FFCP PHASE1:Mm9::chr18:37844883..37844943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93712 | |EntrezGene=93712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3139 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XY4 | |UniProt=Q91XY4 | ||
|association_with_transcript=-110bp_to_NM_033587,uc008eqp.1_5end | |association_with_transcript=-110bp_to_NM_033587,uc008eqp.1_5end | ||
|cluster_id=chr18:37844883..37844943,+ | |||
|description=CAGE_peak_1_at_Pcdhga4_5end | |description=CAGE_peak_1_at_Pcdhga4_5end | ||
|id=chr18:37844883..37844943,+ | |id=chr18:37844883..37844943,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.94e-10!23;CL:0000337!5.94e-10!23;CL:0000055!1.68e-09!50;CL:0000221!2.32e-08!44;CL:0000133!2.32e-08!44;CL:0002319!2.98e-08!43;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0000540!9.66e-07!33;CL:0000047!9.66e-07!33;CL:0000031!9.66e-07!33;CL:0000404!9.66e-07!33 | |ontology_enrichment_celltype=CL:0000117!5.94e-10!23;CL:0000337!5.94e-10!23;CL:0000055!1.68e-09!50;CL:0000221!2.32e-08!44;CL:0000133!2.32e-08!44;CL:0002319!2.98e-08!43;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0000540!9.66e-07!33;CL:0000047!9.66e-07!33;CL:0000031!9.66e-07!33;CL:0000404!9.66e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-10,23;CL:0000337,1.67e-10,23;CL:0000221,1.41e-08,44;CL:0000133,1.41e-08,44;CL:0002319,1.84e-08,43;CL:0000393,3.11e-08,39;CL:0000211,3.11e-08,39;CL:0000540,6.67e-07,33;CL:0000047,6.67e-07,33;CL:0000031,6.67e-07,33;CL:0000404,6.67e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.35e-27!63;UBERON:0002346!1.94e-26!71;UBERON:0003075!1.94e-26!71;UBERON:0007284!1.94e-26!71;UBERON:0001049!1.84e-25!52;UBERON:0005068!1.84e-25!52;UBERON:0006241!1.84e-25!52;UBERON:0007135!1.84e-25!52;UBERON:0004121!1.91e-24!102;UBERON:0000924!1.91e-24!102;UBERON:0006601!1.91e-24!102;UBERON:0001017!5.10e-24!73;UBERON:0005743!5.10e-24!73;UBERON:0000073!1.26e-23!75;UBERON:0001016!1.26e-23!75;UBERON:0000955!8.86e-23!50;UBERON:0006238!8.86e-23!50;UBERON:0003056!1.40e-22!49;UBERON:0002616!3.94e-22!49;UBERON:0003080!3.07e-19!40;UBERON:0002780!1.58e-18!39;UBERON:0001890!1.58e-18!39;UBERON:0006240!1.58e-18!39;UBERON:0002020!3.25e-17!34;UBERON:0002791!5.71e-15!29;UBERON:0003528!5.71e-15!29;UBERON:0001893!5.71e-15!29;UBERON:0004111!1.57e-13!122;UBERON:0000153!4.16e-13!94;UBERON:0000025!1.30e-12!114;UBERON:0007811!1.93e-11!86;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0002619!4.42e-09!17;UBERON:0000468!8.21e-07!333;UBERON:0003076!8.85e-07!12;UBERON:0003057!8.85e-07!12 | |ontology_enrichment_uberon=UBERON:0000033!7.35e-27!63;UBERON:0002346!1.94e-26!71;UBERON:0003075!1.94e-26!71;UBERON:0007284!1.94e-26!71;UBERON:0001049!1.84e-25!52;UBERON:0005068!1.84e-25!52;UBERON:0006241!1.84e-25!52;UBERON:0007135!1.84e-25!52;UBERON:0004121!1.91e-24!102;UBERON:0000924!1.91e-24!102;UBERON:0006601!1.91e-24!102;UBERON:0001017!5.10e-24!73;UBERON:0005743!5.10e-24!73;UBERON:0000073!1.26e-23!75;UBERON:0001016!1.26e-23!75;UBERON:0000955!8.86e-23!50;UBERON:0006238!8.86e-23!50;UBERON:0003056!1.40e-22!49;UBERON:0002616!3.94e-22!49;UBERON:0003080!3.07e-19!40;UBERON:0002780!1.58e-18!39;UBERON:0001890!1.58e-18!39;UBERON:0006240!1.58e-18!39;UBERON:0002020!3.25e-17!34;UBERON:0002791!5.71e-15!29;UBERON:0003528!5.71e-15!29;UBERON:0001893!5.71e-15!29;UBERON:0004111!1.57e-13!122;UBERON:0000153!4.16e-13!94;UBERON:0000025!1.30e-12!114;UBERON:0007811!1.93e-11!86;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0002619!4.42e-09!17;UBERON:0000468!8.21e-07!333;UBERON:0003076!8.85e-07!12;UBERON:0003057!8.85e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.76e-29,64;UBERON:0003075,3.76e-29,64;UBERON:0007284,3.76e-29,64;UBERON:0001049,4.93e-27,52;UBERON:0005068,4.93e-27,52;UBERON:0006241,4.93e-27,52;UBERON:0007135,4.93e-27,52;UBERON:0000073,4.01e-26,54;UBERON:0001017,1.82e-25,73;UBERON:0010371,6.55e-25,73;UBERON:0001016,9.56e-25,75;UBERON:0000955,2.31e-24,47;UBERON:0006238,2.31e-24,47;UBERON:0004121,3.72e-24,95;UBERON:0000924,3.72e-24,95;UBERON:0006601,3.72e-24,95;UBERON:0003056,5.83e-24,49;UBERON:0002616,1.14e-23,46;UBERON:0010314,4.87e-23,92;UBERON:0003080,2.13e-20,40;UBERON:0002780,1.22e-19,39;UBERON:0001890,1.22e-19,39;UBERON:0006240,1.22e-19,39;UBERON:0002020,3.06e-18,34;UBERON:0003528,7.56e-16,29;UBERON:0002791,7.56e-16,29;UBERON:0001893,7.56e-16,29;UBERON:0004111,8.80e-14,122;UBERON:0000025,5.42e-13,114;UBERON:0000956,7.37e-12,21;UBERON:0001869,7.37e-12,21;UBERON:0000203,7.37e-12,21;UBERON:0002619,1.42e-09,17;UBERON:0003076,4.01e-07,12;UBERON:0003057,4.01e-07,12 | |||
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| ||
|short_description=p1@Pcdhga4 | |short_description=p1@Pcdhga4 | ||
}} | }} |
Latest revision as of 05:52, 27 September 2015
Short description: | p1@Pcdhga4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhga4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3139 |
Association with transcript: | -110bp_to_NM_033587, uc008eqp.1_5end |
EntrezGene: | Pcdhga4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.67e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-10 | 23 |
ectodermal cell | 1.41e-08 | 44 |
neurectodermal cell | 1.41e-08 | 44 |
neural cell | 1.84e-08 | 43 |
electrically responsive cell | 3.11e-08 | 39 |
electrically active cell | 3.11e-08 | 39 |
neuron | 6.67e-07 | 33 |
neuronal stem cell | 6.67e-07 | 33 |
neuroblast | 6.67e-07 | 33 |
electrically signaling cell | 6.67e-07 | 33 |