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FFCP PHASE1:Mm9::chr3:117278437..117278452,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:117278437..117278452,+
|DHSsupport=NA
|short_description=p1@4833424O15Rik
|DPIdataset=NA
|description=CAGE_peak_1_at_4833424O15Rik_5end
|association_with_transcript=58bp_to_NM_029425,uc008rda.2,uc008rdb.2_5end
|EntrezGene=75769
|EntrezGene=75769
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BJ52
|UniProt=Q8BJ52
|association_with_transcript=58bp_to_NM_029425,uc008rda.2,uc008rdb.2_5end
|cluster_id=chr3:117278437..117278452,+
|description=CAGE_peak_1_at_4833424O15Rik_5end
|id=chr3:117278437..117278452,+
|ontology_enrichment_celltype=CL:0000540!8.46e-14!33;CL:0000047!8.46e-14!33;CL:0000031!8.46e-14!33;CL:0000404!8.46e-14!33;CL:0000221!6.32e-11!44;CL:0000133!6.32e-11!44;CL:0002319!9.47e-11!43;CL:0000117!1.27e-09!23;CL:0000337!1.27e-09!23;CL:0000393!2.04e-09!39;CL:0000211!2.04e-09!39;CL:0000055!6.86e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.90e-16,33;CL:0000047,7.90e-16,33;CL:0000031,7.90e-16,33;CL:0000404,7.90e-16,33;CL:0002319,2.88e-13,43;CL:0000221,8.55e-13,44;CL:0000133,8.55e-13,44;CL:0000393,2.53e-12,39;CL:0000211,2.53e-12,39;CL:0000117,3.58e-12,23;CL:0000337,3.58e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.60e-24!73;UBERON:0005743!4.60e-24!73;UBERON:0000073!1.04e-23!75;UBERON:0001016!1.04e-23!75;UBERON:0004121!6.31e-23!102;UBERON:0000924!6.31e-23!102;UBERON:0006601!6.31e-23!102;UBERON:0002346!1.18e-20!71;UBERON:0003075!1.18e-20!71;UBERON:0007284!1.18e-20!71;UBERON:0000033!5.63e-18!63;UBERON:0003056!4.24e-16!49;UBERON:0001049!5.13e-16!52;UBERON:0005068!5.13e-16!52;UBERON:0006241!5.13e-16!52;UBERON:0007135!5.13e-16!52;UBERON:0002020!9.39e-16!34;UBERON:0000955!1.33e-14!50;UBERON:0006238!1.33e-14!50;UBERON:0002616!6.80e-14!49;UBERON:0002791!2.26e-12!29;UBERON:0003528!2.26e-12!29;UBERON:0001893!2.26e-12!29;UBERON:0003080!5.97e-12!40;UBERON:0002780!1.94e-11!39;UBERON:0001890!1.94e-11!39;UBERON:0006240!1.94e-11!39;UBERON:0000956!8.61e-09!21;UBERON:0001869!8.61e-09!21;UBERON:0000203!8.61e-09!21;UBERON:0002619!2.43e-08!17;UBERON:0007811!3.23e-08!86;UBERON:0002021!6.80e-08!10;UBERON:0000411!6.80e-08!10;UBERON:0001950!6.80e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.33e-33,73;UBERON:0004121,7.36e-32,95;UBERON:0000924,7.36e-32,95;UBERON:0006601,7.36e-32,95;UBERON:0001016,1.00e-31,75;UBERON:0002346,3.20e-30,64;UBERON:0003075,3.20e-30,64;UBERON:0007284,3.20e-30,64;UBERON:0010371,7.76e-25,73;UBERON:0000073,8.35e-24,54;UBERON:0002020,1.51e-23,34;UBERON:0001049,7.21e-22,52;UBERON:0005068,7.21e-22,52;UBERON:0006241,7.21e-22,52;UBERON:0007135,7.21e-22,52;UBERON:0003056,2.73e-20,49;UBERON:0010314,3.95e-19,92;UBERON:0003528,1.39e-17,29;UBERON:0002791,1.39e-17,29;UBERON:0001893,1.39e-17,29;UBERON:0000955,8.77e-17,47;UBERON:0006238,8.77e-17,47;UBERON:0002616,1.18e-15,46;UBERON:0002619,1.97e-15,17;UBERON:0003080,5.55e-15,40;UBERON:0002780,3.92e-14,39;UBERON:0001890,3.92e-14,39;UBERON:0006240,3.92e-14,39;UBERON:0000956,1.57e-13,21;UBERON:0001869,1.57e-13,21;UBERON:0000203,1.57e-13,21;UBERON:0002021,2.95e-13,10;UBERON:0000411,2.95e-13,10;UBERON:0001950,2.95e-13,10;UBERON:0002240,1.18e-08,6;UBERON:0005174,1.18e-08,6;UBERON:0001137,1.18e-08,6;UBERON:0003076,9.93e-08,12;UBERON:0003057,9.93e-08,12;UBERON:0001948,1.09e-07,5;UBERON:0002315,1.09e-07,5;UBERON:0011216,2.94e-07,194
