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FFCP PHASE1:Mm9::chr6:48658128..48658158,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:48658128..48658158,-
|DHSsupport=NA
|short_description=p3@Gimap6
|DPIdataset=NA
|description=CAGE_peak_3_at_Gimap6_5end
|association_with_transcript=38bp_to_ENSMUST00000126422_5end
|EntrezGene=231931
|EntrezGene=231931
|HGNC=
|HGNC=
|MCL_coexpression_id=231
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=38bp_to_ENSMUST00000126422_5end
|cluster_id=chr6:48658128..48658158,-
|description=CAGE_peak_3_at_Gimap6_5end
|id=chr6:48658128..48658158,-
|ontology_enrichment_celltype=CL:0000838!7.93e-08!12;CL:0000791!1.30e-07!9;CL:0000789!1.30e-07!9;CL:0002420!1.30e-07!9;CL:0002419!1.30e-07!9;CL:0000790!1.30e-07!9;CL:0000542!1.86e-07!13;CL:0000051!1.86e-07!13;CL:0000084!3.67e-07!11;CL:0000827!3.67e-07!11;CL:0000624!6.30e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,1.79e-16,9;CL:0000789,1.79e-16,9;CL:0002420,1.79e-16,9;CL:0002419,1.79e-16,9;CL:0000790,1.79e-16,9;CL:0000624,8.59e-15,8;CL:0000838,1.13e-14,12;CL:0000542,2.40e-13,13;CL:0000051,2.40e-13,13;CL:0000084,4.46e-13,11;CL:0000827,4.46e-13,11;CL:0002031,7.85e-12,25;CL:0000988,1.77e-11,32;CL:0002032,1.77e-11,32;CL:0000037,1.77e-11,32;CL:0000837,1.77e-11,32;CL:0000893,2.44e-11,6;CL:0002489,2.44e-11,6;CL:0000898,2.44e-11,6;CL:0000809,2.44e-11,6;CL:0000810,2.44e-11,6;CL:0000895,2.44e-11,6;CL:0000808,2.44e-11,6;CL:0000894,2.44e-11,6;CL:0000806,2.44e-11,6;CL:0000807,2.44e-11,6;CL:0000805,2.44e-11,6;CL:0002425,2.44e-11,6;CL:0002436,2.44e-11,6;CL:0002427,2.44e-11,6;CL:0002428,2.44e-11,6;CL:0002429,2.44e-11,6;CL:0002433,2.44e-11,6;CL:0002431,2.44e-11,6;CL:0002432,2.44e-11,6;CL:0000738,1.29e-09,17;CL:0002087,1.29e-09,17;CL:0002320,5.47e-09,46;CL:0000134,5.47e-09,46;CL:0000219,5.75e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!2.55e-10!193;UBERON:0004120!2.55e-10!193;UBERON:0006603!2.55e-10!193;UBERON:0009569!3.07e-10!66;UBERON:0003104!1.51e-09!131;UBERON:0009142!1.51e-09!131;UBERON:0001041!7.47e-08!92;UBERON:0004177!8.66e-08!29;UBERON:0001004!8.75e-08!42;UBERON:0005172!1.27e-07!49;UBERON:0005173!1.27e-07!49;UBERON:0002417!1.27e-07!49;UBERON:0000916!1.27e-07!49;UBERON:0000065!1.47e-07!41;UBERON:0005177!2.47e-07!85;UBERON:0000077!4.28e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0009569,6.42e-11,66;UBERON:0002113,5.72e-10,14;UBERON:0003918,5.72e-10,14;UBERON:0011143,5.72e-10,14;UBERON:0005095,5.72e-10,14;UBERON:0007687,5.72e-10,14;UBERON:0002384,5.47e-09,46;UBERON:0005177,7.83e-09,79;UBERON:0000065,8.49e-08,41;UBERON:0001004,1.62e-07,42;UBERON:0002048,2.44e-07,14;UBERON:0000117,2.44e-07,14;UBERON:0000171,2.44e-07,14;UBERON:0000170,2.44e-07,14;UBERON:0005597,2.44e-07,14;UBERON:0000118,2.44e-07,14;UBERON:0006554,2.75e-07,18;UBERON:0002100,5.87e-07,90;UBERON:0001008,8.49e-07,19
|phase1_expression=0.160148847104794,0,0,0,0,0,0,20.5306084272106,50.261573808145,25.5130333690973,2.05461561870606,1.67521533890206,44.5121897821135,29.7229368224591,0.333109761815663,0.202475267389826,1.39912375625629,6.94016763788123,7.54129384831563,6.36584477697045,0.680346321208558,0.397163804803541,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.751478060388,34.8173828165445,19.1573465511204,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.302904773332736,0.0755715601067855,29.8560423362728,3.44169550792555,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,1.55362730188303,0.742210695324124,0.867426633830679,0.913396434936424,0.461230994512117,0.301445281105245,1.76383060703557,1.0053327306374,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0,0,0.292780797011547,0,0,15.3363359367578,0.599902730993408,6.22644112658017,0.149790639404823,0,0,0,0,0,0.162241263067758,1.32391173005411,0.622034853050465,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0,1.28441876603886,0.658239399653922,2.13417703302824,0.891756905004413,0.730999937126662,0.878200461164203,1.74468344388483,