FFCP PHASE1:Mm9::chr18:57292706..57292717,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70417|HGNC=|MCL_coexpression_id=1165|UniProt=Q6DIB5|association_with_transcript=-26bp_to_ENSMUST00000075770,NM_001001979,uc008eyz.2_5end|description=CAGE_peak_10_at_Megf10_5end|id=chr18:57292706..57292717,+|ontology_enrichment_celltype=CL:0000221!4.76e-24!44;CL:0000133!4.76e-24!44;CL:0002319!3.25e-23!43;CL:0000055!8.09e-20!50;CL:0000540!5.30e-18!33;CL:0000047!5.30e-18!33;CL:0000031!5.30e-18!33;CL:0000404!5.30e-18!33;CL:0000393!2.00e-15!39;CL:0000211!2.00e-15!39;CL:0002321!2.51e-12!70;CL:0000220!2.51e-12!70;CL:0000117!9.58e-11!23;CL:0000337!9.58e-11!23;CL:0000107!2.14e-08!9|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-26,44;CL:0000133,1.06e-26,44;CL:0002319,4.51e-25,43;CL:0000540,8.19e-21,33;CL:0000047,8.19e-21,33;CL:0000031,8.19e-21,33;CL:0000404,8.19e-21,33;CL:0002321,5.65e-19,70;CL:0000393,5.86e-19,39;CL:0000211,5.86e-19,39;CL:0000107,2.27e-18,9;CL:0000117,1.70e-08,23;CL:0000337,1.70e-08,23;CL:0002610,1.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.81e-32!102;UBERON:0000924!6.81e-32!102;UBERON:0006601!6.81e-32!102;UBERON:0000073!3.17e-30!75;UBERON:0001016!3.17e-30!75;UBERON:0001017!2.46e-28!73;UBERON:0005743!2.46e-28!73;UBERON:0002346!2.32e-20!71;UBERON:0003075!2.32e-20!71;UBERON:0007284!2.32e-20!71;UBERON:0000033!4.33e-17!63;UBERON:0000955!4.05e-14!50;UBERON:0006238!4.05e-14!50;UBERON:0002616!2.08e-13!49;UBERON:0001049!2.59e-13!52;UBERON:0005068!2.59e-13!52;UBERON:0006241!2.59e-13!52;UBERON:0007135!2.59e-13!52;UBERON:0003056!1.71e-11!49;UBERON:0002020!2.97e-10!34;UBERON:0000010!3.69e-10!11;UBERON:0007811!5.93e-10!86;UBERON:0000153!3.74e-09!94;UBERON:0002791!4.17e-09!29;UBERON:0003528!4.17e-09!29;UBERON:0001893!4.17e-09!29;UBERON:0003080!9.04e-09!40;UBERON:0002410!2.14e-08!9;UBERON:0002780!3.18e-08!39;UBERON:0001890!3.18e-08!39;UBERON:0006240!3.18e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.76e-33,75;UBERON:0001017,7.38e-30,73;UBERON:0004121,9.38e-28,95;UBERON:0000924,9.38e-28,95;UBERON:0006601,9.38e-28,95;UBERON:0000010,1.04e-22,11;UBERON:0002410,2.27e-18,9;UBERON:0000073,1.57e-11,54;UBERON:0002346,2.41e-11,64;UBERON:0003075,2.41e-11,64;UBERON:0007284,2.41e-11,64;UBERON:0010371,2.09e-10,73;UBERON:0003076,4.54e-10,12;UBERON:0003057,4.54e-10,12;UBERON:0011216,4.88e-10,194;UBERON:0001049,1.93e-09,52;UBERON:0005068,1.93e-09,52;UBERON:0006241,1.93e-09,52;UBERON:0007135,1.93e-09,52;UBERON:0004733,7.60e-09,6;UBERON:0004732,7.60e-09,6;UBERON:0002028,7.60e-09,6;UBERON:0007277,7.60e-09,6;UBERON:0000955,1.94e-08,47;UBERON:0006238,1.94e-08,47;UBERON:0010314,4.84e-08,92;UBERON:0010313,1.06e-07,3;UBERON:0002342,1.06e-07,3;UBERON:0002005,1.06e-07,3;UBERON:0005428,1.06e-07,3;UBERON:0005062,1.06e-07,3;UBERON:0002616,1.81e-07,46;UBERON:0004684,1.93e-07,3;UBERON:0002275,1.93e-07,3;UBERON:0000013,3.63e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.30815093828268,0.878744730937887,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,3.08711323243136,0,0,0.606949382578793,1.5869729378161,3.80298842103708,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,1.24427534770173,0.945041568321835,1.05162480675691,0,0.441737081903227,0.367472397644862,0.287536413054709,0.919218786610021,4.40463523997555,1.53224805702225,1.84327839907492,0.791317726381163,0.365950574409639,1.04182674111352,1.11673199600552,0,0.61119299110724,1.17851434189467,1.28134512719193,0.372798891650601,7.42116694665204,3.09843396437821,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,1.83096445709685,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