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,3.1739458756322,0,0,0,0,0,0,4.19440154725767,4.61061966385865,0.414758449233911,0.135005938331691,0.630974884054146,4.28476476605705,3.53389665522582,1.5923803897944,1.0543001812006,1.83843757322004,2.20231761998777,2.55374676170375,1.99688493233117,2.2420668914133,0.823388792421687,0.52091337055676,1.3959149950069,1.12552522006336,2.75036845998258,6.77645746589436,6.26435395516053,2.60959224155421,0.151452386666368,0.151143120213571,10.1452571045587,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.593768556259299,0,0,1.15307748628029,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.9472783122627,5.03250663100489,3.26701315493447,3.82413504423008,4.09144731728529,3.1168206683934,3.24482526135515,0,0,0,1.26265113531884,1.04096354370163,0.459804208866946,0.540186389416048,1.80845781402858,4.35433594568498,3.33095672740609,4.8724896771059,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,2.27838349789052,0.469052119962192,0.540186184383045,0.473489471170421,0,0.308534225774757,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,5.67782861123144,3.70456604565424,0,0,0,0.232236671860439,0.77320476793256,1.21010114774006,0,0.760902504450237,0.474529061544512,0.658795818896044,1.00534083520108,1.1937388322469,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0.316182685621286,0,0,0,0.592905254174298,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.945810864637146,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,1.60550589987792,1.52375192569864,0,0,1.26203287766503,1.56175497718655,1.29254038639679,1.91175038362042,1.78238939265915,3.96307143104365,0.809621403349789,1.16902343164525,0.790575555893047,17.9939937196212,0.141940085208269,0.534196811001766,0.651547837414304,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.582961673259701,2.22510362412612,0,0,0,0.188368457004691,0.410082683163076,0,0,0,0,0,0.158167996790568,0.813277868507395,1.08005340821801,1.46361807210128,1.31017538247707,0.539457385539283,0.909188012978695,0.523511883968059,0.129614973291793,0,0,0.897099276263873,0.330916980914195,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0,0.966336483304024,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,5.64751842617067,7.36520378411483,9.16632821503035,7.04598047609119,4.7955776383945,3.0215755895588,3.37511250115903,1.80128481289688,2.71885445390523,1.55328093525546,0,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,1.10306105070008,1.11123363900808,1.03017528619447,1.28367683836726,0.758091635291392,1.77435509923168,0.943131706930381,0.561849044819294,0.768301828858431,0.574354689556133,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0,0.581385666529314,0.846984423737976,0.507687647350059,0.548783918618318,0.263069711437843,0.135804113845862,0,0.355905054372522,0.788035859004508,0,0.154936841185966,0.771626443924566,1.74867404556562,0.233931608445408,1.07435527024149,0.191288332068843,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,3.1739458756322,0,0,0,0,0,0,4.19440154725767,4.61061966385865,0.414758449233911,0.135005938331691,0.630974884054146,4.28476476605705,3.53389665522582,1.5923803897944,1.0543001812006,1.83843757322004,2.20231761998777,2.55374676170375,1.99688493233117,2.2420668914133,0.823388792421687,0.52091337055676,1.3959149950069,1.12552522006336,2.75036845998258,6.77645746589436,6.26435395516053,2.60959224155421,0.151452386666368,0.151143120213571,10.1452571045587,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.593768556259299,0,0,1.15307748628029,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.9472783122627,5.03250663100489,3.26701315493447,3.82413504423008,4.09144731728529,3.1168206683934,3.24482526135515,0,0,0,1.26265113531884,1.04096354370163,0.459804208866946,0.540186389416048,1.80845781402858,4.35433594568498,3.33095672740609,4.8724896771059,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,2.27838349789052,0.469052119962192,0.540186184383045,0.473489471170421,0,0.308534225774757,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,5.67782861123144,3.70456604565424,0,0,0,0.232236671860439,0.77320476793256,1.21010114774006,0,0.760902504450237,0.474529061544512,0.658