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.80673409849337,0.444756087689741,0,0,0,0.754005626400808,0.397912944082302,0,0.898819408654221,0.216138049874694,0.199141273254367,2.0863469104839,1.25673363870702,1.1270773567308,2.24016460629846,0.581857461502877,2.66516115583211,2.08680572510049,1.77132177575523,1.72698600625512,1.60416313098341,0.592905254174298,0.333690211432188,0,0,0.405720242777006,0.482354319504834,0,0,0.972811360650212,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0,1.92977408545347,1.84753190166605,0.189491411770485,1.30371981153621,0.678980343100753,0,1.34005005953453,0.714130922658041,1.36593553500459,1.10344600874334,1.55025282754142,1.2756381492599,0.81931657357869,1.55416483679306,1.44649058581512,0,0,0,0.551873492609465,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0,0.807322133479528,0.241251699712623,0.119372344003136,0.164140899745061,0.582961673259701,0,1.02522528478712,0.82554747185289,0.740778109478847,0.941842285023455,0.683471138605126,0.915112692826091,52.0133995781197,45.9040763621598,47.6789909625262,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0,0.404593039154462,0.661227645802687,0,0.259229946583586,0.621339313086926,0,0.747582730219894,0.330916980914195,0.388902376688095,0.258319646955462,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.948033361884535,0.405450430580328,0.102710957164827,0.129920822977795,0.537080087002444,0.79472541912506,0.841368146639782,0.443068581523732,0.807731599585181,0.838274873204998,0.705783295957884,0.877120926657772,1.53938946624527,2.22066114144981,0,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.192075457214608,0.402048282689293,0,0.231768651889711,0,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0.238436189947321,0.581385666529314,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.679020569229309,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.859484216193193,0.382576664137687,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,20.5306084272106,50.261573808145,25.5130333690973,2.05461561870606,1.67521533890206,44.5121897821135,29.7229368224591,0.333109761815663,0.202475267389826,1.39912375625629,6.94016763788123,7.54129384831563,6.36584477697045,0.680346321208558,0.397163804803541,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.751478060388,34.8173828165445,19.1573465511204,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.302904773332736,0.0755715601067855,29.8560423362728,3.44169550792555,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,1.55362730188303,0.742210695324124,0.867426633830679,0.913396434936424,0.461230994512117,0.301445281105245,1.76383060703557,1.0053327306374,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0,0,0.292780797011547,0,0,15.3363359367578,0.599902730993408,6.22644112658017,0.149790639404823,0,0,0,0,0,0.162241263067758,1.32391173005411,0.622034853050465,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0,1.28441876603886,0.658239399653922,2.13417703302824,0.891756905004413,0.730999937126662,0.878200461164203,1.74468344388483,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.80673409849337,0.444756087689741,0,0,0,0.754005626400808,0.397912944082302,0,0.898819408654221,0.216138049874694,0.199141273254367,2.0863469104839,1.25673363870702,1.1270773567308,2.24016460629846,0.581857461502877,2.66516115583211,2.08680572510049,1.77132177575523,1.72698600625512,1.60416313098341,0.592905254174298,0.333690211432188,0,0,0.405720242777006,0.482354319504834,0,0,0.972811360650212,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0,1.92977408545347,1.84753190166605,0.189491411770485,1.30371981153621,0.678980343100753,0,1.34005005953453,0.714130922658041,1.36593553500459,1.10344600874334,1.55025282754142,1.2756381492599,0.81931657357869,1.55416483679306,1.44649058581512,0,0,0,0.551873492609465,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0,0.807322133479528,0.241251699712623,0.119372344003136,0.164140899745061,0.