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FFCP PHASE1:Mm9::chr4:62280716..62280753,+: Difference between revisions

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{{FFCP|EntrezGene=50780|HGNC=|MCL_coexpression_id=94|UniProt=Q9DC04|association_with_transcript=10bp_to_NM_001081650,NM_134257,uc008tfe.1,uc012dfu.1_5end|description=CAGE_peak_3_at_Rgs3_5end|id=chr4:62280716..62280753,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!4.84e-10!85;UBERON:0002048!1.59e-09!14;UBERON:0000117!1.59e-09!14;UBERON:0000171!1.59e-09!14;UBERON:0000170!1.59e-09!14;UBERON:0005597!1.59e-09!14;UBERON:0000118!1.59e-09!14;UBERON:0009569!4.75e-09!66;UBERON:0000468!8.23e-09!333;UBERON:0005153!1.05e-08!17;UBERON:0003103!1.05e-07!43;UBERON:0007100!1.26e-07!18;UBERON:0000948!1.26e-07!18;UBERON:0005498!1.26e-07!18;UBERON:0004140!1.26e-07!18;UBERON:0009881!1.26e-07!18;UBERON:0004141!1.26e-07!18;UBERON:0003084!1.26e-07!18;UBERON:0007005!1.26e-07!18;UBERON:0004139!1.26e-07!18;UBERON:0004291!1.26e-07!18;UBERON:0005157!2.19e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.21e-10,79;UBERON:0002048,5.62e-10,14;UBERON:0000117,5.62e-10,14;UBERON:0000171,5.62e-10,14;UBERON:0000170,5.62e-10,14;UBERON:0005597,5.62e-10,14;UBERON:0000118,5.62e-10,14;UBERON:0005153,1.03e-08,17;UBERON:0009569,1.03e-08,66;UBERON:0007100,1.37e-07,18;UBERON:0000948,1.37e-07,18;UBERON:0005498,1.37e-07,18;UBERON:0004140,1.37e-07,18;UBERON:0009881,1.37e-07,18;UBERON:0004141,1.37e-07,18;UBERON:0003084,1.37e-07,18;UBERON:0007005,1.37e-07,18;UBERON:0004139,1.37e-07,18;UBERON:0004291,1.37e-07,18;UBERON:0003103,1.41e-07,43;UBERON:0005178,9.62e-07,17;UBERON:0005181,9.62e-07,17;UBERON:0002224,9.62e-07,17;UBERON:0000915,9.62e-07,17;UBERON:0008947,9.62e-07,17;UBERON:0003258,9.62e-07,17|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0.607425802169478,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0.85960031981627,0,1.21389876515759,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,1.21505344498522,0.420649922702764,0.856952953211411,1.76694832761291,0.734944795289724,1.53352753629178,0.919218786610021,2.20231761998777,2.17068474744819,0.921639199537461,0.923204014111357,0.548925861614458,2.08365348222704,1.95428099300967,2.25105044012672,1.06958773443767,1.47314292736834,1.28134512719193,0.745597783301202,0.681535739998656,0.226714680320357,36.2330610877097,2.58127163094416,0,0,0.649776417447669,0.448026887097336,1.96622188184453,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,6.47344709117929,4.89859058913922,3.99016251562112,2.13125834818499,2.30615497256059,2.26083960828934,3.76283862834255,3.51866455723091,2.47194967734374,9.39895819979426,0,2.58826959915855,2.42925670306433,1.93950101254089,1.86391761218122,1.46390398505774,1.8850203613211,0.255457055208591,0,0.599902730993408,0,1.04853447583376,1.37250180845588,1.13088916901578,1.21677024134594,0.767146371990992,1.24672826735736,1.94689515681309,2.44414473240759,2.98576729464223,0.505445516867349,1.68353484709179,0.910843100738926,0.919608417733892,1.44049703844279,1.65775299619287,2.9255694635071,1.5373646434182,1.68663104207512,0.776110112217047,0.646703978798527,2.08016688184601,2.11141348996739,1.7535658594206,2.50242524303038,4.87553033131033,2.26360350048738,1.99034266818493,0,0,0.284163499395593,9.94203708170409,8.44293815931946,10.4435995647389,11.3637473080901,12