.940709657085638,0,0,0,0,0.485300549842228,0,0.484875253135222,0,1.17112318804619,3.35114730901528,0.255457055208591,0,0,0,1.3481157546434,1.37250180845588,0.251308704225729,0.695297280769106,0.767146371990992,1.87009240103604,0.973447578406546,0,0.373220911830279,0,0.420883711772948,0.910843100738926,0,0.720248519221397,0.452114453507145,0.408218994907967,0.640568601424249,0.562210347358373,1.03481348295606,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,1.47202963994889,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.502518772325447,0.714130922658041,0,0.472905432318573,0,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,2.10981035865966,0,0,1.57754109708128,3.51394869866975,3.44677436372478,1.67278158566786,1.11399337041197,1.69845918473299,2.02405350837447,3.21481443702443,1.18586333383957,1.92792789853084,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.515559547031063,1.37016503954128,0.755393897389701,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,1.19707462020309,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.505394423527595,0.760437899670719,0.565879024158229,0,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0.715308569841963,0,0.376437521661322,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0.231867835620421|short_description=p10@Megf10}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70417 | |||
|HGNC= | |||
|MCL_coexpression_id=1165 | |||
|TSSclassifier=NA | |||
|UniProt=Q6DIB5 | |||
|association_with_transcript=-26bp_to_ENSMUST00000075770,NM_001001979,uc008eyz.2_5end | |||
|cluster_id=chr18:57292706..57292717,+ | |||
|description=CAGE_peak_10_at_Megf10_5end | |||
|id=chr18:57292706..57292717,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.76e-24!44;CL:0000133!4.76e-24!44;CL:0002319!3.25e-23!43;CL:0000055!8.09e-20!50;CL:0000540!5.30e-18!33;CL:0000047!5.30e-18!33;CL:0000031!5.30e-18!33;CL:0000404!5.30e-18!33;CL:0000393!2.00e-15!39;CL:0000211!2.00e-15!39;CL:0002321!2.51e-12!70;CL:0000220!2.51e-12!70;CL:0000117!9.58e-11!23;CL:0000337!9.58e-11!23;CL:0000107!2.14e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-26,44;CL:0000133,1.06e-26,44;CL:0002319,4.51e-25,43;CL:0000540,8.19e-21,33;CL:0000047,8.19e-21,33;CL:0000031,8.19e-21,33;CL:0000404,8.19e-21,33;CL:0002321,5.65e-19,70;CL:0000393,5.86e-19,39;CL:0000211,5.86e-19,39;CL:0000107,2.27e-18,9;CL:0000117,1.70e-08,23;CL:0000337,1.70e-08,23;CL:0002610,1.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.81e-32!102;UBERON:0000924!6.81e-32!102;UBERON:0006601!6.81e-32!102;UBERON:0000073!3.17e-30!75;UBERON:0001016!3.17e-30!75;UBERON:0001017!2.46e-28!73;UBERON:0005743!2.46e-28!73;UBERON:0002346!2.32e-20!71;UBERON:0003075!2.32e-20!71;UBERON:0007284!2.32e-20!71;UBERON:0000033!4.33e-17!63;UBERON:0000955!4.05e-14!50;UBERON:0006238!4.05e-14!50;UBERON:0002616!2.08e-13!49;UBERON:0001049!2.59e-13!52;UBERON:0005068!2.59e-13!52;UBERON:0006241!2.59e-13!52;UBERON:0007135!2.59e-13!52;UBERON:0003056!1.71e-11!49;UBERON:0002020!2.97e-10!34;UBERON:0000010!3.69e-10!11;UBERON:0007811!5.93e-10!86;UBERON:0000153!3.74e-09!94;UBERON:0002791!4.17e-09!29;UBERON:0003528!4.17e-09!29;UBERON:0001893!4.17e-09!29;UBERON:0003080!9.04e-09!40;UBERON:0002410!2.14e-08!9;UBERON:0002780!3.18e-08!39;UBERON:0001890!3.18e-08!39;UBERON:0006240!3.18e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.76e-33,75;UBERON:0001017,7.38e-30,73;UBERON:0004121,9.38e-28,95;UBERON:0000924,9.38e-28,95;UBERON:0006601,9.38e-28,95;UBERON:0000010,1.04e-22,11;UBERON:0002410,2.27e-18,9;UBERON:0000073,1.57e-11,54;UBERON:0002346,2.41e-11,64;UBERON:0003075,2.41e-11,64;UBERON:0007284,2.41e-11,64;UBERON:0010371,2.09e-10,73;UBERON:0003076,4.54e-10,12;UBERON:0003057,4.54e-10,12;UBERON:0011216,4.88e-10,194;UBERON:0001049,1.93e-09,52;UBERON:0005068,1.93e-09,52;UBERON:0006241,1.93e-09,52;UBERON:0007135,1.93e-09,52;UBERON:0004733,7.60e-09,6;UBERON:0004732,7.60e-09,6;UBERON:0002028,7.60e-09,6;UBERON:0007277,7.60e-09,6;UBERON:0000955,1.94e-08,47;UBERON:0006238,1.94e-08,47;UBERON:0010314,4.84e-08,92;UBERON:0010313,1.06e-07,3;UBERON:0002342,1.06e-07,3;UBERON:0002005,1.06e-07,3;UBERON:0005428,1.06e-07,3;UBERON:0005062,1.06e-07,3;UBERON:0002616,1.81e-07,46;UBERON:0004684,1.93e-07,3;UBERON:0002275,1.93e-07,3;UBERON:0000013,3.63e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.30815093828268,0.878744730937887,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,3.08711323243136,0,0,0.606949382578793,1.5869729378161,3.80298842103708,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,1.24427534770173,0.945041568321835,1.05162480675691,0,0.441737081903227,0.367472397644862,0.287536413054709,0.919218786610021,4.40463523997555,1.53224805702225,1.84327839907492,0.791317726381163,0.365950574409639,1.04182674111352,1.11673199600552,0,0.61119299110724,1.17851434189467,1.28134512719193,0.372798891650601,7.42116694665204,3.09843396437821,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,1.83096445709685,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.940709657085638,0,0,0,0,0.485300549842228,0,0.484875253135222,0,1.17112318804619,3.35114730901528,0.255457055208591,0,0,0,1.3481157546434,1.37250180845588,0.251308704225729,0.695297280769106,0.767146371990992,1.87009240103604,0.973447578406546,0,0.373220911830279,0,0.420883711772948,0.910843100738926,0,0.720248519221397,0.452114453507145,0.408218994907967,0.640568601424249,0.562210347358373,1.03481348295606,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,1.47202963994889,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.502518772325447,0.714130922658041,0,0.472905432318573,0,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,2.10981035865966,0,0,1.57754109708128,3.51394869866975,3.44677436372478,1.67278158566786,1.11399337041197,1.69845918473299,2.02405350837447,3.21481443702443,1.18586333383957,1.92792789853084,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.515559547031063,1.37016503954128,0.755393897389701,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,1.19707462020309,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.505394423527595,0.760437899670719,0.565879024158229,0,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0.715308569841963,0,0.376437521661322,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p10@Megf10 | |||
}} |
Latest revision as of 12:21, 1 October 2015
Short description: | p10@Megf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Megf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1165 |
Association with transcript: | -26bp_to_ENSMUST00000075770, NM_001001979, uc008eyz.2_5end |
EntrezGene: | Megf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.06e-26 | 44 |
neurectodermal cell | 1.06e-26 | 44 |
neural cell | 4.51e-25 | 43 |
neuron | 8.19e-21 | 33 |
neuronal stem cell | 8.19e-21 | 33 |
neuroblast | 8.19e-21 | 33 |
electrically signaling cell | 8.19e-21 | 33 |
embryonic cell | 5.65e-19 | 70 |
electrically responsive cell | 5.86e-19 | 39 |
electrically active cell | 5.86e-19 | 39 |
autonomic neuron | 2.27e-18 | 9 |
CNS neuron (sensu Vertebrata) | 1.70e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-08 | 23 |
raphe nuclei neuron | 1.93e-07 | 3 |