582961673259701,0,1.02522528478712,0.82554747185289,0.740778109478847,0.941842285023455,0.683471138605126,0.915112692826091,52.0133995781197,45.9040763621598,47.6789909625262,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0,0.404593039154462,0.661227645802687,0,0.259229946583586,0.621339313086926,0,0.747582730219894,0.330916980914195,0.388902376688095,0.258319646955462,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.948033361884535,0.405450430580328,0.102710957164827,0.129920822977795,0.537080087002444,0.79472541912506,0.841368146639782,0.443068581523732,0.807731599585181,0.838274873204998,0.705783295957884,0.877120926657772,1.53938946624527,2.22066114144981,0,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.192075457214608,0.402048282689293,0,0.231768651889711,0,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0.238436189947321,0.581385666529314,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.679020569229309,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.859484216193193,0.382576664137687,0.220591419119515,0.695603506861264
|short_description=p3@Gimap6
}}
}}

Latest revision as of 07:38, 27 September 2015

Short description:p3@Gimap6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gimap6_5end
Coexpression cluster:MCL_coexpression_mm9:231
Association with transcript: 38bp_to_ENSMUST00000126422_5end
EntrezGene:Gimap6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gimap6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E750.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.75
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.82
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.16
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.23
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C652.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C945.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D347.68
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.79e-169
alpha-beta T cell1.79e-169
immature T cell1.79e-169
mature T cell1.79e-169
immature alpha-beta T cell1.79e-169
CD4-positive, alpha-beta T cell8.59e-158
lymphoid lineage restricted progenitor cell1.13e-1412
lymphocyte2.40e-1313
common lymphoid progenitor2.40e-1313
T cell4.46e-1311
pro-T cell4.46e-1311
hematopoietic lineage restricted progenitor cell7.85e-1225
hematopoietic cell1.77e-1132
hematopoietic oligopotent progenitor cell1.77e-1132
hematopoietic stem cell1.77e-1132
hematopoietic multipotent progenitor cell1.77e-1132
thymocyte2.44e-116
double negative thymocyte2.44e-116
naive T cell2.44e-116
double-positive, alpha-beta thymocyte2.44e-116
CD4-positive, alpha-beta thymocyte2.44e-116
naive thymus-derived CD4-positive, alpha-beta T cell2.44e-116
DN4 thymocyte2.44e-116
DN1 thymic pro-T cell2.44e-116
DN2 thymocyte2.44e-116
DN3 thymocyte2.44e-116
immature single positive thymocyte2.44e-116
early T lineage precursor2.44e-116
mature CD4 single-positive thymocyte2.44e-116
resting double-positive thymocyte2.44e-116
double-positive blast2.44e-116
CD69-positive double-positive thymocyte2.44e-116
CD69-positive, CD4-positive single-positive thymocyte2.44e-116
CD4-positive, CD8-intermediate double-positive thymocyte2.44e-116
CD24-positive, CD4 single-positive thymocyte2.44e-116
leukocyte1.29e-0917
nongranular leukocyte1.29e-0917
connective tissue cell5.47e-0946
mesenchymal cell5.47e-0946
motile cell5.75e-0754

Uber anatomy
Ontology termp-valuen
subdivision of trunk6.42e-1166
kidney5.72e-1014
kidney mesenchyme5.72e-1014
upper urinary tract5.72e-1014
kidney rudiment5.72e-1014
kidney field5.72e-1014
connective tissue5.47e-0946
trunk region element7.83e-0979
respiratory tract8.49e-0841
respiratory system1.62e-0742
lung2.44e-0714
respiratory tube2.44e-0714
respiration organ2.44e-0714
pair of lungs2.44e-0714
lung primordium2.44e-0714
lung bud2.44e-0714
urinary system structure2.75e-0718
trunk5.87e-0790
renal system8.49e-0719
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