.199382368339,7.55908853148153,6.0458825635106,6.9751084363901,10.2753501283109,7.07607354627966,10.8350526292203,14.592385718254,8.18719929581861,8.56245449635098,11.0049263383505,1.68231958851302,1.3377599609307,0,0.528901133327089,2.13288250535234,0.696710015581316,1.67527699718721,1.4117846723634,2.2237804384487,1.33157938278791,1.42358718463353,1.81168850196412,2.01068167040216,2.98434708061726,0.779856348476481,1.79763881730844,1.51296634912286,1.7922714592893,2.0863469104839,3.54170389090159,9.01661885384643,3.86937522906097,3.68509725618489,5.96154469067708,6.57659986092276,5.16635517928608,3.45397201251025,3.94870924549762,1.48226313543574,0.500535317148282,0.982794975566015,1.57403478669398,1.21716072833102,1.4470629585145,0.50925170356284,2.01387296215567,2.91843408195064,3.0201755450689,2.87536413054709,3.34926852901653,4.36852742360385,2.77836765741823,2.69096120282868,2.41221760681684,9.05290631816363,3.60033682363921,4.23708938749267,4.58311731593008,6.10194645550105,8.5428191295326,7.85544014923845,12.4885534628991,11.1920952315396,12.4020226203314,18.018388858296,15.7308782127108,10.8791538575514,19.6722719670856,0,0,1.47529281905711,4.13905119457099,1.60550589987792,2.22702204525186,0,6.05930225290495,0,0,0,0,0,0,0.404810701674894,0,0,1.28528526568723,3.97432238583152,3.20518086601059,3.25773918707152,4.78413356620353,3.98235415019888,1.94224508923985,0.604647113929502,2.07465587731488,3.2483208216885,3.68922177532713,6.20227903603731,2.54473610634254,2.49548164869305,1.58018378967908,2.10837217149998,1.0313554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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=50780
|HGNC=
|MCL_coexpression_id=94
|TSSclassifier=NA
|UniProt=Q9DC04
|association_with_transcript=10bp_to_NM_001081650,NM_134257,uc008tfe.1,uc012dfu.1_5end
|cluster_id=chr4:62280716..62280753,+
|description=CAGE_peak_3_at_Rgs3_5end
|id=chr4:62280716..62280753,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!4.84e-10!85;UBERON:0002048!1.59e-09!14;UBERON:0000117!1.59e-09!14;UBERON:0000171!1.59e-09!14;UBERON:0000170!1.59e-09!14;UBERON:0005597!1.59e-09!14;UBERON:0000118!1.59e-09!14;UBERON:0009569!4.75e-09!66;UBERON:0000468!8.23e-09!333;UBERON:0005153!1.05e-08!17;UBERON:0003103!1.05e-07!43;UBERON:0007100!1.26e-07!18;UBERON:0000948!1.26e-07!18;UBERON:0005498!1.26e-07!18;UBERON:0004140!1.26e-07!18;UBERON:0009881!1.26e-07!18;UBERON:0004141!1.26e-07!18;UBERON:0003084!1.26e-07!18;UBERON:0007005!1.26e-07!18;UBERON:0004139!1.26e-07!18;UBERON:0004291!1.26e-07!18;UBERON:0005157!2.19e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.21e-10,79;UBERON:0002048,5.62e-10,14;UBERON:0000117,5.62e-10,14;UBERON:0000171,5.62e-10,14;UBERON:0000170,5.62e-10,14;UBERON:0005597,5.62e-10,14;UBERON:0000118,5.62e-10,14;UBERON:0005153,1.03e-08,17;UBERON:0009569,1.03e-08,66;UBERON:0007100,1.37e-07,18;UBERON:0000948,1.37e-07,18;UBERON:0005498,1.37e-07,18;UBERON:0004140,1.37e-07,18;UBERON:0009881,1.37e-07,18;UBERON:0004141,1.37e-07,18;UBERON:0003084,1.37e-07,18;UBERON:0007005,1.37e-07,18;UBERON:0004139,1.37e-07,18;UBERON:0004291,1.37e-07,18;UBERON:0003103,1.41e-07,43;UBERON:0005178,9.62e-07,17;UBERON:0005181,9.62e-07,17;UBERON:0002224,9.62e-07,17;UBERON:0000915,9.62e-07,17;UBERON:0008947,9.62e-07,17;UBERON:0003258,9.62e-07,17
