FFCP PHASE1:Mm9::chr4:66065468..66065490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56079 | |EntrezGene=56079 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |MCL_coexpression_id=281 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BRX1 | |UniProt=Q8BRX1 | ||
|association_with_transcript=9bp_to_ENSMUST00000030064_5end | |association_with_transcript=9bp_to_ENSMUST00000030064_5end | ||
|cluster_id=chr4:66065468..66065490,- | |||
|description=CAGE_peak_2_at_Astn2_5end | |description=CAGE_peak_2_at_Astn2_5end | ||
|id=chr4:66065468..66065490,- | |id=chr4:66065468..66065490,- | ||
|ontology_enrichment_celltype=CL:0000221!1.80e-14!44;CL:0000133!1.80e-14!44;CL:0002319!4.65e-14!43;CL:0000540!2.07e-12!33;CL:0000047!2.07e-12!33;CL:0000031!2.07e-12!33;CL:0000404!2.07e-12!33;CL:0000055!9.07e-11!50;CL:0000393!1.27e-09!39;CL:0000211!1.27e-09!39;CL:0000107!1.58e-07!9;CL:0000117!9.41e-07!23;CL:0000337!9.41e-07!23 | |ontology_enrichment_celltype=CL:0000221!1.80e-14!44;CL:0000133!1.80e-14!44;CL:0002319!4.65e-14!43;CL:0000540!2.07e-12!33;CL:0000047!2.07e-12!33;CL:0000031!2.07e-12!33;CL:0000404!2.07e-12!33;CL:0000055!9.07e-11!50;CL:0000393!1.27e-09!39;CL:0000211!1.27e-09!39;CL:0000107!1.58e-07!9;CL:0000117!9.41e-07!23;CL:0000337!9.41e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.69e-15,44;CL:0000133,2.69e-15,44;CL:0002319,8.41e-15,43;CL:0000540,9.74e-14,33;CL:0000047,9.74e-14,33;CL:0000031,9.74e-14,33;CL:0000404,9.74e-14,33;CL:0000393,2.11e-10,39;CL:0000211,2.11e-10,39;CL:0000107,5.55e-09,9;CL:0000117,5.85e-07,23;CL:0000337,5.85e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.32e-32,75;UBERON:0001017,6.01e-31,73;UBERON:0004121,5.84e-29,95;UBERON:0000924,5.84e-29,95;UBERON:0006601,5.84e-29,95;UBERON:0002346,7.29e-22,64;UBERON:0003075,7.29e-22,64;UBERON:0007284,7.29e-22,64;UBERON:0000073,1.43e-18,54;UBERON:0010371,2.61e-18,73;UBERON:0001049,4.29e-17,52;UBERON:0005068,4.29e-17,52;UBERON:0006241,4.29e-17,52;UBERON:0007135,4.29e-17,52;UBERON:0000955,2.73e-14,47;UBERON:0006238,2.73e-14,47;UBERON:0003056,1.15e-13,49;UBERON:0002616,1.33e-13,46;UBERON:0002020,6.02e-13,34;UBERON:0010314,1.21e-12,92;UBERON:0003080,1.74e-11,40;UBERON:0002780,6.75e-11,39;UBERON:0001890,6.75e-11,39;UBERON:0006240,6.75e-11,39;UBERON:0003528,5.65e-10,29;UBERON:0002791,5.65e-10,29;UBERON:0001893,5.65e-10,29;UBERON:0000010,2.56e-09,11;UBERON:0002021,3.81e-09,10;UBERON:0000411,3.81e-09,10;UBERON:0001950,3.81e-09,10;UBERON:0002410,5.55e-09,9;UBERON:0002619,3.04e-07,17 | |||
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| ||
|short_description=p2@Astn2 | |short_description=p2@Astn2 | ||
}} | }} |
Latest revision as of 04:52, 27 September 2015
Short description: | p2@Astn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Astn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 9bp_to_ENSMUST00000030064_5end |
EntrezGene: | Astn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.69e-15 | 44 |
neurectodermal cell | 2.69e-15 | 44 |
neural cell | 8.41e-15 | 43 |
neuron | 9.74e-14 | 33 |
neuronal stem cell | 9.74e-14 | 33 |
neuroblast | 9.74e-14 | 33 |
electrically signaling cell | 9.74e-14 | 33 |
electrically responsive cell | 2.11e-10 | 39 |
electrically active cell | 2.11e-10 | 39 |
autonomic neuron | 5.55e-09 | 9 |
CNS neuron (sensu Vertebrata) | 5.85e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.85e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.32e-32 | 75 |
central nervous system | 6.01e-31 | 73 |
ectoderm-derived structure | 5.84e-29 | 95 |
ectoderm | 5.84e-29 | 95 |
presumptive ectoderm | 5.84e-29 | 95 |
neurectoderm | 7.29e-22 | 64 |
neural plate | 7.29e-22 | 64 |
presumptive neural plate | 7.29e-22 | 64 |
regional part of nervous system | 1.43e-18 | 54 |
ecto-epithelium | 2.61e-18 | 73 |
neural tube | 4.29e-17 | 52 |
neural rod | 4.29e-17 | 52 |
future spinal cord | 4.29e-17 | 52 |
neural keel | 4.29e-17 | 52 |
brain | 2.73e-14 | 47 |
future brain | 2.73e-14 | 47 |
pre-chordal neural plate | 1.15e-13 | 49 |
regional part of brain | 1.33e-13 | 46 |
gray matter | 6.02e-13 | 34 |
structure with developmental contribution from neural crest | 1.21e-12 | 92 |
anterior neural tube | 1.74e-11 | 40 |
regional part of forebrain | 6.75e-11 | 39 |
forebrain | 6.75e-11 | 39 |
future forebrain | 6.75e-11 | 39 |
brain grey matter | 5.65e-10 | 29 |
regional part of telencephalon | 5.65e-10 | 29 |
telencephalon | 5.65e-10 | 29 |
peripheral nervous system | 2.56e-09 | 11 |
occipital lobe | 3.81e-09 | 10 |
visual cortex | 3.81e-09 | 10 |
neocortex | 3.81e-09 | 10 |
autonomic nervous system | 5.55e-09 | 9 |
regional part of cerebral cortex | 3.04e-07 | 17 |