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FFCP PHASE1:Mm9::chr11:29593033..29593047,+: Difference between revisions

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(Created page with "{{FFCP |id=chr11:29593033..29593047,+ |short_description=p3@Rtn4 |description=CAGE_peak_3_at_Rtn4_5end |association_with_transcript=86bp_to_ENSMUST00000078830,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr11:29593033..29593047,+
|DHSsupport=NA
|short_description=p3@Rtn4
|DPIdataset=NA
|description=CAGE_peak_3_at_Rtn4_5end
|association_with_transcript=86bp_to_ENSMUST00000078830,ENSMUST00000102842,ENSMUST00000102843_5end
|EntrezGene=68585
|EntrezGene=68585
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BH78,Q8BHF5,Q99P72
|UniProt=Q8BH78,Q8BHF5,Q99P72
|association_with_transcript=86bp_to_ENSMUST00000078830,ENSMUST00000102842,ENSMUST00000102843_5end
|cluster_id=chr11:29593033..29593047,+
|description=CAGE_peak_3_at_Rtn4_5end
|id=chr11:29593033..29593047,+
|ontology_enrichment_celltype=CL:0000055!5.29e-19!50;CL:0002319!2.61e-16!43;CL:0000221!2.93e-16!44;CL:0000133!2.93e-16!44;CL:0002321!5.86e-15!70;CL:0000220!5.86e-15!70;CL:0000393!9.88e-15!39;CL:0000211!9.88e-15!39;CL:0000540!2.63e-11!33;CL:0000047!2.63e-11!33;CL:0000031!2.63e-11!33;CL:0000404!2.63e-11!33;CL:0000144!3.34e-10!121;CL:0000012!3.34e-10!121;CL:0002371!4.43e-10!118;CL:0000548!5.44e-10!115;CL:0000004!5.44e-10!115;CL:0000255!5.44e-10!115;CL:0000117!9.49e-08!23;CL:0000337!9.49e-08!23;CL:0000034!9.79e-07!97
|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-16,43;CL:0000221,1.99e-16,44;CL:0000133,1.99e-16,44;CL:0002321,1.79e-15,70;CL:0000393,6.99e-15,39;CL:0000211,6.99e-15,39;CL:0000540,2.03e-11,33;CL:0000047,2.03e-11,33;CL:0000031,2.03e-11,33;CL:0000404,2.03e-11,33;CL:0000117,8.06e-08,23;CL:0000337,8.06e-08,23;CL:0000034,2.09e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.58e-21,75;UBERON:0004121,5.19e-21,95;UBERON:0000924,5.19e-21,95;UBERON:0006601,5.19e-21,95;UBERON:0001017,8.00e-20,73;UBERON:0002020,2.00e-12,34;UBERON:0000073,6.91e-12,54;UBERON:0010371,1.64e-11,73;UBERON:0001049,4.34e-11,52;UBERON:0005068,4.34e-11,52;UBERON:0006241,4.34e-11,52;UBERON:0007135,4.34e-11,52;UBERON:0003528,4.86e-11,29;UBERON:0002791,4.86e-11,29;UBERON:0001893,4.86e-11,29;UBERON:0002346,9.60e-11,64;UBERON:0003075,9.60e-11,64;UBERON:0007284,9.60e-11,64;UBERON:0000955,1.10e-09,47;UBERON:0006238,1.10e-09,47;UBERON:0010314,1.77e-09,92;UBERON:0002616,3.52e-09,46;UBERON:0000956,1.81e-08,21;UBERON:0001869,1.81e-08,21;UBERON:0000203,1.81e-08,21;UBERON:0003080,5.90e-08,40;UBERON:0002780,6.53e-08,39;UBERON:0001890,6.53e-08,39;UBERON:0006240,6.53e-08,39;UBERON:0002619,4.19e-07,17;UBERON:0003056,5.49e-07,49
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3868419,1.34564891439581,1.32366792365678,2.13896307178452,2.32487682259916,2.02747350588934,2.46450201156083,1.0416350787516,0.629156066554265,0,0,0.948033361884535,0.608175645870493,0.616265742988964,0.909445760844565,0.716106782669926,0.79472541912506,0.480781798079875,1.03382669022204,1.61546319917036,0.304827226619999,0.504130925684203,0.584747284438515,0.769694733122636,0.584384510907845,11.5632495643758,5.32766288097755,9.06109951755704,10.2409615982088,5.79568782096571,12.1993609043268,4.94509385521616,15.4345232936927,1.00314420807073,9.60078132449013,12.889106622201,11.4579102687879,8.07709957015332,11.6464028361009,8.3093328712867,11.4753825039407,7.20513925158753,7.25027854374727,6.21312374