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0.607425802169478,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0.85960031981627,0,1.21389876515759,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,1.21505344498522,0.420649922702764,0.856952953211411,1.76694832761291,0.734944795289724,1.53352753629178,0.919218786610021,2.20231761998777,2.17068474744819,0.921639199537461,0.923204014111357,0.548925861614458,2.08365348222704,1.95428099300967,2.25105044012672,1.06958773443767,1.47314292736834,1.28134512719193,0.745597783301202,0.681535739998656,0.226714680320357,36.2330610877097,2.58127163094416,0,0,0.649776417447669,0.448026887097336,1.96622188184453,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,6.47344709117929,4.89859058913922,3.99016251562112,2.13125834818499,2.30615497256059,2.26083960828934,3.76283862834255,3.51866455723091,2.47194967734374,9.39895819979426,0,2.58826959915855,2.42925670306433,1.93950101254089,1.86391761218122,1.46390398505774,1.8850203613211,0.255457055208591,0,0.599902730993408,0,1.04853447583376,1.37250180845588,1.13088916901578,1.21677024134594,0.767146371990992,1.24672826735736,1.94689515681309,2.44414473240759,2.98576729464223,0.505445516867349,1.68353484709179,0.910843100738926,0.919608417733892,1.44049703844279,1.65775299619287,2.9255694635071,1.5373646434182,1.68663104207512,0.776110112217047,0.646703978798527,2.08016688184601,2.11141348996739,1.7535658594206,2.50242524303038,4.87553033131033,2.26360350048738,1.99034266818493,0,0,0.284163499395593,9.94203708170409,8.44293815931946,10.4435995647389,11.3637473080901,12.199382368339,7.55908853148153,6.0458825635106,6.9751084363901,10.2753501283109,7.07607354627966,10.8350526292203,14.592385718254,8.18719929581861,8.56245449635098,11.0049263383505,1.68231958851302,1.3377599609307,0,0.528901133327089,2.13288250535234,0.696710015581316,1.67527699718721,1.4117846723634,2.2237804384487,1.33157938278791,1.42358718463353,1.81168850196412,2.01068167040216,2.98434708061726,0.779856348476481,1.79763881730844,1.51296634912286,1.7922714592893,2.0863469104839,3.54170389090159,9.01661885384643,3.86937522906097,3.68509725618489,5.96154469067708,6.57659986092276,5.16635517928608,3.45397201251025,3.94870924549762,1.48226313543574,0.500535317148282,0.982794975566015,1.57403478669398,1.21716072833102,1.4470629585145,0.50925170356284,2.01387296215567,2.91843408195064,3.0201755450689,2.87536413054709,3.34926852901653,4.36852742360385,2.77836765741823,2.69096120282868,2.41221760681684,9.05290631816363,3.60033682363921,4.23708938749267,4.58311731593008,6.10194645550105,8.5428191295326,7.85544014923845,12.4885534628991,11.1920952315396,12.4020226203314,18.018388858296,15.7308782127108,10.8791538575514,19.6722719670856,0,0,1.47529281905711,4.13905119457099,1.60550589987792,2.22702204525186,0,6.05930225290495,0,0,0,0,0,0,0.404810701674894,0,0,1.28528526568723,3.97432238583152,3.20518086601059,3.25773918707152,4.78413356620353,3.98235415019888,1.94224508923985,0.604647113929502,2.07465587731488,3.2483208216885,3.68922177532713,6.20227903603731,2.54473610634254,2.49548164869305,1.58018378967908,2.10837217149998,1.03135543248187,3.74483566329167,1.8006109403131,2.97524972700335,2.35770738534752,2.30542303734956,3.92411398724555,2.79733335023606,3.95804433848979,0.704015124191131,1.69465656691056,0.882113592219848,1.48397627647332,4.03661066739764,2.41251699712623,1.90995750405018,1.47726809770