FFCP PHASE1:Mm9::chr4:62280549..62280564,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50780 | |EntrezGene=50780 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9DC04 | |UniProt=Q9DC04 | ||
|association_with_transcript=0bp_to_ENSMUST00000084521_5end | |association_with_transcript=0bp_to_ENSMUST00000084521_5end | ||
|cluster_id=chr4:62280549..62280564,+ | |||
|description=CAGE_peak_19_at_Rgs3_5end | |description=CAGE_peak_19_at_Rgs3_5end | ||
|id=chr4:62280549..62280564,+ | |id=chr4:62280549..62280564,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.16e-11!23;CL:0000337!2.16e-11!23;CL:0000221!3.35e-09!44;CL:0000133!3.35e-09!44;CL:0002319!1.35e-08!43;CL:0000540!2.84e-07!33;CL:0000047!2.84e-07!33;CL:0000031!2.84e-07!33;CL:0000404!2.84e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.04e-12,23;CL:0000337,7.04e-12,23;CL:0002319,1.53e-11,43;CL:0000221,3.05e-11,44;CL:0000133,3.05e-11,44;CL:0000540,3.09e-10,33;CL:0000047,3.09e-10,33;CL:0000031,3.09e-10,33;CL:0000404,3.09e-10,33;CL:0000393,1.80e-08,39;CL:0000211,1.80e-08,39;CL:0000120,1.90e-07,3;CL:0002610,7.29e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.30e-18!73;UBERON:0005743!4.30e-18!73;UBERON:0000955!6.61e-18!50;UBERON:0006238!6.61e-18!50;UBERON:0000073!3.43e-17!75;UBERON:0001016!3.43e-17!75;UBERON:0002616!6.06e-17!49;UBERON:0000033!9.64e-17!63;UBERON:0001049!4.22e-14!52;UBERON:0005068!4.22e-14!52;UBERON:0006241!4.22e-14!52;UBERON:0007135!4.22e-14!52;UBERON:0004121!3.54e-13!102;UBERON:0000924!3.54e-13!102;UBERON:0006601!3.54e-13!102;UBERON:0002791!1.89e-11!29;UBERON:0003528!1.89e-11!29;UBERON:0001893!1.89e-11!29;UBERON:0003080!3.30e-11!40;UBERON:0002780!2.21e-10!39;UBERON:0001890!2.21e-10!39;UBERON:0006240!2.21e-10!39;UBERON:0002020!5.77e-10!34;UBERON:0002346!7.80e-10!71;UBERON:0003075!7.80e-10!71;UBERON:0007284!7.80e-10!71;UBERON:0000153!2.38e-09!94;UBERON:0004111!2.52e-09!122;UBERON:0003056!4.74e-09!49;UBERON:0000025!6.97e-09!114;UBERON:0007811!9.30e-09!86;UBERON:0000956!6.15e-07!21;UBERON:0001869!6.15e-07!21;UBERON:0000203!6.15e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-18,73;UBERON:0001016,5.78e-18,75;UBERON:0004121,1.21e-13,95;UBERON:0000924,1.21e-13,95;UBERON:0006601,1.21e-13,95;UBERON:0000073,1.27e-12,54;UBERON:0000955,1.29e-10,47;UBERON:0006238,1.29e-10,47;UBERON:0001896,2.75e-10,2;UBERON:0002298,2.75e-10,2;UBERON:0005290,2.75e-10,2;UBERON:0010096,2.75e-10,2;UBERON:0001049,2.61e-09,52;UBERON:0005068,2.61e-09,52;UBERON:0006241,2.61e-09,52;UBERON:0007135,2.61e-09,52;UBERON:0002616,7.45e-09,46;UBERON:0004733,8.85e-08,6;UBERON:0004732,8.85e-08,6;UBERON:0002028,8.85e-08,6;UBERON:0007277,8.85e-08,6;UBERON:0010371,1.71e-07,73;UBERON:0002346,3.03e-07,64;UBERON:0003075,3.03e-07,64;UBERON:0007284,3.03e-07,64;UBERON:0004684,7.29e-07,3;UBERON:0002275,7.29e-07,3 | |||
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.28495594245697,0.878744730937887,0,0.55994568650145,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,0.207379224616955,0.270011876663381,0.420649922702764,0,0,0.734944795289724,0.191690942036473,1.83843757322004,1.10115880999389,0.383062014255563,1.22885226604995,0.395658863190582,0.640413505216868,1.04182674111352,0,0.56276261003168,1.37518422999129,0,0,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0.441683036920787,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.54644086988199,0.915001205637253,0.502617408451458,1.39059456153821,0.511430914660661,1.87009240103604,0.486723789203273,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.56748166682099,0.292399974850665,0,0.134206418760372,0.630869845692382,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,0,0.433947175744535,0,0,0,0,1.60550589987792,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0,0,0.906284817968409,1.55328093525546,0,0.798049746802062,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0,0 | |phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.28495594245697,0.878744730937887,0,0.55994568650145,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,0.207379224616955,0.270011876663381,0.420649922702764,0,0,0.734944795289724,0.191690942036473,1.83843757322004,1.10115880999389,0.383062014255563,1.22885226604995,0.395658863190582,0.640413505216868,1.04182674111352,0,0.56276261003168,1.37518422999129,0,0,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0.441683036920787,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.54644086988199,0.915001205637253,0.502617408451458,1.39059456153821,0.511430914660661,1.87009240103604,0.486723789203273,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.56748166682099,0.292399974850665,0,0.134206418760372,0.630869845692382,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,0,0.433947175744535,0,0,0,0,1.60550589987792,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0,0,0.906284817968409,1.55328093525546,0,0.798049746802062,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0,0 | ||
|short_description=p19@Rgs3 | |short_description=p19@Rgs3 | ||
}} | }} |
Latest revision as of 04:04, 27 September 2015
Short description: | p19@Rgs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Rgs3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000084521_5end |
EntrezGene: | Rgs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.04e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.04e-12 | 23 |
neural cell | 1.53e-11 | 43 |
ectodermal cell | 3.05e-11 | 44 |
neurectodermal cell | 3.05e-11 | 44 |
neuron | 3.09e-10 | 33 |
neuronal stem cell | 3.09e-10 | 33 |
neuroblast | 3.09e-10 | 33 |
electrically signaling cell | 3.09e-10 | 33 |
electrically responsive cell | 1.80e-08 | 39 |
electrically active cell | 1.80e-08 | 39 |
granule cell | 1.90e-07 | 3 |
raphe nuclei neuron | 7.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.59e-18 | 73 |
nervous system | 5.78e-18 | 75 |
ectoderm-derived structure | 1.21e-13 | 95 |
ectoderm | 1.21e-13 | 95 |
presumptive ectoderm | 1.21e-13 | 95 |
regional part of nervous system | 1.27e-12 | 54 |
brain | 1.29e-10 | 47 |
future brain | 1.29e-10 | 47 |
medulla oblongata | 2.75e-10 | 2 |
brainstem | 2.75e-10 | 2 |
myelencephalon | 2.75e-10 | 2 |
future myelencephalon | 2.75e-10 | 2 |
neural tube | 2.61e-09 | 52 |
neural rod | 2.61e-09 | 52 |
future spinal cord | 2.61e-09 | 52 |
neural keel | 2.61e-09 | 52 |
regional part of brain | 7.45e-09 | 46 |
segmental subdivision of hindbrain | 8.85e-08 | 6 |
segmental subdivision of nervous system | 8.85e-08 | 6 |
hindbrain | 8.85e-08 | 6 |
presumptive hindbrain | 8.85e-08 | 6 |
ecto-epithelium | 1.71e-07 | 73 |
neurectoderm | 3.03e-07 | 64 |
neural plate | 3.03e-07 | 64 |
presumptive neural plate | 3.03e-07 | 64 |
raphe nuclei | 7.29e-07 | 3 |
reticular formation | 7.29e-07 | 3 |