102184,2.17953429926771,1.19707462020309,3.24393850932855,2.43106717068294,2.51535795153579,4.04455718590031,2.889207461421,3.09052585858341,4.1719497246936,2.52697211763797,2.78827229879264,3.2066478035633,2.80924522409647,2.88113185821912,2.52716063404698,7.62069906052918,3.59241410429052,2.50781986602817,1.64834360321323,4.41596760403192,1.02860775715625,3.01708870470874,2.38436189947321,2.76158191601424,2.25862512996793,2.45382362885862,1.82927972872773,2.36762740294059,3.53090695999241,5.61142271657738,3.6776855618494,2.56111654176465,1.63692417267876,4.33823155320705,3.08650577569826,4.99621155875892,3.74290573512653,6.44613162144895,4.97349663378993,3.97064554415128,3.01428186306548
|phase1_expression=5.2849119544582,2.79180326111489,3.63999391511629,0.60492842261366,2.00358291978539,4.36486106970913,3.50418960893289,2.45334314538995,1.40788722151667,2.57470978954193,0,0.0797721589953364,2.05440875917447,2.01066925563694,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.548457734422955,0,2.72138528483423,1.19149141441062,0.522399578277871,3.03985603307473,2.98232065387321,1.14846392823004,2.15380998079537,2.37018355954478,4.75058548640935,1.51218077855958,6.65191531965914,0,0,0,0,0.664938581433969,0.408338712524738,2.51118978442145,5.4693474116666,2.09409497589519,0.588231488031014,2.04913645487534,2.42755176515577,12.8414754335089,12.4693625400003,13.5824596599644,6.25913075478431,7.63088047331563,20.4308149943059,19.4429899074283,11.3389001516544,8.62515386189829,0.335565212115473,2.90144856804538,1.00828139742739,41.9332880738594,19.4842739158355,29.9089813520917,6.67644320836673,5.81890077199236,6.33831403506179,28.8017852258762,20.4537803105562,39.1456377017409,46.4767190406478,41.2078466668738,27.5632101676932,22.6688800139717,9.33206510776299,9.45041568321835,8.62332341540666,7.7125765789027,6.40518768759679,5.75706756310284,6.22995561618536,4.5960939330501,12.1127469099328,11.4918604276669,11.2132769277058,6.85808696197008,9.42322729104819,7.8137005583514,8.93385596804419,5.06486349028512,10.3902808488231,8.54422897873636,7.26095572075425,6.71038004971082,31.1991916532718,32.420199285811,8.98579914975201,0.860423876981386,4.0798280022465,0.539703191637817,0.649776417447669,0,1.26399978118577,8.18065548374677,13.5088722393492,11.6602059588412,3.23939865486365,6.41632387071589,5.09610479413291,0,37.0199680129176,41.5510179379162,58.6408356217149,0.79928715803342,1.03575153458869,0.742210695324124,6.7659277438793,13.0920155674221,15.4512383161559,13.7157602902887,9.17191915658498,2.63899841792318,3.46072954828123,0.86759614151947,0,2.42650274921114,1.10420759230197,0.969750506270444,1.86391761218122,2.34224637609238,3.77004072264219,0.766371165625774,4.79260498023681,1.79970819298022,3.43089613097275,3.44518470631092,9.60751265919116,9.80103946480342,8.34356736922927,7.92717917724025,10.389402227978,6.48965052271031,2.13862664085664,1.36847667671102,0,2.52530227063769,1.04096354370163,2.06911893990126,2.88099407688559,2.86339153887859,2.31324097114515,3.20284300712124,2.06143794031403,3.3631438196072,2.37124792226126,1.70195472151037,0.879755620819744,1.97276159184817,2.78047249225598,6.61679116392116,3.90986059175093,1.79130840136644,2.80885274925294,2.83082697826187,2.84163499395593,1.03562886267751,1.64168241986767,2.52086886045421,2.60419209143731,0.393528463494808,1.69693824176116,1.39520366850245,2.41446061259657,1.28441876603886,0.822799249567402,0.656669856316381,1.29710095273369,1.31579988682799,0.439100230582101,1.07365135008297,6.30869845692382,15.5385964692719,0.991256348951394,1.05780226665418,1.70630600428187,1.62565670302307,2.44848176511977,1.61346819698674,0.889512175379481,1.33157938278791,0.474529061544512,2.47048432086016,1.25667604400135,2.38747766449381,1.9496408711912,0.898819408654221,0.864552199498777,1.39398891278057,2.84501851429623,0.913988100877831,1.1270773567308,1.22190796707189,1.16371492300575,1.1221731182451,1.07502113111237,0.295220295959204,0.31399745568275,0.370191491765402,0.592905254174298,0.500535317148282,0,0.674586337154561,0.608580364165509,0.482354319504834,1.2731292589071,1.15078454980324,0.972811360650212,0.274561413188081,2.87536413054709,1.11642284300551,0.936113019343682,0.252578877947112,0,0.482443521363367,0.923765950833023,0.947457058852424,1.14075483509418,1.52770577197669,1.64283173801951,1.34005005953453,1.19021820443007,3.70753930929818,1.7339865851681,3.98636441367795,2.07291199254733,1.80249646187312,1.03610989119537,1.59113964439663,55.7927750575307,26.1074728232981,0.983528546038072,1.37968373152366,11.8807436590966,11.1351102262593,13.4426655208874,1.76729649043061,7.2566890465739,5.46614242015294,7.32439552291516,10.7535959078648,9.58034298554295,12.1722908239198,14.9779959619711,15.1973046113882,10.6727700045561,19.6006003017302,2.2710413633323,1.6025904330053,1.14020871547503,2.8044920905331,0,1.21390318077491,0.906970670894253,0.565815239267694,0.590603785761546,0.307435147943927,2.06742634534577,0.727067458955011,1.06949213515416,0.948110273807448,0,1.03135543248187,0.340439605753788,1.08036656418786,1.81102157295856,1.28602221018955,1.24138163549592,2.67553226403106,1.15184314421485,2.13125464380219,5.39744928546534,4.02480934641258,1.32317038832977,8.244312647074,11.3025098687134,5.48847616846218,10.3853939282729,4.59594519286172,1.7488850197791,15.7611506708933,1.02522528478712,1.23832120777933,0.370389054739423,0.376736914009382,0.956859594047176,0,3.56954702987096,3.07893195112048,2.3493995546752,3.81868247206045,1.73984796469624,1.62655573701479,2.70013352054503,3.55450103224597,3.27543845619266,4.5853877770839,3.71940550764012,6.28214260761671,1.8146096260851,3.10669656543463,0.56369293868419,1.34564891439581,1.32366792365678,2.13896307178452,2.32487682259916,2.02747350588934,2.46450201156083,1.0416350787516,0.629156066554265,0,0,0.948033361884535,0.608175645870493,0.616265742988964,0.909445760844565,0.716106782669926,0.79472541912506,0.480781798079875,1.03382669022204,1.61546319917036,0.304827226619999,0.504130925684203,0.584747284438515,0.769694733122636,0.584384510907845,11.5632495643758,5.32766288097755,9.06109951755704,10.2409615982088,5.79568782096571,12.1993609043268,4.94509385521616,15.4345232936927,1.00314420807073,9.60078132449013,12.889106622201,11.4579102687879,8.07709957015332,11.6464028361009,8.3093328712867,11.4753825039407,7.20513925158753,7.25027854374727,6.21312374102184,2.17953429926771,1.19707462020309,3.24393850932855,2.43106717068294,2.51535795153579,4.04455718590031,2.889207461421,3.09052585858341,4.1719497246936,2.52697211763797,2.78827229879264,3.2066478035633,2.80924522409647,2.88113185821912,2.52716063404698,7.62069906052918,3.59241410429052,2.50781986602817,1.64834360321323,4.41596760403192,1.02860775715625,3.01708870470874,2.38436189947321,2.76158191601424,2.25862512996793,2.45382362885862,1.82927972872773,2.36762740294059,3.53090695999241,5.61142271657738,3.6776855618494,2.56111654176465,1.63692417267876,4.33823155320705,3.08650577569826,4.99621155875892,3.74290573512653,6.44613162144895,4.97349663378993,3.97064554415128,3.01428186306548