795818896044,1.00534083520108,1.1937388322469,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0.316182685621286,0,0,0,0.592905254174298,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.945810864637146,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,1.60550589987792,1.52375192569864,0,0,1.26203287766503,1.56175497718655,1.29254038639679,1.91175038362042,1.78238939265915,3.96307143104365,0.809621403349789,1.16902343164525,0.790575555893047,17.9939937196212,0.141940085208269,0.534196811001766,0.651547837414304,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.582961673259701,2.22510362412612,0,0,0,0.188368457004691,0.410082683163076,0,0,0,0,0,0.158167996790568,0.813277868507395,1.08005340821801,1.46361807210128,1.31017538247707,0.539457385539283,0.909188012978695,0.523511883968059,0.129614973291793,0,0,0.897099276263873,0.330916980914195,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0,0.966336483304024,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,5.64751842617067,7.36520378411483,9.16632821503035,7.04598047609119,4.7955776383945,3.0215755895588,3.37511250115903,1.80128481289688,2.71885445390523,1.55328093525546,0,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,1.10306105070008,1.11123363900808,1.03017528619447,1.28367683836726,0.758091635291392,1.77435509923168,0.943131706930381,0.561849044819294,0.768301828858431,0.574354689556133,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0,0.581385666529314,0.846984423737976,0.507687647350059,0.548783918618318,0.263069711437843,0.135804113845862,0,0.355905054372522,0.788035859004508,0,0.154936841185966,0.771626443924566,1.74867404556562,0.233931608445408,1.07435527024149,0.191288332068843,0,0.231867835620421
|short_description=p1@4833424O15Rik
}}
}}

Latest revision as of 12:32, 1 October 2015

Short description:p1@4833424O15Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_4833424O15Rik_5end
Coexpression cluster:NA
Association with transcript: 58bp_to_NM_029425, uc008rda.2, uc008rdb.2_5end
EntrezGene:4833424O15Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@4833424O15Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.90e-1633
neuronal stem cell7.90e-1633
neuroblast7.90e-1633
electrically signaling cell7.90e-1633
neural cell2.88e-1343
ectodermal cell8.55e-1344
neurectodermal cell8.55e-1344
electrically responsive cell2.53e-1239
electrically active cell2.53e-1239
CNS neuron (sensu Vertebrata)3.58e-1223
neuroblast (sensu Vertebrata)3.58e-1223

Uber anatomy
Ontology termp-valuen
central nervous system5.33e-3373
ectoderm-derived structure7.36e-3295
ectoderm7.36e-3295
presumptive ectoderm7.36e-3295
nervous system1.00e-3175
neurectoderm3.20e-3064
neural plate3.20e-3064
presumptive neural plate3.20e-3064
ecto-epithelium7.76e-2573
regional part of nervous system8.35e-2454
gray matter1.51e-2334
neural tube7.21e-2252
neural rod7.21e-2252
future spinal cord7.21e-2252
neural keel7.21e-2252
pre-chordal neural plate2.73e-2049
structure with developmental contribution from neural crest3.95e-1992
brain grey matter1.39e-1729
regional part of telencephalon1.39e-1729
telencephalon1.39e-1729
brain8.77e-1747
future brain8.77e-1747
regional part of brain1.18e-1546
regional part of cerebral cortex1.97e-1517
anterior neural tube5.55e-1540
regional part of forebrain3.92e-1439
forebrain3.92e-1439
future forebrain3.92e-1439
cerebral cortex1.57e-1321
cerebral hemisphere1.57e-1321
pallium1.57e-1321
occipital lobe2.95e-1310
visual cortex2.95e-1310
neocortex2.95e-1310
spinal cord1.18e-086
dorsal region element1.18e-086
dorsum1.18e-086
posterior neural tube9.93e-0812
chordal neural plate9.93e-0812
regional part of spinal cord1.09e-075
gray matter of spinal cord1.09e-075
organ system subdivision2.94e-07194
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