e-18!52;UBERON:0007135!1.88e-18!52;UBERON:0003056!4.89e-18!49;UBERON:0000955!3.26e-17!50;UBERON:0006238!3.26e-17!50;UBERON:0007811!5.31e-17!86;UBERON:0002616!1.23e-16!49;UBERON:0000153!4.82e-16!94;UBERON:0002020!8.95e-16!34;UBERON:0003080!1.88e-13!40;UBERON:0002780!5.15e-13!39;UBERON:0001890!5.15e-13!39;UBERON:0006240!5.15e-13!39;UBERON:0002791!7.95e-13!29;UBERON:0003528!7.95e-13!29;UBERON:0001893!7.95e-13!29;UBERON:0000956!7.84e-11!21;UBERON:0001869!7.84e-11!21;UBERON:0000203!7.84e-11!21;UBERON:0002619!7.70e-09!17;UBERON:0002021!8.36e-09!10;UBERON:0000411!8.36e-09!10;UBERON:0001950!8.36e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.18e-30,64;UBERON:0003075,6.18e-30,64;UBERON:0007284,6.18e-30,64;UBERON:0010371,8.55e-27,73;UBERON:0000073,2.89e-26,54;UBERON:0004121,4.94e-26,95;UBERON:0000924,4.94e-26,95;UBERON:0006601,4.94e-26,95;UBERON:0001049,1.23e-24,52;UBERON:0005068,1.23e-24,52;UBERON:0006241,1.23e-24,52;UBERON:0007135,1.23e-24,52;UBERON:0003056,3.20e-24,49;UBERON:0001016,5.90e-24,75;UBERON:0001017,6.45e-24,73;UBERON:0002020,1.04e-21,34;UBERON:0000955,1.64e-20,47;UBERON:0006238,1.64e-20,47;UBERON:0002616,9.38e-20,46;UBERON:0003080,5.02e-18,40;UBERON:0003528,1.04e-17,29;UBERON:0002791,1.04e-17,29;UBERON:0001893,1.04e-17,29;UBERON:0002780,1.96e-17,39;UBERON:0001890,1.96e-17,39;UBERON:0006240,1.96e-17,39;UBERON:0010314,2.50e-16,92;UBERON:0000956,1.01e-14,21;UBERON:0001869,1.01e-14,21;UBERON:0000203,1.01e-14,21;UBERON:0002619,4.82e-12,17;UBERON:0002021,2.82e-11,10;UBERON:0000411,2.82e-11,10;UBERON:0001950,2.82e-11,10;UBERON:0003076,3.33e-07,12;UBERON:0003057,3.33e-07,12;UBERON:0000970,3.97e-07,9;UBERON:0000019,3.97e-07,9;UBERON:0000047,3.97e-07,9;UBERON:0010312,3.97e-07,9;UBERON:0004088,3.97e-07,9;UBERON:0002104,3.97e-07,9;UBERON:0001456,3.97e-07,9;UBERON:0003072,3.97e-07,9;UBERON:0004128,3.97e-07,9;UBERON:0003071,3.97e-07,9;UBERON:0000020,9.34e-07,12;UBERON:0001032,9.34e-07,12;UBERON:0004456,9.34e-07,12 | |||
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|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,2.48855069540346,4.05017814995072,2.73422449756797,9.71213346972932,11.2642955885323,4.65465037016825,3.45043695665651,1.83843757322004,8.8092704799511,9.19348834213351,9.36999852863085,1.45074916503213,1.73826522844578,0,8.65467296904281,2.25105044012672,10.2374826010463,7.95497180778903,6.26435395516053,4.65998614563251,0.454357159999104,3.02286240427142,0,0,0,0,0,0,0.983110940922263,0,0,0,1.40843419776681,0,0,0,0,0,0,1.25602267690966,0,0,0.520455980298408,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.441683036920787,0,1.86391761218122,15.8101630386235,30.369772487951,0,0,0,0,2.99581278809645,11.4375150704657,1.50785222535437,47.1063907721069,57.7916933566547,9.14267396062064,17.6842976743856,0.407357455401265,0.124406970610093,0.505445516867349,2.73574412652416,1.17108398666433,2.29902104433473,3.42118046630164,4.06903008156431,9.11689088627793,9.60852902136373,10.3071897015702,20.1788629176432,0,0,0.351902248327898,1.31517439456545,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,46.6843685812362,6.99751364179134,0,0.264450566663544,0,0.928946687441754,0.644337306610467,0.605050573870028,0,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,6.91548950893999,0,0,0.631016438832513,0.390438744296638,1.29254038639679,0.955875191810208,1.11399337041197,1.41538265394416,0.809621403349789,1.16902343164525,1.97643888973262,7.06906896127976,3.69044221541498,1.06839362200353,1.79175655288934,4.45419332025846,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0,1.42695054081656,1.64549020602121,3.65357938937519,0,0,0,0.32977250588296,1.29171541356724,0.180938774784468,0.835606408021955,0.328281799490123,0,12.7943458387252,0.341741761595705,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.949007980743406,2.03319467126849,1.51207477150522,1.46361807210128,0.87345025498471,0.539457385539283,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0.288030006257865,1.26404448251271,3.24360344464263,3.59488350076895,3.37794139742267,1.79026695667481,1.39076948346885,0.721172697119813,0.590758108698309,0.605798699688886,0.304827226619999,0.302478555410522,0.194915761479505,0.384847366561318,0,0.226730383615211,0,0,0,1.9318959403219,5.2551093126331,9.34073283763052,0.428736758158132,0,66.6407174288139,70.8900864221052,70.4661481530458,56.3678438087295,38.364621107156,51.3667850224996,49.9516650171536,44.1314779159736,49.8456649882625,37.7965027578829,0.207574695168353,0.399024873401031,1.70733605754134,1.70174701947806,1.04806581313991,0.551530525350042,1.11123363900808,2.06035057238894,1.92551525755089,2.02157769411038,2.02783439912192,3.9611531691076,1.77918864192777,1.6646539625266,1.55075766180156,0.952587382566147,1.15884325944855,1.35036454324594,1.23625770240992,1.03039244094078,3.08582327146874,0.70990322463735,1.66905332963125,1.74415699958794,1.31753132581463,2.11536519729191,1.09756783723664,1.05227884575137,1.90125759384206,1.12228454331548,1.30498519936592,1.37906275325789,0.409231043169689,2.16911577660352,1.15743966588685,1.74867404556562,0.467863216890817,2.36358159453128,1.53030665655075,0.220591419119515,1.15933917810211 | ||
|short_description=p3@Sv2b | |short_description=p3@Sv2b | ||
}} | }} |
Latest revision as of 02:17, 27 September 2015
Short description: | p3@Sv2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sv2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 108bp_to_ENSMUST00000165175, NM_153579, uc009hwl.1_5end |
EntrezGene: | Sv2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.99e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.99e-11 | 23 |
neuron | 1.49e-10 | 33 |
neuronal stem cell | 1.49e-10 | 33 |
neuroblast | 1.49e-10 | 33 |
electrically signaling cell | 1.49e-10 | 33 |
electrically responsive cell | 1.09e-07 | 39 |
electrically active cell | 1.09e-07 | 39 |
ectodermal cell | 2.59e-07 | 44 |
neurectodermal cell | 2.59e-07 | 44 |
neural cell | 4.93e-07 | 43 |