|short_description=p3@Rtn4
}}
}}

Latest revision as of 06:19, 27 September 2015

Short description:p3@Rtn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rtn4_5end
Coexpression cluster:NA
Association with transcript: 86bp_to_ENSMUST00000078830, ENSMUST00000102842, ENSMUST00000102843_5end
EntrezGene:Rtn4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rtn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.43
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C141.93
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.91
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C628.80
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C739.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E746.48
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.21
Mouse Microglia, donor1.CNhs12629.11718-123C827.56
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D931.20
Mouse Schwann, donor2.CNhs12573.11746-123F932.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G358.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D613.09
adrenal gland, embryo E17.CNhs11043.1263-45I115.45
adrenal gland, embryo E18.CNhs11026.1262-18F513.72
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F19.80
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G115.54
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A155.79
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.11
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C211.88
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G411.30
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I510.39
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C915.76
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A93.72
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.24
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F512.20
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D515.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.77e-1643
ectodermal cell1.99e-1644
neurectodermal cell1.99e-1644
embryonic cell1.79e-1570
electrically responsive cell6.99e-1539
electrically active cell6.99e-1539
neuron2.03e-1133
neuronal stem cell2.03e-1133
neuroblast2.03e-1133
electrically signaling cell2.03e-1133
CNS neuron (sensu Vertebrata)8.06e-0823
neuroblast (sensu Vertebrata)8.06e-0823
stem cell2.09e-0797

Uber anatomy
Ontology termp-valuen
nervous system3.58e-2175
ectoderm-derived structure5.19e-2195
ectoderm5.19e-2195
presumptive ectoderm5.19e-2195
central nervous system8.00e-2073
gray matter2.00e-1234
regional part of nervous system6.91e-1254
ecto-epithelium1.64e-1173
neural tube4.34e-1152
neural rod4.34e-1152
future spinal cord4.34e-1152
neural keel4.34e-1152
brain grey matter4.86e-1129
regional part of telencephalon4.86e-1129
telencephalon4.86e-1129
neurectoderm9.60e-1164
neural plate9.60e-1164
presumptive neural plate9.60e-1164
brain1.10e-0947
future brain1.10e-0947
structure with developmental contribution from neural crest1.77e-0992
regional part of brain3.52e-0946
cerebral cortex1.81e-0821
cerebral hemisphere1.81e-0821
pallium1.81e-0821
anterior neural tube5.90e-0840
regional part of forebrain6.53e-0839
forebrain6.53e-0839
future forebrain6.53e-0839
regional part of cerebral cortex4.19e-0717
pre-chordal neural plate5.49e-0749
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