555,1.7488850197791,2.22510362412612,1.70870880797853,3.714963623338,0.925972636848558,1.50694765603753,1.36694227721025,0.686334519619568,1.01987057996313,1.11961161858926,0.552799895217695,0,1.89801596148681,1.82987520414164,1.51207477150522,1.88179466413022,1.31017538247707,1.88810084938749,3.05817786183743,2.87931536182433,1.94422459937689,0,0,2.69129782879162,0.827292452285488,1.75006069509643,1.80823752868824,2.87225413334323,2.8165737274981,1.5624526181274,0.943734099831398,0.966336483304024,2.30424005006292,0,0.405450430580328,0.616265742988964,0.389762468933385,0.895133478337407,1.19208812868759,0.240390899039938,0.738447635872886,1.21159739937777,0.685861259894999,0.302478555410522,0.194915761479505,0.288635524920988,0.584384510907845,3.62768613784338,0,0,0,2.70465431645067,1.87682475451182,2.56412273974171,1.71494703263253,1.50471631210609,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0,0.755393897389701,0,0,0.453142408984205,0,0.415149390336707,1.59609949360412,2.56100408631201,2.43106717068294,0.838452650511929,1.65459157605013,2.22246727801615,3.29656091582231,1.92551525755089,1.51618327058278,2.78827229879264,4.14977951049368,4.58843386602424,4.09760975391163,4.36509564062661,2.85776214769844,2.43357084484197,1.73618298417335,2.47251540481984,3.23837624295674,2.40008476669791,3.90446773550542,4.76872379894642,2.61623549938191,3.10560955370591,3.04612588410035,2.92684756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|short_description=p3@Rgs3
}}

Latest revision as of 04:05, 27 September 2015

Short description:p3@Rgs3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rgs3_5end
Coexpression cluster:MCL_coexpression_mm9:94
Association with transcript: 10bp_to_NM_001081650, NM_134257, uc008tfe.1, uc012dfu.1_5end
EntrezGene:Rgs3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rgs3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G336.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E99.94
heart, embryo E12.CNhs11015.353-12F58.44
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C812.20
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E310.28
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G110.84
heart, neonate N16.CNhs11209.782-15G114.59
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D56.58
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E618.02
lung, neonate N20.CNhs11109.822-18A415.73
lung, neonate N25.CNhs11119.1359-25C710.88
lung, neonate N30.CNhs11133.1394-42H219.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B45.80





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element3.21e-1079
lung5.62e-1014
respiratory tube5.62e-1014
respiration organ5.62e-1014
pair of lungs5.62e-1014
lung primordium5.62e-1014
lung bud5.62e-1014
epithelial bud1.03e-0817
subdivision of trunk1.03e-0866
primary circulatory organ1.37e-0718
heart1.37e-0718
primitive heart tube1.37e-0718
primary heart field1.37e-0718
anterior lateral plate mesoderm1.37e-0718
heart tube1.37e-0718
heart primordium1.37e-0718
cardiac mesoderm1.37e-0718
cardiogenic plate1.37e-0718
heart rudiment1.37e-0718
compound organ1.41e-0743
thoracic cavity element9.62e-0717
thoracic segment organ9.62e-0717
thoracic cavity9.62e-0717
thoracic segment of trunk9.62e-0717
respiratory primordium9.62e-0717
endoderm of foregut9.62e-0717
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